RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 DSCC1Q9BVC3 393 aa18.5■□□□□ 0.55
CTSD-207ENST00000636571 DHX36Q9H2U1 1008 aaKnown RBP18.5■□□□□ 0.55
CTSD-207ENST00000636571 INCENPQ9NQS7 918 aa18.5■□□□□ 0.55
CTSD-207ENST00000636571 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.5■□□□□ 0.55
CTSD-207ENST00000636571 PI4KBQ9UBF8 816 aa18.5■□□□□ 0.55
CTSD-207ENST00000636571 PAPPA2Q9BXP8 1791 aa18.5■□□□□ 0.55
CTSD-207ENST00000636571 USP2O75604 605 aaPredicted RBP18.5■□□□□ 0.55
CTSD-207ENST00000636571 SHROOM1Q2M3G4 852 aaPredicted RBP18.5■□□□□ 0.55
CTSD-207ENST00000636571 ARPP21Q9UBL0 812 aaPredicted RBP18.5■□□□□ 0.55
CTSD-207ENST00000636571 LAMA4Q16363 1823 aa18.49■□□□□ 0.55
CTSD-207ENST00000636571 HLA-DOAP06340 250 aa18.49■□□□□ 0.55
CTSD-207ENST00000636571 TTLL12Q14166 644 aaPredicted RBP18.49■□□□□ 0.55
CTSD-207ENST00000636571 ALX1Q15699 326 aa18.49■□□□□ 0.55
CTSD-207ENST00000636571 SBK1Q52WX2 424 aa18.49■□□□□ 0.55
CTSD-207ENST00000636571 TTC6Q86TZ1 520 aa18.49■□□□□ 0.55
CTSD-207ENST00000636571 NBPF3Q9H094 633 aa18.49■□□□□ 0.55
CTSD-207ENST00000636571 ANGEL1Q9UNK9 670 aaKnown RBP18.49■□□□□ 0.55
CTSD-207ENST00000636571 TAF6LQ9Y6J9 622 aa18.49■□□□□ 0.55
CTSD-207ENST00000636571 MYH8P13535 1937 aa18.49■□□□□ 0.55
CTSD-207ENST00000636571 UBE2Q2LH0YL09 131 aa18.48■□□□□ 0.55
CTSD-207ENST00000636571 GABPAQ06546 454 aa18.48■□□□□ 0.55
CTSD-207ENST00000636571 PPARAQ07869 468 aa18.48■□□□□ 0.55
CTSD-207ENST00000636571 CRACR2BQ8N4Y2 399 aaPredicted RBP18.48■□□□□ 0.55
CTSD-207ENST00000636571 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.48■□□□□ 0.553e-9■■■■□ 25.5
CTSD-207ENST00000636571 GBA2Q9HCG7 927 aaPredicted RBP18.48■□□□□ 0.55
CTSD-207ENST00000636571 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.48■□□□□ 0.55
CTSD-207ENST00000636571 SERPINB13Q9UIV8 391 aa18.48■□□□□ 0.55
CTSD-207ENST00000636571 INPP5BP32019 993 aa18.47■□□□□ 0.55
CTSD-207ENST00000636571 NF2P35240 595 aa18.47■□□□□ 0.55
CTSD-207ENST00000636571 HTRA3P83110 453 aa18.47■□□□□ 0.55
CTSD-207ENST00000636571 KIAA1211Q6ZU35 1233 aa18.47■□□□□ 0.55
CTSD-207ENST00000636571 MAP4K1Q92918 833 aa18.47■□□□□ 0.55
CTSD-207ENST00000636571 RBM8AQ9Y5S9 174 aaKnown RBP18.47■□□□□ 0.55
CTSD-207ENST00000636571 PHF20L1A8MW92 1017 aa18.47■□□□□ 0.55
CTSD-207ENST00000636571 PRDM1O75626 825 aa18.47■□□□□ 0.55
CTSD-207ENST00000636571 JAG1P78504 1218 aa18.47■□□□□ 0.55
CTSD-207ENST00000636571 MAP3K10Q02779 954 aa18.47■□□□□ 0.55
CTSD-207ENST00000636571 METTL16Q86W50 562 aaKnown RBP18.47■□□□□ 0.55
CTSD-207ENST00000636571 NKX2-3Q8TAU0 364 aa18.47■□□□□ 0.55
CTSD-207ENST00000636571 ZKSCAN4Q969J2 545 aaPredicted RBP18.47■□□□□ 0.55
CTSD-207ENST00000636571 ATAD5Q96QE3 1844 aa18.46■□□□□ 0.55
CTSD-207ENST00000636571 ZMYM6O95789 1325 aa18.46■□□□□ 0.55
CTSD-207ENST00000636571 SHMT1P34896 483 aa18.46■□□□□ 0.55
CTSD-207ENST00000636571 TBC1D10CQ8IV04 446 aa18.46■□□□□ 0.55
CTSD-207ENST00000636571 FOXP4Q8IVH2 680 aaPredicted RBP18.46■□□□□ 0.55
CTSD-207ENST00000636571 KLRG1Q96E93 195 aa18.46■□□□□ 0.55
CTSD-207ENST00000636571 CLMNQ96JQ2 1002 aa18.46■□□□□ 0.55
CTSD-207ENST00000636571 WRNIP1Q96S55 665 aa18.46■□□□□ 0.55
CTSD-207ENST00000636571 EHD4Q9H223 541 aa18.46■□□□□ 0.55
CTSD-207ENST00000636571 PPP1R12BO60237 982 aaPredicted RBP18.45■□□□□ 0.54
CTSD-207ENST00000636571 TBC1D12O60347 775 aa18.45■□□□□ 0.54
CTSD-207ENST00000636571 GDF11O95390 407 aa18.45■□□□□ 0.54
CTSD-207ENST00000636571 DCAF15Q66K64 600 aa18.45■□□□□ 0.54
CTSD-207ENST00000636571 AMOTL1Q8IY63 956 aa18.45■□□□□ 0.54
CTSD-207ENST00000636571 ZNF341Q9BYN7 854 aa18.45■□□□□ 0.54
CTSD-207ENST00000636571 UPF2Q9HAU5 1272 aaKnown RBP18.45■□□□□ 0.54
CTSD-207ENST00000636571 ROBO3Q96MS0 1386 aa18.45■□□□□ 0.54
CTSD-207ENST00000636571 REC8O95072 547 aa18.45■□□□□ 0.54
CTSD-207ENST00000636571 CYP21A2P08686 494 aa18.45■□□□□ 0.54
CTSD-207ENST00000636571 CDK8P49336 464 aa18.45■□□□□ 0.54
CTSD-207ENST00000636571 C16orf86Q6ZW13 317 aa18.45■□□□□ 0.54
CTSD-207ENST00000636571 C2orf69Q8N8R5 385 aa18.45■□□□□ 0.54
CTSD-207ENST00000636571 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.45■□□□□ 0.545e-57■■□□□ 11.8
CTSD-207ENST00000636571 TRIM34Q9BYJ4 488 aa18.45■□□□□ 0.54
CTSD-207ENST00000636571 HERC5Q9UII4 1024 aaKnown RBP18.45■□□□□ 0.54
CTSD-207ENST00000636571 TMEM88BA6NKF7 163 aa18.44■□□□□ 0.54
CTSD-207ENST00000636571 C1QTNF8P60827 252 aa18.44■□□□□ 0.54
CTSD-207ENST00000636571 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.44■□□□□ 0.54
CTSD-207ENST00000636571 CCDC84Q86UT8 332 aaPredicted RBP18.44■□□□□ 0.54
CTSD-207ENST00000636571 ZNF112Q9UJU3 913 aa18.44■□□□□ 0.54
CTSD-207ENST00000636571 U3KPZ7 1027 aaPredicted RBP18.44■□□□□ 0.54
CTSD-207ENST00000636571 DOCK1Q14185 1865 aa18.43■□□□□ 0.54
CTSD-207ENST00000636571 CEP350Q5VT06 3117 aa18.43■□□□□ 0.54
CTSD-207ENST00000636571 ZNF213O14771 459 aa18.43■□□□□ 0.54
CTSD-207ENST00000636571 APLP1P51693 650 aa18.43■□□□□ 0.54
CTSD-207ENST00000636571 MAP3K11Q16584 847 aa18.43■□□□□ 0.54
CTSD-207ENST00000636571 TATDN1Q6P1N9 297 aa18.43■□□□□ 0.54
CTSD-207ENST00000636571 ARMC9Q7Z3E5 817 aa18.43■□□□□ 0.54
CTSD-207ENST00000636571 SAPCD2Q86UD0 394 aa18.43■□□□□ 0.54
CTSD-207ENST00000636571 USP26Q9BXU7 913 aa18.43■□□□□ 0.54
CTSD-207ENST00000636571 ANAPC4Q9UJX5 808 aa18.43■□□□□ 0.54
CTSD-207ENST00000636571 PCNTO95613 3336 aa18.43■□□□□ 0.54
CTSD-207ENST00000636571 IREB2P48200 963 aaKnown RBP18.42■□□□□ 0.54
CTSD-207ENST00000636571 HUNKP57058 714 aa18.42■□□□□ 0.54
CTSD-207ENST00000636571 COL9A3Q14050 684 aaPredicted RBP18.42■□□□□ 0.54
CTSD-207ENST00000636571 VGLL4Q14135 290 aa18.42■□□□□ 0.54
CTSD-207ENST00000636571 NECTIN1Q15223 517 aa18.42■□□□□ 0.54
CTSD-207ENST00000636571 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
CTSD-207ENST00000636571 HOOK2Q96ED9 719 aa18.42■□□□□ 0.54
CTSD-207ENST00000636571 C22orf23Q9BZE7 217 aa18.42■□□□□ 0.54
CTSD-207ENST00000636571 CTNNA3Q9UI47 895 aa18.42■□□□□ 0.54
CTSD-207ENST00000636571 ABT1Q9ULW3 272 aaKnown RBP18.42■□□□□ 0.54
CTSD-207ENST00000636571 NEDD4P46934 1319 aa18.42■□□□□ 0.54
CTSD-207ENST00000636571 SLC27A2O14975 620 aa18.42■□□□□ 0.54
CTSD-207ENST00000636571 MAP3K9P80192 1104 aa18.42■□□□□ 0.54
CTSD-207ENST00000636571 IMMTQ16891 758 aaKnown RBP18.42■□□□□ 0.54
CTSD-207ENST00000636571 LDLRAD1Q5T700 205 aa18.42■□□□□ 0.54
CTSD-207ENST00000636571 CREB3L3Q68CJ9 461 aa18.42■□□□□ 0.54
CTSD-207ENST00000636571 STOX1Q6ZVD7 989 aa18.42■□□□□ 0.54
CTSD-207ENST00000636571 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms