RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 CNNM2Q9H8M5 875 aa17.67■□□□□ 0.42
ATRX-211ENST00000623321 R3HCC1Q9Y3T6 440 aaKnown RBP17.67■□□□□ 0.42
ATRX-211ENST00000623321 ELP1O95163 1332 aa17.67■□□□□ 0.42
ATRX-211ENST00000623321 WDR19Q8NEZ3 1342 aa17.67■□□□□ 0.42
ATRX-211ENST00000623321 TEKT1Q969V4 418 aa17.67■□□□□ 0.42
ATRX-211ENST00000623321 AGXT2Q9BYV1 514 aa17.67■□□□□ 0.42
ATRX-211ENST00000623321 ARPP21Q9UBL0 812 aaPredicted RBP17.67■□□□□ 0.42
ATRX-211ENST00000623321 MKRN1Q9UHC7 482 aaKnown RBP17.67■□□□□ 0.42
ATRX-211ENST00000623321 FER1L6Q2WGJ9 1857 aa17.66■□□□□ 0.42
ATRX-211ENST00000623321 TIAM2Q8IVF5 1701 aa17.66■□□□□ 0.42
ATRX-211ENST00000623321 VPS37CA5D8V6 355 aaPredicted RBP17.66■□□□□ 0.42
ATRX-211ENST00000623321 RHBDL3P58872 404 aa17.66■□□□□ 0.42
ATRX-211ENST00000623321 HDLBPQ00341 1268 aaKnown RBP17.66■□□□□ 0.42
ATRX-211ENST00000623321 NIM1KQ8IY84 436 aa17.66■□□□□ 0.42
ATRX-211ENST00000623321 NECAB1Q8N987 351 aa17.66■□□□□ 0.42
ATRX-211ENST00000623321 KRT23Q9C075 422 aa17.66■□□□□ 0.42
ATRX-211ENST00000623321 USP25Q9UHP3 1055 aa17.66■□□□□ 0.42
ATRX-211ENST00000623321 ZNRF3Q9ULT6 936 aa17.66■□□□□ 0.42
ATRX-211ENST00000623321 ZNF646O15015 1829 aaPredicted RBP17.65■□□□□ 0.42
ATRX-211ENST00000623321 SCNN1DP51172 638 aa17.65■□□□□ 0.42
ATRX-211ENST00000623321 CHST3Q7LGC8 479 aa17.65■□□□□ 0.42
ATRX-211ENST00000623321 KIAA0825Q8IV33 1275 aa17.65■□□□□ 0.42
ATRX-211ENST00000623321 TEX11Q8IYF3 940 aa17.65■□□□□ 0.42
ATRX-211ENST00000623321 TGFBRAP1Q8WUH2 860 aa17.65■□□□□ 0.42
ATRX-211ENST00000623321 LRRC2Q9BYS8 371 aa17.65■□□□□ 0.42
ATRX-211ENST00000623321 NEDD4P46934 1319 aa17.65■□□□□ 0.42
ATRX-211ENST00000623321 BAZ2AQ9UIF9 1905 aaKnown RBP17.65■□□□□ 0.42
ATRX-211ENST00000623321 B4E1Z4 1266 aa17.65■□□□□ 0.42
ATRX-211ENST00000623321 NFKBIEO00221 500 aa17.65■□□□□ 0.42
ATRX-211ENST00000623321 PRC1O43663 620 aa17.65■□□□□ 0.42
ATRX-211ENST00000623321 CRKP46108 304 aa17.65■□□□□ 0.42
ATRX-211ENST00000623321 KRT85P78386 507 aa17.65■□□□□ 0.42
ATRX-211ENST00000623321 LARP1BQ659C4 914 aaKnown RBP17.65■□□□□ 0.42
ATRX-211ENST00000623321 BRF1Q92994 677 aa17.65■□□□□ 0.42
ATRX-211ENST00000623321 INCENPQ9NQS7 918 aa17.65■□□□□ 0.42
ATRX-211ENST00000623321 MCM9Q9NXL9 1143 aa17.65■□□□□ 0.42
ATRX-211ENST00000623321 TACC3Q9Y6A5 838 aa17.65■□□□□ 0.42
ATRX-211ENST00000623321 MYO3BQ8WXR4 1341 aa17.64■□□□□ 0.41
ATRX-211ENST00000623321 LTBP3Q9NS15 1303 aa17.64■□□□□ 0.41
ATRX-211ENST00000623321 ADCY5O95622 1261 aa17.64■□□□□ 0.41
ATRX-211ENST00000623321 VIL1P09327 827 aaKnown RBP17.64■□□□□ 0.41
ATRX-211ENST00000623321 PCP11498 1178 aaKnown RBP17.64■□□□□ 0.41
ATRX-211ENST00000623321 ZDHHC15Q96MV8 337 aa17.64■□□□□ 0.41
ATRX-211ENST00000623321 COL4A5P29400 1685 aa17.64■□□□□ 0.41
ATRX-211ENST00000623321 CYP2D7A0A087X1C5 515 aa17.63■□□□□ 0.41
ATRX-211ENST00000623321 KDM4AO75164 1064 aa17.63■□□□□ 0.41
ATRX-211ENST00000623321 RAD17O75943 681 aa17.63■□□□□ 0.41
ATRX-211ENST00000623321 SLC3A2P08195 630 aaKnown RBP17.63■□□□□ 0.41
ATRX-211ENST00000623321 ANTXR2P58335 489 aa17.63■□□□□ 0.41
ATRX-211ENST00000623321 RSBN1LQ6PCB5 846 aaPredicted RBP17.63■□□□□ 0.41
ATRX-211ENST00000623321 SASS6Q6UVJ0 657 aa17.63■□□□□ 0.41
ATRX-211ENST00000623321 CYB5R4Q7L1T6 521 aa17.63■□□□□ 0.41
ATRX-211ENST00000623321 JDP2Q8WYK2 163 aa17.63■□□□□ 0.41
ATRX-211ENST00000623321 SERPINA10Q9UK55 444 aa17.63■□□□□ 0.41
ATRX-211ENST00000623321 PSME4Q14997 1843 aa17.63■□□□□ 0.41
ATRX-211ENST00000623321 FGRP09769 529 aa17.63■□□□□ 0.41
ATRX-211ENST00000623321 USP17L8P0C7I0 530 aa17.63■□□□□ 0.41
ATRX-211ENST00000623321 APOBEC3HQ6NTF7 200 aaKnown RBP17.63■□□□□ 0.41
ATRX-211ENST00000623321 CDC37L1Q7L3B6 337 aa17.63■□□□□ 0.41
ATRX-211ENST00000623321 MAPKAPK5Q8IW41 473 aa17.63■□□□□ 0.41
ATRX-211ENST00000623321 AMOTL1Q8IY63 956 aa17.63■□□□□ 0.41
ATRX-211ENST00000623321 FHDC1Q9C0D6 1143 aaPredicted RBP17.63■□□□□ 0.41
ATRX-211ENST00000623321 ZSWIM5Q9P217 1185 aa17.63■□□□□ 0.41
ATRX-211ENST00000623321 PSMD14O00487 310 aa17.62■□□□□ 0.41
ATRX-211ENST00000623321 GLIPR1L2Q4G1C9 344 aa17.62■□□□□ 0.41
ATRX-211ENST00000623321 C12orf60Q5U649 245 aa17.62■□□□□ 0.41
ATRX-211ENST00000623321 TTC6Q86TZ1 520 aa17.62■□□□□ 0.41
ATRX-211ENST00000623321 STK11IPQ8N1F8 1099 aa17.62■□□□□ 0.41
ATRX-211ENST00000623321 NKX2-3Q8TAU0 364 aa17.62■□□□□ 0.41
ATRX-211ENST00000623321 TMEM87BQ96K49 555 aa17.62■□□□□ 0.41
ATRX-211ENST00000623321 TOMM22Q9NS69 142 aa17.62■□□□□ 0.41
ATRX-211ENST00000623321 USP40Q9NVE5 1235 aa17.62■□□□□ 0.41
ATRX-211ENST00000623321 ARFGEF1Q9Y6D6 1849 aa17.62■□□□□ 0.41
ATRX-211ENST00000623321 SMIM22K7EJ46 135 aa17.61■□□□□ 0.41
ATRX-211ENST00000623321 CYP2D6P10635 497 aa17.61■□□□□ 0.41
ATRX-211ENST00000623321 EVCP57679 992 aa17.61■□□□□ 0.41
ATRX-211ENST00000623321 RRP12Q5JTH9 1297 aaKnown RBP17.61■□□□□ 0.41
ATRX-211ENST00000623321 PIBF1Q8WXW3 757 aa17.61■□□□□ 0.41
ATRX-211ENST00000623321 PDCL3Q9H2J4 239 aa17.61■□□□□ 0.41
ATRX-211ENST00000623321 FLT1P17948 1338 aa17.61■□□□□ 0.41
ATRX-211ENST00000623321 UQCRHLA0A096LP55 91 aa17.61■□□□□ 0.41
ATRX-211ENST00000623321 UQCRHP07919 91 aa17.61■□□□□ 0.41
ATRX-211ENST00000623321 APOBRQ0VD83 1088 aa17.61■□□□□ 0.41
ATRX-211ENST00000623321 CDC42EP5Q6NZY7 148 aa17.61■□□□□ 0.41
ATRX-211ENST00000623321 ESR2Q92731 530 aa17.61■□□□□ 0.41
ATRX-211ENST00000623321 ZNF274Q96GC6 653 aaPredicted RBP17.61■□□□□ 0.41
ATRX-211ENST00000623321 MTA3Q9BTC8 594 aa17.61■□□□□ 0.41
ATRX-211ENST00000623321 GOLGB1Q14789 3259 aaKnown RBP17.6■□□□□ 0.41
ATRX-211ENST00000623321 CDK5RAP2Q96SN8 1893 aa17.6■□□□□ 0.41
ATRX-211ENST00000623321 LAMB1P07942 1786 aa17.6■□□□□ 0.41
ATRX-211ENST00000623321 POLR3DP05423 398 aaPredicted RBP17.6■□□□□ 0.41
ATRX-211ENST00000623321 CCDC192P0DO97 292 aa17.6■□□□□ 0.41
ATRX-211ENST00000623321 RBM5P52756 815 aaKnown RBP eCLIP17.6■□□□□ 0.41
ATRX-211ENST00000623321 PDE4BQ07343 736 aa17.6■□□□□ 0.41
ATRX-211ENST00000623321 GMLQ99445 158 aa17.6■□□□□ 0.41
ATRX-211ENST00000623321 SCAND2PQ9GZW5 306 aaPredicted RBP17.6■□□□□ 0.41
ATRX-211ENST00000623321 ANGEL1Q9UNK9 670 aaKnown RBP17.6■□□□□ 0.41
ATRX-211ENST00000623321 DYNC1I1O14576 645 aa17.59■□□□□ 0.41
ATRX-211ENST00000623321 CXCL9Q07325 125 aa17.59■□□□□ 0.41
ATRX-211ENST00000623321 IGDCC4Q8TDY8 1250 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms