RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 GADL1Q6ZQY3 521 aa3.06□□□□□ -1.92
CPNE3-211ENST00000621526 CCDC129Q6ZRS4 1044 aa3.06□□□□□ -1.92
CPNE3-211ENST00000621526 SLC44A5Q8NCS7 719 aa3.06□□□□□ -1.92
CPNE3-211ENST00000621526 ZNF521Q96K83 1311 aa3.06□□□□□ -1.92
CPNE3-211ENST00000621526 FAM84BQ96KN1 310 aaPredicted RBP3.06□□□□□ -1.92
CPNE3-211ENST00000621526 CCDC85AQ96PX6 553 aaPredicted RBP3.06□□□□□ -1.92
CPNE3-211ENST00000621526 UIMC1Q96RL1 719 aa3.06□□□□□ -1.92
CPNE3-211ENST00000621526 PLEKHF1Q96S99 279 aa3.06□□□□□ -1.92
CPNE3-211ENST00000621526 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.06□□□□□ -1.92
CPNE3-211ENST00000621526 UPF3BQ9BZI7 483 aaKnown RBP3.06□□□□□ -1.92
CPNE3-211ENST00000621526 MTIF3Q9H2K0 278 aaKnown RBP3.06□□□□□ -1.92
CPNE3-211ENST00000621526 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.06□□□□□ -1.92
CPNE3-211ENST00000621526 PRDM5Q9NQX1 630 aaPredicted RBP3.06□□□□□ -1.92
CPNE3-211ENST00000621526 TMEM39AQ9NV64 488 aa3.06□□□□□ -1.92
CPNE3-211ENST00000621526 CHPF2Q9P2E5 772 aa3.06□□□□□ -1.92
CPNE3-211ENST00000621526 RBPJLQ9UBG7 517 aa3.06□□□□□ -1.92
CPNE3-211ENST00000621526 PCDHA11Q9Y5I1 949 aa3.06□□□□□ -1.92
CPNE3-211ENST00000621526 ANKRD18BA2A2Z9 1011 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 SLC15A5A6NIM6 579 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 GRXCR1A8MXD5 290 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 C19orf81C9J6K1 198 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 SEPT4O43236 478 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 STRNO43815 780 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 GFRA3O60609 400 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 ENTPD3O75355 529 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 TAF5LO75529 589 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 DDX58O95786 925 aaKnown RBP3.05□□□□□ -1.92
CPNE3-211ENST00000621526 FGBP02675 491 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 ITGA6P23229 1130 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 ADCYAP1R1P41586 468 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 ID4P47928 161 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 CDK7P50613 346 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 CACNB3P54284 484 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 FAAP100Q0VG06 881 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 SPP2Q13103 211 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 SKIV2LQ15477 1246 aaKnown RBP3.05□□□□□ -1.92
CPNE3-211ENST00000621526 NBPF20Q3BBV1 942 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 Q3C1V9 767 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 LEXMQ3ZCV2 418 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 CC2D1BQ5T0F9 858 aaKnown RBP3.05□□□□□ -1.92
CPNE3-211ENST00000621526 GJC2Q5T442 439 aaPredicted RBP3.05□□□□□ -1.92
CPNE3-211ENST00000621526 HDGFL1Q5TGJ6 251 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 OLFML2BQ68BL8 750 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 PSRC1Q6PGN9 363 aaPredicted RBP3.05□□□□□ -1.92
CPNE3-211ENST00000621526 ZNF365Q70YC5 407 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 GPR142Q7Z601 462 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 FBXO33Q7Z6M2 555 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 PLEKHH3Q7Z736 793 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 CCAR1Q8IX12 1150 aaKnown RBP3.05□□□□□ -1.92
CPNE3-211ENST00000621526 TMEM199Q8N511 208 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 ZNF280CQ8ND82 737 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 ZNF428Q96B54 188 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 APBA2Q99767 749 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 MYD88Q99836 296 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 TSEN34Q9BSV6 310 aaKnown RBP3.05□□□□□ -1.92
CPNE3-211ENST00000621526 WDR18Q9BV38 432 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 IDI2Q9BXS1 227 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 ASCC2Q9H1I8 757 aaPredicted RBP3.05□□□□□ -1.92
CPNE3-211ENST00000621526 PRKAG3Q9UGI9 489 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 NRBP1Q9UHY1 535 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 PHF24Q9UPV7 400 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 DAGLAQ9Y4D2 1042 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 LRRFIP2Q9Y608 721 aaKnown RBP3.05□□□□□ -1.92
CPNE3-211ENST00000621526 CDH23Q9H251 3354 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 DNAH12Q6ZR08 3092 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 SCN9AQ15858 1988 aa3.05□□□□□ -1.92
CPNE3-211ENST00000621526 XIRP2A4UGR9 3374 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 ZDBF2Q9HCK1 2354 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 CFAP54Q96N23 3096 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 CHD9Q3L8U1 2897 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 MAST3O60307 1309 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 ELP1O95163 1332 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 EPG5Q9HCE0 2579 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 A0A1B0GUL7 405 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 GRXCR2A6NFK2 248 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 C19orf67A6NJJ6 358 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 SNAP23O00161 211 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 ZBTB22O15209 634 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 NPM3O75607 178 aaKnown RBP3.04□□□□□ -1.92
CPNE3-211ENST00000621526 KRT37O76014 449 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 PTPREP23469 700 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 CNGA1P29973 690 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 RIPK4P57078 832 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 CCNA1P78396 465 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 LMOD3Q0VAK6 560 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 NEXNQ0ZGT2 675 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 IFIT5Q13325 482 aaKnown RBP3.04□□□□□ -1.92
CPNE3-211ENST00000621526 LRRC41Q15345 812 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 CCL14Q16627 93 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 TREML2Q5T2D2 321 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 CDC42EP5Q6NZY7 148 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 KSR2Q6VAB6 950 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 HFE2Q6ZVN8 426 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 RNF180Q86T96 592 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 RPUSD2Q8IZ73 545 aaKnown RBP3.04□□□□□ -1.92
CPNE3-211ENST00000621526 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.04□□□□□ -1.92
CPNE3-211ENST00000621526 PHOSPHO2Q8TCD6 241 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 NUP133Q8WUM0 1156 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 JARID2Q92833 1246 aaPredicted RBP3.04□□□□□ -1.92
CPNE3-211ENST00000621526 EDAQ92838 391 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms