RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 NEDD4P46934 1319 aa19.74■□□□□ 0.75
CCNA1-203ENST00000625767 EPB41L2O43491 1005 aaKnown RBP19.74■□□□□ 0.75
CCNA1-203ENST00000625767 PRDM1O75626 825 aa19.74■□□□□ 0.75
CCNA1-203ENST00000625767 TNNI2P48788 182 aa19.74■□□□□ 0.75
CCNA1-203ENST00000625767 KRT26Q7Z3Y9 468 aa19.74■□□□□ 0.75
CCNA1-203ENST00000625767 USP48Q86UV5 1035 aa19.74■□□□□ 0.75
CCNA1-203ENST00000625767 ZC3H15Q8WU90 426 aaKnown RBP19.74■□□□□ 0.75
CCNA1-203ENST00000625767 KCNB2Q92953 911 aa19.74■□□□□ 0.75
CCNA1-203ENST00000625767 KIF2CQ99661 725 aa19.74■□□□□ 0.75
CCNA1-203ENST00000625767 GPBP1L1Q9HC44 474 aaPredicted RBP19.74■□□□□ 0.75
CCNA1-203ENST00000625767 ANAPC4Q9UJX5 808 aa19.74■□□□□ 0.75
CCNA1-203ENST00000625767 SSC5DA1L4H1 1573 aa19.74■□□□□ 0.75
CCNA1-203ENST00000625767 E7EWF7 191 aa19.73■□□□□ 0.75
CCNA1-203ENST00000625767 TNFAIP1Q13829 316 aa19.73■□□□□ 0.75
CCNA1-203ENST00000625767 UPF2Q9HAU5 1272 aaKnown RBP19.73■□□□□ 0.75
CCNA1-203ENST00000625767 ROBO3Q96MS0 1386 aa19.73■□□□□ 0.75
CCNA1-203ENST00000625767 CPA1P15085 419 aa19.72■□□□□ 0.75
CCNA1-203ENST00000625767 RBM25P49756 843 aaKnown RBP19.72■□□□□ 0.75
CCNA1-203ENST00000625767 GABPAQ06546 454 aa19.72■□□□□ 0.75
CCNA1-203ENST00000625767 MIGA2Q7L4E1 593 aa19.72■□□□□ 0.75
CCNA1-203ENST00000625767 SULF1Q8IWU6 871 aa19.72■□□□□ 0.75
CCNA1-203ENST00000625767 DHX36Q9H2U1 1008 aaKnown RBP19.72■□□□□ 0.75
CCNA1-203ENST00000625767 TRAF5O00463 557 aa19.71■□□□□ 0.75
CCNA1-203ENST00000625767 YY1P25490 414 aa19.71■□□□□ 0.75
CCNA1-203ENST00000625767 SHROOM1Q2M3G4 852 aaPredicted RBP19.71■□□□□ 0.75
CCNA1-203ENST00000625767 TTC6Q86TZ1 520 aa19.71■□□□□ 0.75
CCNA1-203ENST00000625767 PI4KBQ9UBF8 816 aa19.71■□□□□ 0.75
CCNA1-203ENST00000625767 EIF5BO60841 1220 aaKnown RBP19.71■□□□□ 0.75
CCNA1-203ENST00000625767 HLA-DOAP06340 250 aa19.71■□□□□ 0.75
CCNA1-203ENST00000625767 MCCP23508 829 aa19.71■□□□□ 0.75
CCNA1-203ENST00000625767 AKNAD1Q5T1N1 836 aa19.71■□□□□ 0.75
CCNA1-203ENST00000625767 C16orf86Q6ZW13 317 aa19.71■□□□□ 0.75
CCNA1-203ENST00000625767 AMOTL1Q8IY63 956 aa19.71■□□□□ 0.75
CCNA1-203ENST00000625767 SERPINB13Q9UIV8 391 aa19.71■□□□□ 0.75
CCNA1-203ENST00000625767 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.71■□□□□ 0.75
CCNA1-203ENST00000625767 KIF3CO14782 793 aa19.7■□□□□ 0.74
CCNA1-203ENST00000625767 CDK8P49336 464 aa19.7■□□□□ 0.74
CCNA1-203ENST00000625767 RRP1BQ14684 758 aaKnown RBP19.7■□□□□ 0.74
CCNA1-203ENST00000625767 RRP12Q5JTH9 1297 aaKnown RBP19.7■□□□□ 0.74
CCNA1-203ENST00000625767 RNF20Q5VTR2 975 aa19.7■□□□□ 0.74
CCNA1-203ENST00000625767 LDHDQ86WU2 507 aa19.7■□□□□ 0.74
CCNA1-203ENST00000625767 STAG1Q8WVM7 1258 aa19.7■□□□□ 0.74
CCNA1-203ENST00000625767 B4E1Z4 1266 aa19.69■□□□□ 0.74
CCNA1-203ENST00000625767 SHMT1P34896 483 aa19.69■□□□□ 0.74
CCNA1-203ENST00000625767 TOMM22Q9NS69 142 aa19.69■□□□□ 0.74
CCNA1-203ENST00000625767 ATAD5Q96QE3 1844 aa19.69■□□□□ 0.74
CCNA1-203ENST00000625767 ZKSCAN1P17029 563 aaPredicted RBP19.68■□□□□ 0.74
CCNA1-203ENST00000625767 PRKG1Q13976 671 aa19.68■□□□□ 0.74
CCNA1-203ENST00000625767 TSGA10IPQ3SY00 556 aa19.68■□□□□ 0.74
CCNA1-203ENST00000625767 MFSD6Q6ZSS7 791 aa19.68■□□□□ 0.74
CCNA1-203ENST00000625767 CHST3Q7LGC8 479 aa19.68■□□□□ 0.74
CCNA1-203ENST00000625767 METTL16Q86W50 562 aaKnown RBP19.68■□□□□ 0.74
CCNA1-203ENST00000625767 CRACR2BQ8N4Y2 399 aaPredicted RBP19.68■□□□□ 0.74
CCNA1-203ENST00000625767 CDCA5Q96FF9 252 aa19.68■□□□□ 0.74
CCNA1-203ENST00000625767 TCEANC2Q96MN5 208 aa19.68■□□□□ 0.74
CCNA1-203ENST00000625767 JAKMIP1Q96N16 626 aaKnown RBP19.68■□□□□ 0.74
CCNA1-203ENST00000625767 UPF3BQ9BZI7 483 aaKnown RBP19.68■□□□□ 0.74
CCNA1-203ENST00000625767 EHD4Q9H223 541 aa19.68■□□□□ 0.74
CCNA1-203ENST00000625767 ZNF784Q8NCA9 323 aaPredicted RBP19.68■□□□□ 0.74
CCNA1-203ENST00000625767 OTOFQ9HC10 1997 aa19.68■□□□□ 0.74
CCNA1-203ENST00000625767 FGRP09769 529 aa19.67■□□□□ 0.74
CCNA1-203ENST00000625767 RASA1P20936 1047 aa19.67■□□□□ 0.74
CCNA1-203ENST00000625767 JAG1P78504 1218 aa19.67■□□□□ 0.74
CCNA1-203ENST00000625767 FAM47AQ5JRC9 791 aa19.67■□□□□ 0.74
CCNA1-203ENST00000625767 CYB5R4Q7L1T6 521 aa19.67■□□□□ 0.74
CCNA1-203ENST00000625767 CDC37L1Q7L3B6 337 aa19.67■□□□□ 0.74
CCNA1-203ENST00000625767 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.67■□□□□ 0.74
CCNA1-203ENST00000625767 PPP2R3BQ9Y5P8 575 aa19.67■□□□□ 0.74
CCNA1-203ENST00000625767 PAPPA2Q9BXP8 1791 aa19.66■□□□□ 0.74
CCNA1-203ENST00000625767 CASTP20810 708 aaKnown RBP19.66■□□□□ 0.74
CCNA1-203ENST00000625767 ANAPC15P60006 121 aa19.66■□□□□ 0.74
CCNA1-203ENST00000625767 FOXP4Q8IVH2 680 aaPredicted RBP19.66■□□□□ 0.74
CCNA1-203ENST00000625767 MKNK2Q9HBH9 465 aa19.66■□□□□ 0.74
CCNA1-203ENST00000625767 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.66■□□□□ 0.74
CCNA1-203ENST00000625767 GREB1LQ9C091 1923 aaPredicted RBP19.66■□□□□ 0.74
CCNA1-203ENST00000625767 KDM4AO75164 1064 aa19.65■□□□□ 0.74
CCNA1-203ENST00000625767 ANTXR2P58335 489 aa19.65■□□□□ 0.74
CCNA1-203ENST00000625767 PDE4BQ07343 736 aa19.65■□□□□ 0.74
CCNA1-203ENST00000625767 MB21D2Q8IYB1 491 aaPredicted RBP19.65■□□□□ 0.74
CCNA1-203ENST00000625767 IL17RAQ96F46 866 aa19.65■□□□□ 0.74
CCNA1-203ENST00000625767 NEK1Q96PY6 1258 aa19.65■□□□□ 0.74
CCNA1-203ENST00000625767 LRRC2Q9BYS8 371 aa19.65■□□□□ 0.74
CCNA1-203ENST00000625767 ORC4O43929 436 aa19.65■□□□□ 0.74
CCNA1-203ENST00000625767 RANBP6O60518 1105 aaKnown RBP19.65■□□□□ 0.74
CCNA1-203ENST00000625767 GDF11O95390 407 aa19.65■□□□□ 0.74
CCNA1-203ENST00000625767 SLC3A2P08195 630 aaKnown RBP19.65■□□□□ 0.74
CCNA1-203ENST00000625767 AKR1B1P15121 316 aa19.65■□□□□ 0.74
CCNA1-203ENST00000625767 TATDN1Q6P1N9 297 aa19.65■□□□□ 0.74
CCNA1-203ENST00000625767 MOB2Q70IA6 237 aa19.65■□□□□ 0.74
CCNA1-203ENST00000625767 ZKSCAN3Q9BRR0 538 aa19.65■□□□□ 0.74
CCNA1-203ENST00000625767 RNF41Q9H4P4 317 aaPredicted RBP19.65■□□□□ 0.74
CCNA1-203ENST00000625767 ZSWIM5Q9P217 1185 aa19.65■□□□□ 0.74
CCNA1-203ENST00000625767 NMT2O60551 498 aa19.64■□□□□ 0.73
CCNA1-203ENST00000625767 MAP3K10Q02779 954 aa19.64■□□□□ 0.73
CCNA1-203ENST00000625767 CHADLQ6NUI6 762 aa19.64■□□□□ 0.73
CCNA1-203ENST00000625767 CLEC10AQ8IUN9 316 aa19.64■□□□□ 0.73
CCNA1-203ENST00000625767 NCOA7Q8NI08 942 aa19.64■□□□□ 0.73
CCNA1-203ENST00000625767 TRIM34Q9BYJ4 488 aa19.64■□□□□ 0.73
CCNA1-203ENST00000625767 ZNF408Q9H9D4 720 aa19.64■□□□□ 0.73
CCNA1-203ENST00000625767 GPHNQ9NQX3 736 aaPredicted RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms