RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 TMTC2Q8N394 836 aa23.48■■□□□ 1.35
MMP28-207ENST00000619655 PGBD1Q96JS3 809 aa23.48■■□□□ 1.35
MMP28-207ENST00000619655 COL11A2P13942 1736 aaPredicted RBP23.47■■□□□ 1.35
MMP28-207ENST00000619655 MROH7-TTC4A0A0A0MT08 1334 aa23.47■■□□□ 1.35
MMP28-207ENST00000619655 ZBTB22O15209 634 aa23.47■■□□□ 1.35
MMP28-207ENST00000619655 TMED8Q6PL24 325 aaPredicted RBP23.47■■□□□ 1.35
MMP28-207ENST00000619655 TGFBRAP1Q8WUH2 860 aa23.47■■□□□ 1.35
MMP28-207ENST00000619655 ZNF396Q96N95 335 aaPredicted RBP23.47■■□□□ 1.35
MMP28-207ENST00000619655 TSPY26PQ9H489 355 aa23.47■■□□□ 1.35
MMP28-207ENST00000619655 SLC3A2P08195 630 aaKnown RBP23.47■■□□□ 1.35
MMP28-207ENST00000619655 ALDH1B1P30837 517 aa23.47■■□□□ 1.35
MMP28-207ENST00000619655 GTF2IP78347 998 aa23.47■■□□□ 1.35
MMP28-207ENST00000619655 SSRP1Q08945 709 aaKnown RBP23.47■■□□□ 1.35
MMP28-207ENST00000619655 SEC23AQ15436 765 aa23.47■■□□□ 1.35
MMP28-207ENST00000619655 IFIT1BQ5T764 474 aaKnown RBP23.47■■□□□ 1.35
MMP28-207ENST00000619655 MPNDQ8N594 471 aa23.47■■□□□ 1.35
MMP28-207ENST00000619655 KIAA1551Q9HCM1 1747 aa23.46■■□□□ 1.35
MMP28-207ENST00000619655 LTBP1Q14766 1721 aa23.46■■□□□ 1.35
MMP28-207ENST00000619655 NMT2O60551 498 aa23.46■■□□□ 1.35
MMP28-207ENST00000619655 LDHCP07864 332 aa23.46■■□□□ 1.35
MMP28-207ENST00000619655 PRKCSHP14314 528 aaPredicted RBP23.46■■□□□ 1.35
MMP28-207ENST00000619655 DPP8Q6V1X1 898 aaPredicted RBP23.46■■□□□ 1.35
MMP28-207ENST00000619655 ECM29Q5VYK3 1845 aa23.46■■□□□ 1.35
MMP28-207ENST00000619655 KIF28PB7ZC32 967 aa23.45■■□□□ 1.35
MMP28-207ENST00000619655 BTDP43251 543 aa23.45■■□□□ 1.35
MMP28-207ENST00000619655 MASTLQ96GX5 879 aa23.45■■□□□ 1.35
MMP28-207ENST00000619655 MTA3Q9BTC8 594 aa23.45■■□□□ 1.35
MMP28-207ENST00000619655 ZC3H12CQ9C0D7 883 aaKnown RBP23.45■■□□□ 1.35
MMP28-207ENST00000619655 TMX4Q9H1E5 349 aaPredicted RBP23.45■■□□□ 1.35
MMP28-207ENST00000619655 CAMK4Q16566 473 aa23.45■■□□□ 1.34
MMP28-207ENST00000619655 MAPKAPK5Q8IW41 473 aa23.45■■□□□ 1.34
MMP28-207ENST00000619655 RTFDC1Q9BY42 306 aaPredicted RBP23.45■■□□□ 1.34
MMP28-207ENST00000619655 PCP11498 1178 aaKnown RBP23.44■■□□□ 1.34
MMP28-207ENST00000619655 PDE4BQ07343 736 aa23.44■■□□□ 1.34
MMP28-207ENST00000619655 DOK7Q18PE1 504 aa23.44■■□□□ 1.34
MMP28-207ENST00000619655 FANCBQ8NB91 859 aa23.44■■□□□ 1.34
MMP28-207ENST00000619655 ZNF219Q9P2Y4 722 aaPredicted RBP23.44■■□□□ 1.34
MMP28-207ENST00000619655 SAP30BPQ9UHR5 308 aaKnown RBP23.44■■□□□ 1.34
MMP28-207ENST00000619655 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.44■■□□□ 1.34
MMP28-207ENST00000619655 F8W031 263 aaPredicted RBP23.44■■□□□ 1.34
MMP28-207ENST00000619655 FGRP09769 529 aa23.44■■□□□ 1.34
MMP28-207ENST00000619655 GNL2Q13823 731 aaKnown RBP23.44■■□□□ 1.34
MMP28-207ENST00000619655 TRIM29Q14134 588 aa23.44■■□□□ 1.34
MMP28-207ENST00000619655 SBK1Q52WX2 424 aa23.44■■□□□ 1.34
MMP28-207ENST00000619655 KRT40Q6A162 431 aa23.44■■□□□ 1.34
MMP28-207ENST00000619655 DYNLL2Q96FJ2 89 aa23.44■■□□□ 1.34
MMP28-207ENST00000619655 DACT1Q9NYF0 836 aa23.44■■□□□ 1.34
MMP28-207ENST00000619655 TSPY2A6NKD2 308 aa23.43■■□□□ 1.34
MMP28-207ENST00000619655 GUCY1A2P33402 732 aa23.43■■□□□ 1.34
MMP28-207ENST00000619655 KIF23Q02241 960 aaPredicted RBP23.43■■□□□ 1.34
MMP28-207ENST00000619655 SLC15A2Q16348 729 aa23.43■■□□□ 1.34
MMP28-207ENST00000619655 C2CD5Q86YS7 1000 aa23.43■■□□□ 1.34
MMP28-207ENST00000619655 ANP32BQ92688 251 aaKnown RBP23.43■■□□□ 1.34
MMP28-207ENST00000619655 FMNL1O95466 1100 aaPredicted RBP23.43■■□□□ 1.34
MMP28-207ENST00000619655 IFNAR1P17181 557 aa23.43■■□□□ 1.34
MMP28-207ENST00000619655 TRIM22Q8IYM9 498 aa23.43■■□□□ 1.34
MMP28-207ENST00000619655 G3V3G9 751 aa23.42■■□□□ 1.34
MMP28-207ENST00000619655 LETM1O95202 739 aaPredicted RBP23.42■■□□□ 1.34
MMP28-207ENST00000619655 DCAF8Q5TAQ9 597 aa23.42■■□□□ 1.34
MMP28-207ENST00000619655 CATIPQ7Z7H3 387 aa23.42■■□□□ 1.34
MMP28-207ENST00000619655 TBC1D22AQ8WUA7 517 aa23.42■■□□□ 1.34
MMP28-207ENST00000619655 MKRN1Q9UHC7 482 aaKnown RBP23.42■■□□□ 1.34
MMP28-207ENST00000619655 CCDC196A0A1B0GTZ2 297 aa23.42■■□□□ 1.34
MMP28-207ENST00000619655 ORC4O43929 436 aa23.42■■□□□ 1.34
MMP28-207ENST00000619655 ME1P48163 572 aa23.42■■□□□ 1.34
MMP28-207ENST00000619655 C12orf60Q5U649 245 aa23.42■■□□□ 1.34
MMP28-207ENST00000619655 AMOTL1Q8IY63 956 aa23.42■■□□□ 1.34
MMP28-207ENST00000619655 RCOR1Q9UKL0 485 aa23.42■■□□□ 1.34
MMP28-207ENST00000619655 NID2Q14112 1375 aa23.41■■□□□ 1.34
MMP28-207ENST00000619655 NR1I2O75469 434 aa23.41■■□□□ 1.34
MMP28-207ENST00000619655 PPP4CP60510 307 aa23.41■■□□□ 1.34
MMP28-207ENST00000619655 COA1Q9GZY4 146 aa23.41■■□□□ 1.34
MMP28-207ENST00000619655 MYSM1Q5VVJ2 828 aa23.41■■□□□ 1.34
MMP28-207ENST00000619655 ATL3Q6DD88 541 aa23.41■■□□□ 1.34
MMP28-207ENST00000619655 BRAPQ7Z569 592 aa23.41■■□□□ 1.34
MMP28-207ENST00000619655 TEX11Q8IYF3 940 aa23.41■■□□□ 1.34
MMP28-207ENST00000619655 MXD3Q9BW11 206 aa23.41■■□□□ 1.34
MMP28-207ENST00000619655 NUP62CLQ9H1M0 184 aa23.41■■□□□ 1.34
MMP28-207ENST00000619655 STK32BQ9NY57 414 aa23.41■■□□□ 1.34
MMP28-207ENST00000619655 CLIC4Q9Y696 253 aa23.41■■□□□ 1.34
MMP28-207ENST00000619655 NAV1Q8NEY1 1877 aa23.4■■□□□ 1.34
MMP28-207ENST00000619655 CAMKK2Q96RR4 588 aa23.4■■□□□ 1.34
MMP28-207ENST00000619655 STK36Q9NRP7 1315 aa23.4■■□□□ 1.34
MMP28-207ENST00000619655 H0YIN7 160 aa23.39■■□□□ 1.34
MMP28-207ENST00000619655 CHRNA5P30532 468 aa23.39■■□□□ 1.34
MMP28-207ENST00000619655 CRACR2BQ8N4Y2 399 aaPredicted RBP23.39■■□□□ 1.34
MMP28-207ENST00000619655 MKNK2Q9HBH9 465 aa23.39■■□□□ 1.34
MMP28-207ENST00000619655 RGPD3A6NKT7 1758 aaPredicted RBP23.39■■□□□ 1.33
MMP28-207ENST00000619655 RGPD4Q7Z3J3 1758 aa23.39■■□□□ 1.33
MMP28-207ENST00000619655 GPR75-ASB3A0A0A6YYF3 556 aa23.39■■□□□ 1.33
MMP28-207ENST00000619655 IGSF3O75054 1194 aa23.39■■□□□ 1.33
MMP28-207ENST00000619655 PLCD1P51178 756 aa23.39■■□□□ 1.33
MMP28-207ENST00000619655 NBPF11Q86T75 865 aa23.39■■□□□ 1.33
MMP28-207ENST00000619655 STK38Q15208 465 aa23.38■■□□□ 1.33
MMP28-207ENST00000619655 SLC44A5Q8NCS7 719 aa23.38■■□□□ 1.33
MMP28-207ENST00000619655 WASF1Q92558 559 aa23.38■■□□□ 1.33
MMP28-207ENST00000619655 hCG_1642624A0A1W2PR95 340 aa23.38■■□□□ 1.33
MMP28-207ENST00000619655 TFAP4Q01664 338 aa23.38■■□□□ 1.33
MMP28-207ENST00000619655 SF3A1Q15459 793 aaKnown RBP23.38■■□□□ 1.33
MMP28-207ENST00000619655 CCAR1Q8IX12 1150 aaKnown RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms