RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 MORF4L1Q9UBU8 362 aa18.36■□□□□ 0.53
SNX12-206ENST00000622259 RFX7Q2KHR2 1363 aa18.35■□□□□ 0.53
SNX12-206ENST00000622259 MYBBP1AQ9BQG0 1328 aaKnown RBP18.35■□□□□ 0.53
SNX12-206ENST00000622259 HMGCS2P54868 508 aa18.35■□□□□ 0.53
SNX12-206ENST00000622259 METTL24Q5JXM2 366 aa18.35■□□□□ 0.53
SNX12-206ENST00000622259 USP6NLQ92738 828 aa18.35■□□□□ 0.53
SNX12-206ENST00000622259 BADQ92934 168 aa18.35■□□□□ 0.53
SNX12-206ENST00000622259 NUDT12Q9BQG2 462 aa18.35■□□□□ 0.53
SNX12-206ENST00000622259 TXNRD2Q9NNW7 524 aa18.35■□□□□ 0.53
SNX12-206ENST00000622259 PDE8BO95263 885 aa18.34■□□□□ 0.53
SNX12-206ENST00000622259 SPP2Q13103 211 aa18.34■□□□□ 0.53
SNX12-206ENST00000622259 IDI2Q9BXS1 227 aa18.34■□□□□ 0.53
SNX12-206ENST00000622259 DDX4Q9NQI0 724 aaKnown RBP18.34■□□□□ 0.53
SNX12-206ENST00000622259 PRKAG2Q9UGJ0 569 aa18.34■□□□□ 0.53
SNX12-206ENST00000622259 MYH13Q9UKX3 1938 aa18.33■□□□□ 0.53
SNX12-206ENST00000622259 FAM196BA6NMK8 535 aa18.33■□□□□ 0.52
SNX12-206ENST00000622259 ZSCAN29Q8IWY8 852 aaPredicted RBP18.33■□□□□ 0.52
SNX12-206ENST00000622259 WDR66Q8TBY9 1149 aa18.33■□□□□ 0.52
SNX12-206ENST00000622259 SOCS4Q8WXH5 440 aa18.33■□□□□ 0.52
SNX12-206ENST00000622259 ATP11BQ9Y2G3 1177 aa18.33■□□□□ 0.52
SNX12-206ENST00000622259 ENTPD3O75355 529 aa18.32■□□□□ 0.52
SNX12-206ENST00000622259 FGFR2P21802 821 aa18.32■□□□□ 0.52
SNX12-206ENST00000622259 ADAMTS19Q8TE59 1207 aa18.32■□□□□ 0.52
SNX12-206ENST00000622259 PRDM5Q9NQX1 630 aaPredicted RBP18.32■□□□□ 0.52
SNX12-206ENST00000622259 RLFQ13129 1914 aa18.31■□□□□ 0.52
SNX12-206ENST00000622259 RRP1BQ14684 758 aaKnown RBP18.31■□□□□ 0.52
SNX12-206ENST00000622259 Q3C1V9 767 aa18.31■□□□□ 0.52
SNX12-206ENST00000622259 SH3RF1Q7Z6J0 888 aa18.31■□□□□ 0.52
SNX12-206ENST00000622259 ZNF280CQ8ND82 737 aa18.31■□□□□ 0.52
SNX12-206ENST00000622259 KLHDC4Q8TBB5 520 aa18.31■□□□□ 0.52
SNX12-206ENST00000622259 PPM1EQ8WY54 764 aa18.31■□□□□ 0.52
SNX12-206ENST00000622259 P2RX7Q99572 595 aaKnown RBP18.31■□□□□ 0.52
SNX12-206ENST00000622259 PORCNQ9H237 461 aa18.31■□□□□ 0.52
SNX12-206ENST00000622259 MORN1Q5T089 497 aa18.3■□□□□ 0.52
SNX12-206ENST00000622259 TRMT44Q8IYL2 757 aaKnown RBP18.3■□□□□ 0.52
SNX12-206ENST00000622259 ASB2Q96Q27 587 aa18.3■□□□□ 0.52
SNX12-206ENST00000622259 UHRF1Q96T88 793 aaPredicted RBP18.3■□□□□ 0.52
SNX12-206ENST00000622259 C9orf78Q9NZ63 289 aaPredicted RBP18.3■□□□□ 0.52
SNX12-206ENST00000622259 FLRT1Q9NZU1 646 aa18.3■□□□□ 0.52
SNX12-206ENST00000622259 KIF16BQ96L93 1317 aa18.29■□□□□ 0.52
SNX12-206ENST00000622259 SYNGAP1Q96PV0 1343 aa18.29■□□□□ 0.52
SNX12-206ENST00000622259 TRIM43BA6NCK2 446 aa18.29■□□□□ 0.52
SNX12-206ENST00000622259 EPHB4P54760 987 aa18.29■□□□□ 0.52
SNX12-206ENST00000622259 PABPC4Q13310 644 aaKnown RBP eCLIP18.29■□□□□ 0.526e-11■■■□□ 18.3
SNX12-206ENST00000622259 PICALMQ13492 652 aa18.29■□□□□ 0.52
SNX12-206ENST00000622259 SH3D19Q5HYK7 790 aa18.29■□□□□ 0.52
SNX12-206ENST00000622259 POTEEQ6S8J3 1075 aa18.29■□□□□ 0.52
SNX12-206ENST00000622259 GPR142Q7Z601 462 aa18.29■□□□□ 0.52
SNX12-206ENST00000622259 ATXN2LQ8WWM7 1075 aaKnown RBP18.29■□□□□ 0.52
SNX12-206ENST00000622259 TRIM43Q96BQ3 446 aaPredicted RBP18.29■□□□□ 0.52
SNX12-206ENST00000622259 CACNA1FO60840 1977 aa18.29■□□□□ 0.52
SNX12-206ENST00000622259 XIRP2A4UGR9 3374 aa18.28■□□□□ 0.52
SNX12-206ENST00000622259 MYH2Q9UKX2 1941 aa18.28■□□□□ 0.52
SNX12-206ENST00000622259 LDHBP07195 334 aaKnown RBP18.28■□□□□ 0.52
SNX12-206ENST00000622259 ITGB8P26012 769 aa18.28■□□□□ 0.52
SNX12-206ENST00000622259 RGS2P41220 211 aa18.28■□□□□ 0.52
SNX12-206ENST00000622259 PDE3AQ14432 1141 aa18.28■□□□□ 0.52
SNX12-206ENST00000622259 SLC39A5Q6ZMH5 540 aa18.28■□□□□ 0.52
SNX12-206ENST00000622259 GPRC5AQ8NFJ5 357 aa18.28■□□□□ 0.52
SNX12-206ENST00000622259 APBA2Q99767 749 aa18.28■□□□□ 0.52
SNX12-206ENST00000622259 BICC1Q9H694 974 aaKnown RBP18.28■□□□□ 0.52
SNX12-206ENST00000622259 PDLIM7Q9NR12 457 aa18.28■□□□□ 0.52
SNX12-206ENST00000622259 RBPJLQ9UBG7 517 aa18.28■□□□□ 0.52
SNX12-206ENST00000622259 DDX20Q9UHI6 824 aaKnown RBP18.28■□□□□ 0.52
SNX12-206ENST00000622259 ATAD5Q96QE3 1844 aa18.28■□□□□ 0.52
SNX12-206ENST00000622259 MYO9BQ13459 2157 aa18.27■□□□□ 0.52
SNX12-206ENST00000622259 DNM1LO00429 736 aa18.27■□□□□ 0.52
SNX12-206ENST00000622259 IFIT1P09914 478 aaKnown RBP18.27■□□□□ 0.52
SNX12-206ENST00000622259 PUM3Q15397 648 aaKnown RBP18.27■□□□□ 0.52
SNX12-206ENST00000622259 TRIM60Q495X7 471 aa18.27■□□□□ 0.52
SNX12-206ENST00000622259 GJC2Q5T442 439 aaPredicted RBP18.27■□□□□ 0.52
SNX12-206ENST00000622259 LPAR1Q92633 364 aa18.27■□□□□ 0.52
SNX12-206ENST00000622259 NECAB3Q96P71 396 aaPredicted RBP18.27■□□□□ 0.52
SNX12-206ENST00000622259 PIEZO1Q92508 2521 aa18.26■□□□□ 0.51
SNX12-206ENST00000622259 NBPF7P0C2Y1 421 aaPredicted RBP18.26■□□□□ 0.51
SNX12-206ENST00000622259 DNAJB2P25686 324 aa18.26■□□□□ 0.51
SNX12-206ENST00000622259 MAPK4P31152 587 aa18.26■□□□□ 0.51
SNX12-206ENST00000622259 HERVK_113P62684 666 aa18.26■□□□□ 0.51
SNX12-206ENST00000622259 IRX3P78415 501 aaPredicted RBP18.26■□□□□ 0.51
SNX12-206ENST00000622259 ANKRD44Q8N8A2 993 aa18.26■□□□□ 0.51
SNX12-206ENST00000622259 TRPV1Q8NER1 839 aa18.26■□□□□ 0.51
SNX12-206ENST00000622259 RNPC3Q96LT9 517 aaKnown RBP18.26■□□□□ 0.51
SNX12-206ENST00000622259 THEGQ9P2T0 379 aa18.26■□□□□ 0.51
SNX12-206ENST00000622259 GAKO14976 1311 aa18.25■□□□□ 0.51
SNX12-206ENST00000622259 TBC1D12O60347 775 aa18.25■□□□□ 0.51
SNX12-206ENST00000622259 VAMP4O75379 141 aa18.25■□□□□ 0.51
SNX12-206ENST00000622259 ERVK-9P63128 1117 aa18.25■□□□□ 0.51
SNX12-206ENST00000622259 ERVK-24P63145 666 aa18.25■□□□□ 0.51
SNX12-206ENST00000622259 RABL6Q3YEC7 729 aaPredicted RBP18.25■□□□□ 0.51
SNX12-206ENST00000622259 PLEKHH3Q7Z736 793 aa18.25■□□□□ 0.51
SNX12-206ENST00000622259 OSBPL5Q9H0X9 879 aaPredicted RBP18.25■□□□□ 0.51
SNX12-206ENST00000622259 ZNF576Q9H609 170 aa18.25■□□□□ 0.51
SNX12-206ENST00000622259 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.25■□□□□ 0.51
SNX12-206ENST00000622259 TCF20Q9UGU0 1960 aaKnown RBP18.24■□□□□ 0.51
SNX12-206ENST00000622259 HOXA7P31268 230 aaPredicted RBP18.24■□□□□ 0.51
SNX12-206ENST00000622259 MAP2K5Q13163 448 aa18.24■□□□□ 0.51
SNX12-206ENST00000622259 MTMR2Q13614 643 aa18.24■□□□□ 0.51
SNX12-206ENST00000622259 SNX17Q15036 470 aa18.24■□□□□ 0.51
SNX12-206ENST00000622259 NDUFB9Q9Y6M9 179 aa18.24■□□□□ 0.51
SNX12-206ENST00000622259 USP17L5A8MUK1 530 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms