RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 CSRNP1Q96S65 589 aa17.15■□□□□ 0.34
LINC00339-208ENST00000634934 CDK5RAP2Q96SN8 1893 aa17.15■□□□□ 0.34
LINC00339-208ENST00000634934 NAV1Q8NEY1 1877 aa17.14■□□□□ 0.33
LINC00339-208ENST00000634934 SMIM22K7EJ46 135 aa17.14■□□□□ 0.33
LINC00339-208ENST00000634934 CYP21A2P08686 494 aa17.14■□□□□ 0.33
LINC00339-208ENST00000634934 HSPA6P17066 643 aa17.14■□□□□ 0.33
LINC00339-208ENST00000634934 HSPA4P34932 840 aa17.14■□□□□ 0.33
LINC00339-208ENST00000634934 BECN1Q14457 450 aa17.14■□□□□ 0.33
LINC00339-208ENST00000634934 PRAMEF18Q5VWM3 479 aa17.14■□□□□ 0.33
LINC00339-208ENST00000634934 CDAN1Q8IWY9 1227 aa17.14■□□□□ 0.33
LINC00339-208ENST00000634934 BAZ2AQ9UIF9 1905 aaKnown RBP17.14■□□□□ 0.33
LINC00339-208ENST00000634934 SLC3A2P08195 630 aaKnown RBP17.13■□□□□ 0.33
LINC00339-208ENST00000634934 ZKSCAN1P17029 563 aaPredicted RBP17.13■□□□□ 0.33
LINC00339-208ENST00000634934 CDC37L1Q7L3B6 337 aa17.13■□□□□ 0.33
LINC00339-208ENST00000634934 DYNLL2Q96FJ2 89 aa17.13■□□□□ 0.33
LINC00339-208ENST00000634934 TRIM34Q9BYJ4 488 aa17.13■□□□□ 0.33
LINC00339-208ENST00000634934 C22orf23Q9BZE7 217 aa17.13■□□□□ 0.33
LINC00339-208ENST00000634934 PI4KBQ9UBF8 816 aa17.13■□□□□ 0.33
LINC00339-208ENST00000634934 PPP2R3BQ9Y5P8 575 aa17.13■□□□□ 0.33
LINC00339-208ENST00000634934 TRPM7Q96QT4 1865 aa17.13■□□□□ 0.33
LINC00339-208ENST00000634934 FOCADQ5VW36 1801 aa17.13■□□□□ 0.33
LINC00339-208ENST00000634934 ATRNL1Q5VV63 1379 aa17.13■□□□□ 0.33
LINC00339-208ENST00000634934 NFKBIBQ15653 356 aa17.12■□□□□ 0.33
LINC00339-208ENST00000634934 CRACR2BQ8N4Y2 399 aaPredicted RBP17.12■□□□□ 0.33
LINC00339-208ENST00000634934 TEPSINQ96N21 525 aa17.12■□□□□ 0.33
LINC00339-208ENST00000634934 ANAPC4Q9UJX5 808 aa17.12■□□□□ 0.33
LINC00339-208ENST00000634934 TAF6LQ9Y6J9 622 aa17.12■□□□□ 0.33
LINC00339-208ENST00000634934 APLP1P51693 650 aa17.11■□□□□ 0.33
LINC00339-208ENST00000634934 NBPF12Q5TAG4 269 aaPredicted RBP17.11■□□□□ 0.33
LINC00339-208ENST00000634934 TBC1D10CQ8IV04 446 aa17.11■□□□□ 0.33
LINC00339-208ENST00000634934 RASEFQ8IZ41 740 aa17.11■□□□□ 0.33
LINC00339-208ENST00000634934 NBPF3Q9H094 633 aa17.11■□□□□ 0.33
LINC00339-208ENST00000634934 ZNF408Q9H9D4 720 aa17.11■□□□□ 0.33
LINC00339-208ENST00000634934 SERPINB13Q9UIV8 391 aa17.11■□□□□ 0.33
LINC00339-208ENST00000634934 COL2A1P02458 1487 aaPredicted RBP17.11■□□□□ 0.33
LINC00339-208ENST00000634934 MYH1P12882 1939 aa17.11■□□□□ 0.33
LINC00339-208ENST00000634934 SLURP2P0DP57 97 aa17.11■□□□□ 0.33
LINC00339-208ENST00000634934 FOXP4Q8IVH2 680 aaPredicted RBP17.11■□□□□ 0.33
LINC00339-208ENST00000634934 TBC1D32Q96NH3 1257 aa17.11■□□□□ 0.33
LINC00339-208ENST00000634934 INCENPQ9NQS7 918 aa17.11■□□□□ 0.33
LINC00339-208ENST00000634934 TOMM22Q9NS69 142 aa17.11■□□□□ 0.33
LINC00339-208ENST00000634934 SNX14Q9Y5W7 946 aa17.11■□□□□ 0.33
LINC00339-208ENST00000634934 DDX60LQ5H9U9 1706 aaKnown RBP17.1■□□□□ 0.33
LINC00339-208ENST00000634934 FAM196BA6NMK8 535 aa17.1■□□□□ 0.33
LINC00339-208ENST00000634934 PRDM1O75626 825 aa17.1■□□□□ 0.33
LINC00339-208ENST00000634934 PDE4BQ07343 736 aa17.1■□□□□ 0.33
LINC00339-208ENST00000634934 SUPT20HL1Q3ZLR7 823 aa17.1■□□□□ 0.33
LINC00339-208ENST00000634934 AKNAD1Q5T1N1 836 aa17.1■□□□□ 0.33
LINC00339-208ENST00000634934 CST9Q5W186 159 aa17.1■□□□□ 0.33
LINC00339-208ENST00000634934 MFSD6Q6ZSS7 791 aa17.1■□□□□ 0.33
LINC00339-208ENST00000634934 MIGA2Q7L4E1 593 aa17.1■□□□□ 0.33
LINC00339-208ENST00000634934 SLC44A5Q8NCS7 719 aa17.1■□□□□ 0.33
LINC00339-208ENST00000634934 EHD4Q9H223 541 aa17.1■□□□□ 0.33
LINC00339-208ENST00000634934 RNF41Q9H4P4 317 aaPredicted RBP17.1■□□□□ 0.33
LINC00339-208ENST00000634934 MKNK2Q9HBH9 465 aa17.1■□□□□ 0.33
LINC00339-208ENST00000634934 E7EWF7 191 aa17.09■□□□□ 0.33
LINC00339-208ENST00000634934 CDK8P49336 464 aa17.09■□□□□ 0.33
LINC00339-208ENST00000634934 RRP12Q5JTH9 1297 aaKnown RBP17.09■□□□□ 0.33
LINC00339-208ENST00000634934 C16orf86Q6ZW13 317 aa17.09■□□□□ 0.33
LINC00339-208ENST00000634934 STAG1Q8WVM7 1258 aa17.09■□□□□ 0.33
LINC00339-208ENST00000634934 KCNB2Q92953 911 aa17.09■□□□□ 0.33
LINC00339-208ENST00000634934 HOOK2Q96ED9 719 aa17.09■□□□□ 0.33
LINC00339-208ENST00000634934 CDCA5Q96FF9 252 aa17.09■□□□□ 0.33
LINC00339-208ENST00000634934 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.09■□□□□ 0.33
LINC00339-208ENST00000634934 TACC3Q9Y6A5 838 aa17.09■□□□□ 0.33
LINC00339-208ENST00000634934 ROBO3Q96MS0 1386 aa17.09■□□□□ 0.33
LINC00339-208ENST00000634934 CELF2O95319 508 aaKnown RBP17.08■□□□□ 0.32
LINC00339-208ENST00000634934 GABPAQ06546 454 aa17.08■□□□□ 0.32
LINC00339-208ENST00000634934 TRDNQ13061 729 aa17.08■□□□□ 0.32
LINC00339-208ENST00000634934 KRT32Q14532 448 aa17.08■□□□□ 0.32
LINC00339-208ENST00000634934 STOX1Q6ZVD7 989 aa17.08■□□□□ 0.32
LINC00339-208ENST00000634934 ZNF287Q9HBT7 754 aa17.08■□□□□ 0.32
LINC00339-208ENST00000634934 SWAP70Q9UH65 585 aa17.08■□□□□ 0.32
LINC00339-208ENST00000634934 PCNTO95613 3336 aa17.08■□□□□ 0.32
LINC00339-208ENST00000634934 RBM25P49756 843 aaKnown RBP17.07■□□□□ 0.32
LINC00339-208ENST00000634934 TSGA10IPQ3SY00 556 aa17.07■□□□□ 0.32
LINC00339-208ENST00000634934 DNAJC18Q9H819 358 aa17.07■□□□□ 0.32
LINC00339-208ENST00000634934 HERC5Q9UII4 1024 aaKnown RBP17.07■□□□□ 0.32
LINC00339-208ENST00000634934 NEDD4P46934 1319 aa17.07■□□□□ 0.32
LINC00339-208ENST00000634934 TMEM88BA6NKF7 163 aa17.06■□□□□ 0.32
LINC00339-208ENST00000634934 NF2P35240 595 aa17.06■□□□□ 0.32
LINC00339-208ENST00000634934 ANAPC15P60006 121 aa17.06■□□□□ 0.32
LINC00339-208ENST00000634934 PRKG1Q13976 671 aa17.06■□□□□ 0.32
LINC00339-208ENST00000634934 GSE1Q14687 1217 aa17.06■□□□□ 0.32
LINC00339-208ENST00000634934 ADCK5Q3MIX3 580 aa17.06■□□□□ 0.32
LINC00339-208ENST00000634934 DCAF15Q66K64 600 aa17.06■□□□□ 0.32
LINC00339-208ENST00000634934 RALYLQ86SE5 291 aaKnown RBP17.06■□□□□ 0.32
LINC00339-208ENST00000634934 METTL16Q86W50 562 aaKnown RBP17.06■□□□□ 0.32
LINC00339-208ENST00000634934 JAKMIP1Q96N16 626 aaKnown RBP17.06■□□□□ 0.32
LINC00339-208ENST00000634934 CNNM2Q9H8M5 875 aa17.06■□□□□ 0.32
LINC00339-208ENST00000634934 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.06■□□□□ 0.32
LINC00339-208ENST00000634934 LAMB1P07942 1786 aa17.06■□□□□ 0.32
LINC00339-208ENST00000634934 B4E1Z4 1266 aa17.06■□□□□ 0.32
LINC00339-208ENST00000634934 TBC1D12O60347 775 aa17.06■□□□□ 0.32
LINC00339-208ENST00000634934 RANBP6O60518 1105 aaKnown RBP17.06■□□□□ 0.32
LINC00339-208ENST00000634934 PCP11498 1178 aaKnown RBP17.06■□□□□ 0.32
LINC00339-208ENST00000634934 SHMT1P34896 483 aa17.06■□□□□ 0.32
LINC00339-208ENST00000634934 ZNF444Q8N0Y2 327 aaPredicted RBP17.06■□□□□ 0.32
LINC00339-208ENST00000634934 NCOA7Q8NI08 942 aa17.06■□□□□ 0.32
LINC00339-208ENST00000634934 NEK1Q96PY6 1258 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms