RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 FYB2Q5VWT5 728 aa6.89□□□□□ -1.31
CLN5-212ENST00000636602 SETDB2Q96T68 719 aa6.89□□□□□ -1.31
CLN5-212ENST00000636602 WDR18Q9BV38 432 aa6.89□□□□□ -1.31
CLN5-212ENST00000636602 GLI1P08151 1106 aa6.88□□□□□ -1.31
CLN5-212ENST00000636602 AFMP43652 599 aa6.88□□□□□ -1.31
CLN5-212ENST00000636602 ENOX2Q16206 610 aaKnown RBP6.88□□□□□ -1.31
CLN5-212ENST00000636602 ALG1LQ6GMV1 187 aa6.88□□□□□ -1.31
CLN5-212ENST00000636602 RNF19AQ9NV58 838 aa6.88□□□□□ -1.31
CLN5-212ENST00000636602 VTI1BQ9UEU0 232 aa6.88□□□□□ -1.31
CLN5-212ENST00000636602 SCAMP3O14828 347 aaKnown RBP6.87□□□□□ -1.31
CLN5-212ENST00000636602 SORBS3O60504 671 aa6.87□□□□□ -1.31
CLN5-212ENST00000636602 LEFTY1O75610 366 aa6.87□□□□□ -1.31
CLN5-212ENST00000636602 MPZL3Q6UWV2 235 aa6.87□□□□□ -1.31
CLN5-212ENST00000636602 TMC4Q7Z404 712 aa6.87□□□□□ -1.31
CLN5-212ENST00000636602 SNX29Q8TEQ0 813 aa6.87□□□□□ -1.31
CLN5-212ENST00000636602 TNKS2Q9H2K2 1166 aa6.87□□□□□ -1.31
CLN5-212ENST00000636602 SNX11Q9Y5W9 270 aa6.87□□□□□ -1.31
CLN5-212ENST00000636602 NPIPB6E9PJ23 425 aa6.86□□□□□ -1.31
CLN5-212ENST00000636602 TMPRSS2O15393 492 aa6.86□□□□□ -1.31
CLN5-212ENST00000636602 NEFLP07196 543 aa6.86□□□□□ -1.31
CLN5-212ENST00000636602 DAB2P98082 770 aa6.86□□□□□ -1.31
CLN5-212ENST00000636602 ZP2Q05996 745 aa6.86□□□□□ -1.31
CLN5-212ENST00000636602 ORC1Q13415 861 aa6.86□□□□□ -1.31
CLN5-212ENST00000636602 PDE3AQ14432 1141 aa6.86□□□□□ -1.31
CLN5-212ENST00000636602 TMEM87AQ8NBN3 555 aa6.86□□□□□ -1.31
CLN5-212ENST00000636602 DDX54Q8TDD1 881 aaKnown RBP6.86□□□□□ -1.31
CLN5-212ENST00000636602 CSRNP1Q96S65 589 aa6.86□□□□□ -1.31
CLN5-212ENST00000636602 DUSP23Q9BVJ7 150 aa6.86□□□□□ -1.31
CLN5-212ENST00000636602 FOXD3Q9UJU5 478 aaPredicted RBP6.86□□□□□ -1.31
CLN5-212ENST00000636602 LOC105371045A0A1W2PR82 267 aa6.85□□□□□ -1.31
CLN5-212ENST00000636602 ERCC5P28715 1186 aaPredicted RBP6.85□□□□□ -1.31
CLN5-212ENST00000636602 ZC3H6P61129 1189 aaKnown RBP6.85□□□□□ -1.31
CLN5-212ENST00000636602 SPRED3Q2MJR0 410 aa6.85□□□□□ -1.31
CLN5-212ENST00000636602 C9orf131Q5VYM1 1079 aa6.85□□□□□ -1.31
CLN5-212ENST00000636602 FBXO15Q8NCQ5 510 aaPredicted RBP6.85□□□□□ -1.31
CLN5-212ENST00000636602 ASB11Q8WXH4 323 aa6.85□□□□□ -1.31
CLN5-212ENST00000636602 C20orf173Q96LM9 149 aa6.85□□□□□ -1.31
CLN5-212ENST00000636602 PIDD1Q9HB75 910 aa6.85□□□□□ -1.31
CLN5-212ENST00000636602 EIF1AYO14602 144 aaKnown RBP6.84□□□□□ -1.31
CLN5-212ENST00000636602 B3GALT4O96024 378 aa6.84□□□□□ -1.31
CLN5-212ENST00000636602 ITIH2P19823 946 aa6.84□□□□□ -1.31
CLN5-212ENST00000636602 HOXA5P20719 270 aa6.84□□□□□ -1.31
CLN5-212ENST00000636602 GRIA4P48058 902 aa6.84□□□□□ -1.31
CLN5-212ENST00000636602 HDLBPQ00341 1268 aaKnown RBP6.84□□□□□ -1.31
CLN5-212ENST00000636602 IKZF1Q13422 519 aa6.84□□□□□ -1.31
CLN5-212ENST00000636602 CCNJLQ8IV13 435 aa6.84□□□□□ -1.31
CLN5-212ENST00000636602 SMYD4Q8IYR2 804 aaPredicted RBP6.84□□□□□ -1.31
CLN5-212ENST00000636602 FBF1Q8TES7 1133 aa6.84□□□□□ -1.31
CLN5-212ENST00000636602 KIRREL1Q96J84 757 aa6.84□□□□□ -1.31
CLN5-212ENST00000636602 C8orf37Q96NL8 207 aa6.84□□□□□ -1.31
CLN5-212ENST00000636602 FANCD2OSQ96PS1 177 aa6.84□□□□□ -1.31
CLN5-212ENST00000636602 ATXN3LQ9H3M9 355 aa6.84□□□□□ -1.31
CLN5-212ENST00000636602 GNA15P30679 374 aa6.83□□□□□ -1.32
CLN5-212ENST00000636602 TMEM67Q5HYA8 995 aa6.83□□□□□ -1.32
CLN5-212ENST00000636602 LDLRAD1Q5T700 205 aa6.83□□□□□ -1.32
CLN5-212ENST00000636602 CD320Q9NPF0 282 aa6.83□□□□□ -1.32
CLN5-212ENST00000636602 CPNE3O75131 537 aaKnown RBP6.82□□□□□ -1.32
CLN5-212ENST00000636602 TMEM253P0C7T8 217 aa6.82□□□□□ -1.32
CLN5-212ENST00000636602 KCNA10Q16322 511 aa6.82□□□□□ -1.32
CLN5-212ENST00000636602 CIAPIN1Q6FI81 312 aa6.82□□□□□ -1.32
CLN5-212ENST00000636602 RELTQ969Z4 430 aa6.82□□□□□ -1.32
CLN5-212ENST00000636602 TCF12Q99081 682 aa6.82□□□□□ -1.32
CLN5-212ENST00000636602 KRTAP9-8Q9BYQ0 159 aa6.82□□□□□ -1.32
CLN5-212ENST00000636602 DNAJC25Q9H1X3 360 aa6.82□□□□□ -1.32
CLN5-212ENST00000636602 LIG1P18858 919 aa6.81□□□□□ -1.32
CLN5-212ENST00000636602 WDR89Q96FK6 387 aaPredicted RBP6.81□□□□□ -1.32
CLN5-212ENST00000636602 DIRC2Q96SL1 478 aa6.81□□□□□ -1.32
CLN5-212ENST00000636602 NSUN3Q9H649 340 aaKnown RBP6.81□□□□□ -1.32
CLN5-212ENST00000636602 ZFYVE28Q9HCC9 887 aa6.81□□□□□ -1.32
CLN5-212ENST00000636602 DISC1Q9NRI5 854 aa6.81□□□□□ -1.32
CLN5-212ENST00000636602 SPG7Q9UQ90 795 aa6.81□□□□□ -1.32
CLN5-212ENST00000636602 SHROOM4Q9ULL8 1493 aa6.8□□□□□ -1.32
CLN5-212ENST00000636602 A0A1W2PP55 124 aa6.8□□□□□ -1.32
CLN5-212ENST00000636602 ID3Q02535 119 aa6.8□□□□□ -1.32
CLN5-212ENST00000636602 NAALADL2Q58DX5 795 aa6.8□□□□□ -1.32
CLN5-212ENST00000636602 CYFIP1Q7L576 1253 aa6.8□□□□□ -1.32
CLN5-212ENST00000636602 NT5DC4Q86YG4 428 aa6.8□□□□□ -1.32
CLN5-212ENST00000636602 SREK1Q8WXA9 508 aaKnown RBP6.8□□□□□ -1.32
CLN5-212ENST00000636602 HEXIM2Q96MH2 286 aaKnown RBP6.8□□□□□ -1.32
CLN5-212ENST00000636602 FRMD6Q96NE9 622 aa6.8□□□□□ -1.32
CLN5-212ENST00000636602 LIN7BQ9HAP6 207 aa6.8□□□□□ -1.32
CLN5-212ENST00000636602 PCOLCE2Q9UKZ9 415 aa6.8□□□□□ -1.32
CLN5-212ENST00000636602 AK5Q9Y6K8 562 aa6.8□□□□□ -1.32
CLN5-212ENST00000636602 POLR3DP05423 398 aaPredicted RBP6.79□□□□□ -1.32
CLN5-212ENST00000636602 SLFN14P0C7P3 912 aa6.79□□□□□ -1.32
CLN5-212ENST00000636602 MED14OSP0DP75 135 aa6.79□□□□□ -1.32
CLN5-212ENST00000636602 ZNF76P36508 570 aa6.79□□□□□ -1.32
CLN5-212ENST00000636602 FANCCQ00597 558 aa6.79□□□□□ -1.32
CLN5-212ENST00000636602 AP3B2Q13367 1082 aa6.79□□□□□ -1.32
CLN5-212ENST00000636602 TTLL4Q14679 1199 aa6.79□□□□□ -1.32
CLN5-212ENST00000636602 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.79□□□□□ -1.32
CLN5-212ENST00000636602 USPL1Q5W0Q7 1092 aa6.79□□□□□ -1.32
CLN5-212ENST00000636602 ATG14Q6ZNE5 492 aa6.79□□□□□ -1.32
CLN5-212ENST00000636602 TOP6BLQ8N6T0 577 aa6.79□□□□□ -1.32
CLN5-212ENST00000636602 RNF34Q969K3 372 aa6.79□□□□□ -1.32
CLN5-212ENST00000636602 CRELD1Q96HD1 420 aa6.79□□□□□ -1.32
CLN5-212ENST00000636602 METTL5Q9NRN9 209 aaKnown RBP6.79□□□□□ -1.32
CLN5-212ENST00000636602 RNGTTO60942 597 aaKnown RBP6.78□□□□□ -1.32
CLN5-212ENST00000636602 EIF4BP23588 611 aaKnown RBP6.78□□□□□ -1.32
CLN5-212ENST00000636602 FAM214BQ7L5A3 538 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms