RNA–Protein interactions for RNA: ENST00000629089.1

SPTAN1-217, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-217ENST00000629089 PDE4BQ07343 736 aa20.94■□□□□ 0.94
SPTAN1-217ENST00000629089 TSGA10IPQ3SY00 556 aa20.94■□□□□ 0.94
SPTAN1-217ENST00000629089 STAG1Q8WVM7 1258 aa20.94■□□□□ 0.94
SPTAN1-217ENST00000629089 DYNLL2Q96FJ2 89 aa20.94■□□□□ 0.94
SPTAN1-217ENST00000629089 NBPF3Q9H094 633 aa20.94■□□□□ 0.94
SPTAN1-217ENST00000629089 GPBP1L1Q9HC44 474 aaPredicted RBP20.94■□□□□ 0.94
SPTAN1-217ENST00000629089 TOMM22Q9NS69 142 aa20.94■□□□□ 0.94
SPTAN1-217ENST00000629089 PGAP2Q9UHJ9 254 aa20.94■□□□□ 0.94
SPTAN1-217ENST00000629089 SERPINB13Q9UIV8 391 aa20.94■□□□□ 0.94
SPTAN1-217ENST00000629089 ROBO3Q96MS0 1386 aa20.93■□□□□ 0.94
SPTAN1-217ENST00000629089 POLR2AP24928 1970 aaKnown RBP20.93■□□□□ 0.94
SPTAN1-217ENST00000629089 POTEIP0CG38 1075 aa20.93■□□□□ 0.94
SPTAN1-217ENST00000629089 POTEJP0CG39 1038 aa20.93■□□□□ 0.94
SPTAN1-217ENST00000629089 TRDNQ13061 729 aa20.93■□□□□ 0.94
SPTAN1-217ENST00000629089 KRT26Q7Z3Y9 468 aa20.93■□□□□ 0.94
SPTAN1-217ENST00000629089 EHD4Q9H223 541 aa20.93■□□□□ 0.94
SPTAN1-217ENST00000629089 ADCK5Q3MIX3 580 aa20.92■□□□□ 0.94
SPTAN1-217ENST00000629089 RRP12Q5JTH9 1297 aaKnown RBP20.92■□□□□ 0.94
SPTAN1-217ENST00000629089 STOX1Q6ZVD7 989 aa20.92■□□□□ 0.94
SPTAN1-217ENST00000629089 FOXP4Q8IVH2 680 aaPredicted RBP20.92■□□□□ 0.94
SPTAN1-217ENST00000629089 CDAN1Q8IWY9 1227 aa20.92■□□□□ 0.94
SPTAN1-217ENST00000629089 MKNK2Q9HBH9 465 aa20.92■□□□□ 0.94
SPTAN1-217ENST00000629089 ZNF287Q9HBT7 754 aa20.92■□□□□ 0.94
SPTAN1-217ENST00000629089 INCENPQ9NQS7 918 aa20.92■□□□□ 0.94
SPTAN1-217ENST00000629089 ADM5C9JUS6 153 aa20.91■□□□□ 0.94
SPTAN1-217ENST00000629089 PRAMEF18Q5VWM3 479 aa20.91■□□□□ 0.94
SPTAN1-217ENST00000629089 C16orf86Q6ZW13 317 aa20.91■□□□□ 0.94
SPTAN1-217ENST00000629089 RALYLQ86SE5 291 aaKnown RBP20.91■□□□□ 0.94
SPTAN1-217ENST00000629089 LDHDQ86WU2 507 aa20.91■□□□□ 0.94
SPTAN1-217ENST00000629089 NCOA7Q8NI08 942 aa20.91■□□□□ 0.94
SPTAN1-217ENST00000629089 JAKMIP1Q96N16 626 aaKnown RBP20.91■□□□□ 0.94
SPTAN1-217ENST00000629089 TEPSINQ96N21 525 aa20.91■□□□□ 0.94
SPTAN1-217ENST00000629089 CNNM2Q9H8M5 875 aa20.91■□□□□ 0.94
SPTAN1-217ENST00000629089 SWAP70Q9UH65 585 aa20.91■□□□□ 0.94
SPTAN1-217ENST00000629089 PRDM1O75626 825 aa20.9■□□□□ 0.94
SPTAN1-217ENST00000629089 PCP11498 1178 aaKnown RBP20.9■□□□□ 0.94
SPTAN1-217ENST00000629089 PSMA5P28066 241 aa20.9■□□□□ 0.94
SPTAN1-217ENST00000629089 CDK8P49336 464 aa20.9■□□□□ 0.94
SPTAN1-217ENST00000629089 GABPAQ06546 454 aa20.9■□□□□ 0.94
SPTAN1-217ENST00000629089 CDC37L1Q7L3B6 337 aa20.9■□□□□ 0.94
SPTAN1-217ENST00000629089 USP48Q86UV5 1035 aa20.9■□□□□ 0.94
SPTAN1-217ENST00000629089 SLC44A5Q8NCS7 719 aa20.9■□□□□ 0.94
SPTAN1-217ENST00000629089 NEK1Q96PY6 1258 aa20.9■□□□□ 0.94
SPTAN1-217ENST00000629089 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.9■□□□□ 0.94
SPTAN1-217ENST00000629089 NEDD4P46934 1319 aa20.9■□□□□ 0.94
SPTAN1-217ENST00000629089 SIPA1L1O43166 1804 aa20.9■□□□□ 0.94
SPTAN1-217ENST00000629089 NBPF12Q5TAG4 269 aaPredicted RBP20.89■□□□□ 0.94
SPTAN1-217ENST00000629089 MAP1SQ66K74 1059 aaPredicted RBP20.89■□□□□ 0.94
SPTAN1-217ENST00000629089 HOOK2Q96ED9 719 aa20.89■□□□□ 0.94
SPTAN1-217ENST00000629089 KRT23Q9C075 422 aa20.89■□□□□ 0.94
SPTAN1-217ENST00000629089 HERC5Q9UII4 1024 aaKnown RBP20.89■□□□□ 0.94
SPTAN1-217ENST00000629089 TACC3Q9Y6A5 838 aa20.89■□□□□ 0.94
SPTAN1-217ENST00000629089 FAM196BA6NMK8 535 aa20.88■□□□□ 0.93
SPTAN1-217ENST00000629089 SLURP2P0DP57 97 aa20.88■□□□□ 0.93
SPTAN1-217ENST00000629089 CASTP20810 708 aaKnown RBP20.88■□□□□ 0.93
SPTAN1-217ENST00000629089 YY1P25490 414 aa20.88■□□□□ 0.93
SPTAN1-217ENST00000629089 MIGA2Q7L4E1 593 aa20.88■□□□□ 0.93
SPTAN1-217ENST00000629089 ZNF444Q8N0Y2 327 aaPredicted RBP20.88■□□□□ 0.93
SPTAN1-217ENST00000629089 GLIS2Q9BZE0 524 aaPredicted RBP20.88■□□□□ 0.93
SPTAN1-217ENST00000629089 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.88■□□□□ 0.93
SPTAN1-217ENST00000629089 B4E1Z4 1266 aa20.88■□□□□ 0.93
SPTAN1-217ENST00000629089 FGRP09769 529 aa20.88■□□□□ 0.93
SPTAN1-217ENST00000629089 SUPT20HL1Q3ZLR7 823 aa20.88■□□□□ 0.93
SPTAN1-217ENST00000629089 ESR2Q92731 530 aa20.88■□□□□ 0.93
SPTAN1-217ENST00000629089 IL17RAQ96F46 866 aa20.88■□□□□ 0.93
SPTAN1-217ENST00000629089 KIF2CQ99661 725 aa20.88■□□□□ 0.93
SPTAN1-217ENST00000629089 TAOK2Q9UL54 1235 aa20.88■□□□□ 0.93
SPTAN1-217ENST00000629089 ORC4O43929 436 aa20.87■□□□□ 0.93
SPTAN1-217ENST00000629089 RANBP6O60518 1105 aaKnown RBP20.87■□□□□ 0.93
SPTAN1-217ENST00000629089 HMGB1P09429 215 aaKnown RBP20.87■□□□□ 0.93
SPTAN1-217ENST00000629089 DCAF15Q66K64 600 aa20.87■□□□□ 0.93
SPTAN1-217ENST00000629089 BLOC1S2Q6QNY1 142 aa20.87■□□□□ 0.93
SPTAN1-217ENST00000629089 METTL16Q86W50 562 aaKnown RBP20.87■□□□□ 0.93
SPTAN1-217ENST00000629089 TM6SF1Q9BZW5 370 aa20.87■□□□□ 0.93
SPTAN1-217ENST00000629089 DNAJC18Q9H819 358 aa20.87■□□□□ 0.93
SPTAN1-217ENST00000629089 MYH8P13535 1937 aa20.87■□□□□ 0.93
SPTAN1-217ENST00000629089 TBC1D12O60347 775 aa20.86■□□□□ 0.93
SPTAN1-217ENST00000629089 KDM4AO75164 1064 aa20.86■□□□□ 0.93
SPTAN1-217ENST00000629089 SHMT1P34896 483 aa20.86■□□□□ 0.93
SPTAN1-217ENST00000629089 DLK2Q6UY11 383 aa20.86■□□□□ 0.93
SPTAN1-217ENST00000629089 UPF3BQ9BZI7 483 aaKnown RBP20.86■□□□□ 0.93
SPTAN1-217ENST00000629089 TSPY2A6NKD2 308 aa20.85■□□□□ 0.93
SPTAN1-217ENST00000629089 NF2P35240 595 aa20.85■□□□□ 0.93
SPTAN1-217ENST00000629089 CDCA5Q96FF9 252 aa20.85■□□□□ 0.93
SPTAN1-217ENST00000629089 ZSWIM6Q9HCJ5 1215 aa20.85■□□□□ 0.93
SPTAN1-217ENST00000629089 CYP46A1Q9Y6A2 500 aa20.85■□□□□ 0.93
SPTAN1-217ENST00000629089 CPA1P15085 419 aa20.84■□□□□ 0.93
SPTAN1-217ENST00000629089 RASA1P20936 1047 aa20.84■□□□□ 0.93
SPTAN1-217ENST00000629089 MCM5P33992 734 aa20.84■□□□□ 0.93
SPTAN1-217ENST00000629089 RABEP1Q15276 862 aa20.84■□□□□ 0.93
SPTAN1-217ENST00000629089 CERKLQ49MI3 558 aaPredicted RBP20.84■□□□□ 0.93
SPTAN1-217ENST00000629089 FAM47AQ5JRC9 791 aa20.84■□□□□ 0.93
SPTAN1-217ENST00000629089 TATDN1Q6P1N9 297 aa20.84■□□□□ 0.93
SPTAN1-217ENST00000629089 RUFY3Q7L099 469 aa20.84■□□□□ 0.93
SPTAN1-217ENST00000629089 MB21D2Q8IYB1 491 aaPredicted RBP20.84■□□□□ 0.93
SPTAN1-217ENST00000629089 TSPY3P0CV98 308 aa20.83■□□□□ 0.93
SPTAN1-217ENST00000629089 TSPY8P0CW00 308 aa20.83■□□□□ 0.93
SPTAN1-217ENST00000629089 NT5C2P49902 561 aa20.83■□□□□ 0.93
SPTAN1-217ENST00000629089 TFAP4Q01664 338 aa20.83■□□□□ 0.93
SPTAN1-217ENST00000629089 MAP3K10Q02779 954 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms