RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 ATF7IPQ6VMQ6 1270 aa20.33■□□□□ 0.85
TRIM29-221ENST00000627238 NEUROD6Q96NK8 337 aa20.33■□□□□ 0.85
TRIM29-221ENST00000627238 GPR108Q9NPR9 543 aa20.33■□□□□ 0.85
TRIM29-221ENST00000627238 BIN2Q9UBW5 565 aaPredicted RBP20.33■□□□□ 0.85
TRIM29-221ENST00000627238 HERC5Q9UII4 1024 aaKnown RBP20.33■□□□□ 0.85
TRIM29-221ENST00000627238 SIPA1L1O43166 1804 aa20.32■□□□□ 0.84
TRIM29-221ENST00000627238 PNMA6EA0A0J9YXQ4 647 aa20.32■□□□□ 0.84
TRIM29-221ENST00000627238 TNPO2O14787 897 aaKnown RBP20.32■□□□□ 0.84
TRIM29-221ENST00000627238 UQCRFS1P1P0C7P4 283 aa20.32■□□□□ 0.84
TRIM29-221ENST00000627238 CAP2P40123 477 aa20.32■□□□□ 0.84
TRIM29-221ENST00000627238 MCAMP43121 646 aa20.32■□□□□ 0.84
TRIM29-221ENST00000627238 SH3D19Q5HYK7 790 aa20.32■□□□□ 0.84
TRIM29-221ENST00000627238 ZNF280CQ8ND82 737 aa20.32■□□□□ 0.84
TRIM29-221ENST00000627238 UNC93B1Q9H1C4 597 aa20.32■□□□□ 0.84
TRIM29-221ENST00000627238 PRO3102Q9H379 93 aa20.32■□□□□ 0.84
TRIM29-221ENST00000627238 PAK6Q9NQU5 681 aaPredicted RBP20.32■□□□□ 0.84
TRIM29-221ENST00000627238 DOCK3Q8IZD9 2030 aa20.32■□□□□ 0.84
TRIM29-221ENST00000627238 FOCADQ5VW36 1801 aa20.32■□□□□ 0.84
TRIM29-221ENST00000627238 GCLCP48506 637 aaPredicted RBP20.31■□□□□ 0.84
TRIM29-221ENST00000627238 TREML2Q5T2D2 321 aa20.31■□□□□ 0.84
TRIM29-221ENST00000627238 TBC1D9Q6ZT07 1266 aa20.31■□□□□ 0.84
TRIM29-221ENST00000627238 DPF3Q92784 378 aa20.31■□□□□ 0.84
TRIM29-221ENST00000627238 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.31■□□□□ 0.84
TRIM29-221ENST00000627238 INHAP05111 366 aa20.3■□□□□ 0.84
TRIM29-221ENST00000627238 SPP2Q13103 211 aa20.3■□□□□ 0.84
TRIM29-221ENST00000627238 G3BP1Q13283 466 aaKnown RBP eCLIP20.3■□□□□ 0.84
TRIM29-221ENST00000627238 POLA2Q14181 598 aa20.3■□□□□ 0.84
TRIM29-221ENST00000627238 GORABQ5T7V8 394 aa20.3■□□□□ 0.84
TRIM29-221ENST00000627238 CCDC84Q86UT8 332 aaPredicted RBP20.3■□□□□ 0.84
TRIM29-221ENST00000627238 METTL16Q86W50 562 aaKnown RBP20.3■□□□□ 0.84
TRIM29-221ENST00000627238 ANKRD13CQ8N6S4 541 aa20.3■□□□□ 0.84
TRIM29-221ENST00000627238 DHX36Q9H2U1 1008 aaKnown RBP20.3■□□□□ 0.84
TRIM29-221ENST00000627238 RAI14Q9P0K7 980 aa20.3■□□□□ 0.84
TRIM29-221ENST00000627238 LAMA3Q16787 3333 aa20.29■□□□□ 0.84
TRIM29-221ENST00000627238 CDK5RAP2Q96SN8 1893 aa20.29■□□□□ 0.84
TRIM29-221ENST00000627238 FAM196BA6NMK8 535 aa20.29■□□□□ 0.84
TRIM29-221ENST00000627238 FARP2O94887 1054 aaPredicted RBP20.29■□□□□ 0.84
TRIM29-221ENST00000627238 PPP4CP60510 307 aa20.29■□□□□ 0.84
TRIM29-221ENST00000627238 PABPC4Q13310 644 aaKnown RBP eCLIP20.29■□□□□ 0.84
TRIM29-221ENST00000627238 CHRDL2Q6WN34 429 aa20.29■□□□□ 0.84
TRIM29-221ENST00000627238 TEX11Q8IYF3 940 aa20.29■□□□□ 0.84
TRIM29-221ENST00000627238 COA7Q96BR5 231 aa20.29■□□□□ 0.84
TRIM29-221ENST00000627238 ZNF512BQ96KM6 892 aaPredicted RBP20.29■□□□□ 0.84
TRIM29-221ENST00000627238 WDR18Q9BV38 432 aa20.29■□□□□ 0.84
TRIM29-221ENST00000627238 CRISPLD2Q9H0B8 497 aa20.29■□□□□ 0.84
TRIM29-221ENST00000627238 USP17L5A8MUK1 530 aa20.28■□□□□ 0.84
TRIM29-221ENST00000627238 ELNP15502 786 aa20.28■□□□□ 0.84
TRIM29-221ENST00000627238 RRP1BQ14684 758 aaKnown RBP20.28■□□□□ 0.84
TRIM29-221ENST00000627238 PI4KBQ9UBF8 816 aa20.28■□□□□ 0.84
TRIM29-221ENST00000627238 PLCG2P16885 1265 aa20.27■□□□□ 0.84
TRIM29-221ENST00000627238 SH3RF3Q8TEJ3 882 aaPredicted RBP20.27■□□□□ 0.84
TRIM29-221ENST00000627238 AS3MTQ9HBK9 375 aa20.27■□□□□ 0.84
TRIM29-221ENST00000627238 GINM1Q9NU53 330 aa20.27■□□□□ 0.84
TRIM29-221ENST00000627238 LRP2BPQ9P2M1 347 aa20.27■□□□□ 0.84
TRIM29-221ENST00000627238 RBM27Q9P2N5 1060 aaKnown RBP20.27■□□□□ 0.84
TRIM29-221ENST00000627238 MORF4L1Q9UBU8 362 aa20.27■□□□□ 0.84
TRIM29-221ENST00000627238 NR2E3Q9Y5X4 410 aa20.27■□□□□ 0.84
TRIM29-221ENST00000627238 PLXNB2O15031 1838 aa20.26■□□□□ 0.83
TRIM29-221ENST00000627238 ZBTB7BO15156 539 aaPredicted RBP20.26■□□□□ 0.83
TRIM29-221ENST00000627238 BCAR3O75815 825 aa20.26■□□□□ 0.83
TRIM29-221ENST00000627238 BAG3O95817 575 aa20.26■□□□□ 0.83
TRIM29-221ENST00000627238 HMGCS2P54868 508 aa20.26■□□□□ 0.83
TRIM29-221ENST00000627238 TNNI3KQ59H18 835 aa20.26■□□□□ 0.83
TRIM29-221ENST00000627238 SSH3Q8TE77 659 aa20.26■□□□□ 0.83
TRIM29-221ENST00000627238 ASCC2Q9H1I8 757 aaPredicted RBP20.26■□□□□ 0.83
TRIM29-221ENST00000627238 GJD2Q9UKL4 321 aa20.26■□□□□ 0.83
TRIM29-221ENST00000627238 TNNQ9UQP3 1299 aa20.26■□□□□ 0.83
TRIM29-221ENST00000627238 FPGT-TNNI3KV9GXZ4 949 aa20.26■□□□□ 0.83
TRIM29-221ENST00000627238 A0A1W2PPC1 479 aa20.25■□□□□ 0.83
TRIM29-221ENST00000627238 ASNSP08243 561 aa20.25■□□□□ 0.83
TRIM29-221ENST00000627238 HOXA7P31268 230 aaPredicted RBP20.25■□□□□ 0.83
TRIM29-221ENST00000627238 NAA16Q6N069 864 aaPredicted RBP20.25■□□□□ 0.83
TRIM29-221ENST00000627238 DEFB118Q96PH6 123 aa20.25■□□□□ 0.83
TRIM29-221ENST00000627238 NOL10Q9BSC4 688 aaKnown RBP20.25■□□□□ 0.83
TRIM29-221ENST00000627238 BACE1P56817 501 aa20.24■□□□□ 0.83
TRIM29-221ENST00000627238 CCDC158Q5M9N0 1113 aa20.24■□□□□ 0.83
TRIM29-221ENST00000627238 FOXP4Q8IVH2 680 aaPredicted RBP20.24■□□□□ 0.83
TRIM29-221ENST00000627238 ANKLE1Q8NAG6 615 aa20.24■□□□□ 0.83
TRIM29-221ENST00000627238 DNAJC18Q9H819 358 aa20.24■□□□□ 0.83
TRIM29-221ENST00000627238 HMGCRP04035 888 aa20.23■□□□□ 0.83
TRIM29-221ENST00000627238 CYP2E1P05181 493 aaPredicted RBP20.23■□□□□ 0.83
TRIM29-221ENST00000627238 ATP8B2P98198 1209 aa20.23■□□□□ 0.83
TRIM29-221ENST00000627238 ZKSCAN2Q63HK3 967 aa20.23■□□□□ 0.83
TRIM29-221ENST00000627238 TMEM57Q8N5G2 664 aa20.23■□□□□ 0.83
TRIM29-221ENST00000627238 FRAT1Q92837 279 aaPredicted RBP20.23■□□□□ 0.83
TRIM29-221ENST00000627238 DBNDD2Q9BQY9 259 aa20.23■□□□□ 0.83
TRIM29-221ENST00000627238 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.23■□□□□ 0.83
TRIM29-221ENST00000627238 AATFQ9NY61 560 aaKnown RBP eCLIP20.23■□□□□ 0.83
TRIM29-221ENST00000627238 NOP58Q9Y2X3 529 aaKnown RBP20.23■□□□□ 0.83
TRIM29-221ENST00000627238 MYO5AQ9Y4I1 1855 aaKnown RBP20.23■□□□□ 0.83
TRIM29-221ENST00000627238 ALPK3Q96L96 1907 aa20.23■□□□□ 0.83
TRIM29-221ENST00000627238 FLT1P17948 1338 aa20.23■□□□□ 0.83
TRIM29-221ENST00000627238 C19orf81C9J6K1 198 aa20.22■□□□□ 0.83
TRIM29-221ENST00000627238 TFRCP02786 760 aaKnown RBP20.22■□□□□ 0.83
TRIM29-221ENST00000627238 TTC39AQ5SRH9 613 aa20.22■□□□□ 0.83
TRIM29-221ENST00000627238 ADGRA1Q86SQ6 560 aa20.22■□□□□ 0.83
TRIM29-221ENST00000627238 CLUAP1Q96AJ1 413 aa20.22■□□□□ 0.83
TRIM29-221ENST00000627238 TMED8Q6PL24 325 aaPredicted RBP20.21■□□□□ 0.83
TRIM29-221ENST00000627238 CERS3Q8IU89 383 aa20.21■□□□□ 0.83
TRIM29-221ENST00000627238 TGFBRAP1Q8WUH2 860 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms