RNA–Protein interactions for RNA: ENST00000629670.1

CCDC163-208, Transcript of coiled-coil domain containing 163, humanhuman

TSL 3

Gene CCDC163, Length 919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-208ENST00000629670 TMEM57Q8N5G2 664 aa13.69□□□□□ -0.22
CCDC163-208ENST00000629670 PROCA1Q8NCQ7 364 aaPredicted RBP13.69□□□□□ -0.22
CCDC163-208ENST00000629670 ZNF280CQ8ND82 737 aa13.69□□□□□ -0.22
CCDC163-208ENST00000629670 DPF3Q92784 378 aa13.69□□□□□ -0.22
CCDC163-208ENST00000629670 HTATIP2Q9BUP3 242 aa13.69□□□□□ -0.22
CCDC163-208ENST00000629670 PI4KBQ9UBF8 816 aa13.69□□□□□ -0.22
CCDC163-208ENST00000629670 FPGT-TNNI3KV9GXZ4 949 aa13.69□□□□□ -0.22
CCDC163-208ENST00000629670 DOCK2Q92608 1830 aa13.69□□□□□ -0.22
CCDC163-208ENST00000629670 COL2A1P02458 1487 aaPredicted RBP13.68□□□□□ -0.22
CCDC163-208ENST00000629670 CENPFP49454 3210 aa13.68□□□□□ -0.22
CCDC163-208ENST00000629670 USP17L5A8MUK1 530 aa13.68□□□□□ -0.22
CCDC163-208ENST00000629670 ADCY3O60266 1144 aa13.68□□□□□ -0.22
CCDC163-208ENST00000629670 CAP2P40123 477 aa13.68□□□□□ -0.22
CCDC163-208ENST00000629670 GJA8P48165 433 aa13.68□□□□□ -0.22
CCDC163-208ENST00000629670 GCLCP48506 637 aaPredicted RBP13.68□□□□□ -0.22
CCDC163-208ENST00000629670 POLA2Q14181 598 aa13.68□□□□□ -0.22
CCDC163-208ENST00000629670 ZNF384Q8TF68 577 aa13.68□□□□□ -0.22
CCDC163-208ENST00000629670 SNRKQ9NRH2 765 aa13.68□□□□□ -0.22
CCDC163-208ENST00000629670 TNNQ9UQP3 1299 aa13.68□□□□□ -0.22
CCDC163-208ENST00000629670 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.68□□□□□ -0.22
CCDC163-208ENST00000629670 FAM196BA6NMK8 535 aa13.67□□□□□ -0.22
CCDC163-208ENST00000629670 SLURP2P0DP57 97 aa13.67□□□□□ -0.22
CCDC163-208ENST00000629670 FLT3LGP49771 235 aa13.67□□□□□ -0.22
CCDC163-208ENST00000629670 HNRNPUQ00839 825 aaKnown RBP eCLIP13.67□□□□□ -0.22
CCDC163-208ENST00000629670 FOXP4Q8IVH2 680 aaPredicted RBP13.67□□□□□ -0.22
CCDC163-208ENST00000629670 ITPRIPQ8IWB1 547 aa13.67□□□□□ -0.22
CCDC163-208ENST00000629670 CRACR2BQ8N4Y2 399 aaPredicted RBP13.67□□□□□ -0.22
CCDC163-208ENST00000629670 SSH3Q8TE77 659 aa13.67□□□□□ -0.22
CCDC163-208ENST00000629670 PXYLP1Q8TE99 480 aa13.67□□□□□ -0.22
CCDC163-208ENST00000629670 SH3RF3Q8TEJ3 882 aaPredicted RBP13.67□□□□□ -0.22
CCDC163-208ENST00000629670 AATFQ9NY61 560 aaKnown RBP eCLIP13.67□□□□□ -0.22
CCDC163-208ENST00000629670 TAOK2Q9UL54 1235 aa13.67□□□□□ -0.22
CCDC163-208ENST00000629670 ASNSP08243 561 aa13.66□□□□□ -0.22
CCDC163-208ENST00000629670 HMGCS2P54868 508 aa13.66□□□□□ -0.22
CCDC163-208ENST00000629670 PPP4CP60510 307 aa13.66□□□□□ -0.22
CCDC163-208ENST00000629670 IRF5Q13568 498 aa13.66□□□□□ -0.22
CCDC163-208ENST00000629670 FAM110CQ1W6H9 321 aa13.66□□□□□ -0.22
CCDC163-208ENST00000629670 CCDC84Q86UT8 332 aaPredicted RBP13.66□□□□□ -0.22
CCDC163-208ENST00000629670 CERS3Q8IU89 383 aa13.66□□□□□ -0.22
CCDC163-208ENST00000629670 ANKRD13CQ8N6S4 541 aa13.66□□□□□ -0.22
CCDC163-208ENST00000629670 TGFBRAP1Q8WUH2 860 aa13.66□□□□□ -0.22
CCDC163-208ENST00000629670 ZNF512BQ96KM6 892 aaPredicted RBP13.66□□□□□ -0.22
CCDC163-208ENST00000629670 DBNDD2Q9BQY9 259 aa13.66□□□□□ -0.22
CCDC163-208ENST00000629670 GINM1Q9NU53 330 aa13.66□□□□□ -0.22
CCDC163-208ENST00000629670 TMOD4Q9NZQ9 345 aa13.66□□□□□ -0.22
CCDC163-208ENST00000629670 GABRQQ9UN88 632 aa13.66□□□□□ -0.22
CCDC163-208ENST00000629670 H0YGN5 161 aa13.65□□□□□ -0.22
CCDC163-208ENST00000629670 HLA-DOAP06340 250 aa13.65□□□□□ -0.22
CCDC163-208ENST00000629670 TREML2Q5T2D2 321 aa13.65□□□□□ -0.22
CCDC163-208ENST00000629670 MAPKAPK5Q8IW41 473 aa13.65□□□□□ -0.22
CCDC163-208ENST00000629670 U2AF1L4Q8WU68 220 aaKnown RBP13.65□□□□□ -0.22
CCDC163-208ENST00000629670 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.65□□□□□ -0.22
CCDC163-208ENST00000629670 NR2E3Q9Y5X4 410 aa13.65□□□□□ -0.22
CCDC163-208ENST00000629670 ZSWIM8A7E2V4 1837 aa13.64□□□□□ -0.23
CCDC163-208ENST00000629670 DOCK1Q14185 1865 aa13.64□□□□□ -0.23
CCDC163-208ENST00000629670 FARP2O94887 1054 aaPredicted RBP13.64□□□□□ -0.23
CCDC163-208ENST00000629670 SGPL1O95470 568 aa13.64□□□□□ -0.23
CCDC163-208ENST00000629670 TFRCP02786 760 aaKnown RBP13.64□□□□□ -0.23
CCDC163-208ENST00000629670 INHAP05111 366 aa13.64□□□□□ -0.23
CCDC163-208ENST00000629670 CYP2E1P05181 493 aaPredicted RBP13.64□□□□□ -0.23
CCDC163-208ENST00000629670 IRX3P78415 501 aaPredicted RBP13.64□□□□□ -0.23
CCDC163-208ENST00000629670 SH3D19Q5HYK7 790 aa13.64□□□□□ -0.23
CCDC163-208ENST00000629670 SHISA4Q96DD7 197 aa13.64□□□□□ -0.23
CCDC163-208ENST00000629670 WDR18Q9BV38 432 aa13.64□□□□□ -0.23
CCDC163-208ENST00000629670 UNC93B1Q9H1C4 597 aa13.64□□□□□ -0.23
CCDC163-208ENST00000629670 C1orf115Q9H7X2 142 aa13.64□□□□□ -0.23
CCDC163-208ENST00000629670 NOP58Q9Y2X3 529 aaKnown RBP13.64□□□□□ -0.23
CCDC163-208ENST00000629670 MKI67P46013 3256 aaKnown RBP13.64□□□□□ -0.23
CCDC163-208ENST00000629670 C19orf81C9J6K1 198 aa13.63□□□□□ -0.23
CCDC163-208ENST00000629670 ELNP15502 786 aa13.63□□□□□ -0.23
CCDC163-208ENST00000629670 CYP7A1P22680 504 aa13.63□□□□□ -0.23
CCDC163-208ENST00000629670 ZAP70P43403 619 aa13.63□□□□□ -0.23
CCDC163-208ENST00000629670 BACE1P56817 501 aa13.63□□□□□ -0.23
CCDC163-208ENST00000629670 TMED8Q6PL24 325 aaPredicted RBP13.63□□□□□ -0.23
CCDC163-208ENST00000629670 ERC1Q8IUD2 1116 aa13.63□□□□□ -0.23
CCDC163-208ENST00000629670 ASCC2Q9H1I8 757 aaPredicted RBP13.63□□□□□ -0.23
CCDC163-208ENST00000629670 COLQQ9Y215 455 aaPredicted RBP13.63□□□□□ -0.23
CCDC163-208ENST00000629670 FLT1P17948 1338 aa13.63□□□□□ -0.23
CCDC163-208ENST00000629670 USP17L10C9JJH3 530 aa13.62□□□□□ -0.23
CCDC163-208ENST00000629670 ZBTB7BO15156 539 aaPredicted RBP13.62□□□□□ -0.23
CCDC163-208ENST00000629670 IDH1O75874 414 aaKnown RBP13.62□□□□□ -0.23
CCDC163-208ENST00000629670 MS4A1P11836 297 aa13.62□□□□□ -0.23
CCDC163-208ENST00000629670 USP5P45974 858 aa13.62□□□□□ -0.23
CCDC163-208ENST00000629670 MAP3K12Q12852 859 aa13.62□□□□□ -0.23
CCDC163-208ENST00000629670 HSP90AB4PQ58FF6 505 aa13.62□□□□□ -0.23
CCDC163-208ENST00000629670 CCAR1Q8IX12 1150 aaKnown RBP13.62□□□□□ -0.23
CCDC163-208ENST00000629670 DEFB118Q96PH6 123 aa13.62□□□□□ -0.23
CCDC163-208ENST00000629670 CCDC8Q9H0W5 538 aaPredicted RBP13.62□□□□□ -0.23
CCDC163-208ENST00000629670 PALD1Q9ULE6 856 aa13.62□□□□□ -0.23
CCDC163-208ENST00000629670 MTMR2Q13614 643 aa13.61□□□□□ -0.23
CCDC163-208ENST00000629670 RRP1BQ14684 758 aaKnown RBP13.61□□□□□ -0.23
CCDC163-208ENST00000629670 GTF3C2Q8WUA4 911 aaPredicted RBP13.61□□□□□ -0.23
CCDC163-208ENST00000629670 PIH1D3Q9NQM4 214 aaKnown RBP13.61□□□□□ -0.23
CCDC163-208ENST00000629670 SAP30BPQ9UHR5 308 aaKnown RBP13.61□□□□□ -0.23
CCDC163-208ENST00000629670 DBNLQ9UJU6 430 aaKnown RBP13.61□□□□□ -0.23
CCDC163-208ENST00000629670 BRCA2P51587 3418 aa13.61□□□□□ -0.23
CCDC163-208ENST00000629670 HMGCRP04035 888 aa13.6□□□□□ -0.23
CCDC163-208ENST00000629670 HOXA7P31268 230 aaPredicted RBP13.6□□□□□ -0.23
CCDC163-208ENST00000629670 CHRDL2Q6WN34 429 aa13.6□□□□□ -0.23
CCDC163-208ENST00000629670 UBE2Q1Q7Z7E8 422 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms