RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 PLXNA1Q9UIW2 1896 aa5.79□□□□□ -1.48
SNCA-213ENST00000618500 CIAO1O76071 339 aa5.78□□□□□ -1.48
SNCA-213ENST00000618500 ZKSCAN1P17029 563 aaPredicted RBP5.78□□□□□ -1.48
SNCA-213ENST00000618500 GYG1P46976 350 aa5.78□□□□□ -1.48
SNCA-213ENST00000618500 JARID2Q92833 1246 aaPredicted RBP5.78□□□□□ -1.48
SNCA-213ENST00000618500 C12orf42Q96LP6 360 aa5.78□□□□□ -1.48
SNCA-213ENST00000618500 COL4A4P53420 1690 aaPredicted RBP5.78□□□□□ -1.48
SNCA-213ENST00000618500 KIAA0355O15063 1070 aa5.78□□□□□ -1.48
SNCA-213ENST00000618500 NUDT12Q9BQG2 462 aa5.78□□□□□ -1.48
SNCA-213ENST00000618500 TTYH1Q9H313 450 aaPredicted RBP5.78□□□□□ -1.48
SNCA-213ENST00000618500 LAS1LQ9Y4W2 734 aaKnown RBP5.78□□□□□ -1.48
SNCA-213ENST00000618500 DOCK3Q8IZD9 2030 aa5.78□□□□□ -1.48
SNCA-213ENST00000618500 SLC15A5A6NIM6 579 aa5.77□□□□□ -1.49
SNCA-213ENST00000618500 C19orf81C9J6K1 198 aa5.77□□□□□ -1.49
SNCA-213ENST00000618500 TWISTNBQ3B726 338 aaPredicted RBP5.77□□□□□ -1.49
SNCA-213ENST00000618500 RASIP1Q5U651 963 aa5.77□□□□□ -1.49
SNCA-213ENST00000618500 TMED8Q6PL24 325 aaPredicted RBP5.77□□□□□ -1.49
SNCA-213ENST00000618500 LMBR1LQ6UX01 489 aa5.77□□□□□ -1.49
SNCA-213ENST00000618500 GADL1Q6ZQY3 521 aa5.77□□□□□ -1.49
SNCA-213ENST00000618500 DDX20Q9UHI6 824 aaKnown RBP5.77□□□□□ -1.49
SNCA-213ENST00000618500 HERC5Q9UII4 1024 aaKnown RBP5.77□□□□□ -1.49
SNCA-213ENST00000618500 NAV1Q8NEY1 1877 aa5.77□□□□□ -1.49
SNCA-213ENST00000618500 PRKAR2AP13861 404 aaKnown RBP5.77□□□□□ -1.49
SNCA-213ENST00000618500 FOSL2P15408 326 aa5.77□□□□□ -1.49
SNCA-213ENST00000618500 POU3F3P20264 500 aaPredicted RBP5.77□□□□□ -1.49
SNCA-213ENST00000618500 VASPP50552 380 aaPredicted RBP5.77□□□□□ -1.49
SNCA-213ENST00000618500 CACNB2Q08289 660 aaPredicted RBP5.77□□□□□ -1.49
SNCA-213ENST00000618500 ZNF280CQ8ND82 737 aa5.77□□□□□ -1.49
SNCA-213ENST00000618500 SMCR8Q8TEV9 937 aaPredicted RBP5.77□□□□□ -1.49
SNCA-213ENST00000618500 ASB2Q96Q27 587 aa5.77□□□□□ -1.49
SNCA-213ENST00000618500 ZHX2Q9Y6X8 837 aa5.77□□□□□ -1.49
SNCA-213ENST00000618500 TANC1Q9C0D5 1861 aa5.77□□□□□ -1.49
SNCA-213ENST00000618500 IFIT1P09914 478 aaKnown RBP5.77□□□□□ -1.49
SNCA-213ENST00000618500 PDE3AQ14432 1141 aa5.77□□□□□ -1.49
SNCA-213ENST00000618500 TAF7LQ5H9L4 462 aa5.77□□□□□ -1.49
SNCA-213ENST00000618500 EPHA10Q5JZY3 1008 aa5.77□□□□□ -1.49
SNCA-213ENST00000618500 G2E3Q7L622 706 aa5.77□□□□□ -1.49
SNCA-213ENST00000618500 SH3BP5LQ7L8J4 393 aa5.77□□□□□ -1.49
SNCA-213ENST00000618500 TSPYL6Q8N831 410 aa5.77□□□□□ -1.49
SNCA-213ENST00000618500 LPIN2Q92539 896 aa5.77□□□□□ -1.49
SNCA-213ENST00000618500 ASCC2Q9H1I8 757 aaPredicted RBP5.77□□□□□ -1.49
SNCA-213ENST00000618500 DENND2AQ9ULE3 1009 aa5.77□□□□□ -1.49
SNCA-213ENST00000618500 ADAMTS8Q9UP79 889 aa5.77□□□□□ -1.49
SNCA-213ENST00000618500 COL4A6Q14031 1691 aa5.77□□□□□ -1.49
SNCA-213ENST00000618500 MYH1P12882 1939 aa5.76□□□□□ -1.49
SNCA-213ENST00000618500 GLRX3O76003 335 aaKnown RBP5.76□□□□□ -1.49
SNCA-213ENST00000618500 MYCP01106 439 aaPredicted RBP5.76□□□□□ -1.49
SNCA-213ENST00000618500 SLC5A1P13866 664 aa5.76□□□□□ -1.49
SNCA-213ENST00000618500 RTP1P59025 263 aa5.76□□□□□ -1.49
SNCA-213ENST00000618500 MAP2K5Q13163 448 aa5.76□□□□□ -1.49
SNCA-213ENST00000618500 TREML2Q5T2D2 321 aa5.76□□□□□ -1.49
SNCA-213ENST00000618500 ANKRD13CQ8N6S4 541 aa5.76□□□□□ -1.49
SNCA-213ENST00000618500 GPRC5AQ8NFJ5 357 aa5.76□□□□□ -1.49
SNCA-213ENST00000618500 KAZALD1Q96I82 304 aa5.76□□□□□ -1.49
SNCA-213ENST00000618500 CXXC1Q9P0U4 656 aaPredicted RBP5.76□□□□□ -1.49
SNCA-213ENST00000618500 THEGQ9P2T0 379 aa5.76□□□□□ -1.49
SNCA-213ENST00000618500 PHF24Q9UPV7 400 aa5.76□□□□□ -1.49
SNCA-213ENST00000618500 MROH7-TTC4A0A0A0MT08 1334 aa5.76□□□□□ -1.49
SNCA-213ENST00000618500 USP17L5A8MUK1 530 aa5.76□□□□□ -1.49
SNCA-213ENST00000618500 SYN1P17600 705 aa5.76□□□□□ -1.49
SNCA-213ENST00000618500 GRB14Q14449 540 aa5.76□□□□□ -1.49
SNCA-213ENST00000618500 MFSD14CQ5VZR4 134 aa5.76□□□□□ -1.49
SNCA-213ENST00000618500 CCDC174Q6PII3 467 aa5.76□□□□□ -1.49
SNCA-213ENST00000618500 SLC39A5Q6ZMH5 540 aa5.76□□□□□ -1.49
SNCA-213ENST00000618500 WDR63Q8IWG1 891 aa5.76□□□□□ -1.49
SNCA-213ENST00000618500 CCDC146Q8IYE0 955 aa5.76□□□□□ -1.49
SNCA-213ENST00000618500 ANKRD44Q8N8A2 993 aa5.76□□□□□ -1.49
SNCA-213ENST00000618500 SHCBP1Q8NEM2 672 aa5.76□□□□□ -1.49
SNCA-213ENST00000618500 PDLIM7Q9NR12 457 aa5.76□□□□□ -1.49
SNCA-213ENST00000618500 GPR75-ASB3A0A0A6YYF3 556 aa5.75□□□□□ -1.49
SNCA-213ENST00000618500 SNAP23O00161 211 aa5.75□□□□□ -1.49
SNCA-213ENST00000618500 CYBAP13498 195 aa5.75□□□□□ -1.49
SNCA-213ENST00000618500 CACNB3P54284 484 aa5.75□□□□□ -1.49
SNCA-213ENST00000618500 NKX3-2P78367 333 aa5.75□□□□□ -1.49
SNCA-213ENST00000618500 MRPS5P82675 430 aaKnown RBP5.75□□□□□ -1.49
SNCA-213ENST00000618500 SPTY2D1Q68D10 685 aaPredicted RBP5.75□□□□□ -1.49
SNCA-213ENST00000618500 PLEKHH3Q7Z736 793 aa5.75□□□□□ -1.49
SNCA-213ENST00000618500 ABRAQ8N0Z2 381 aa5.75□□□□□ -1.49
SNCA-213ENST00000618500 ARRDC4Q8NCT1 418 aa5.75□□□□□ -1.49
SNCA-213ENST00000618500 CCER1Q8TC90 406 aaPredicted RBP5.75□□□□□ -1.49
SNCA-213ENST00000618500 MYLIPQ8WY64 445 aa5.75□□□□□ -1.49
SNCA-213ENST00000618500 SEZ6LQ9BYH1 1024 aa5.75□□□□□ -1.49
SNCA-213ENST00000618500 USP40Q9NVE5 1235 aa5.75□□□□□ -1.49
SNCA-213ENST00000618500 LRRFIP2Q9Y608 721 aaKnown RBP5.75□□□□□ -1.49
SNCA-213ENST00000618500 GREB1LQ9C091 1923 aaPredicted RBP5.75□□□□□ -1.49
SNCA-213ENST00000618500 TRIOBPQ9H2D6 2365 aa5.75□□□□□ -1.49
SNCA-213ENST00000618500 LDHBP07195 334 aaKnown RBP5.75□□□□□ -1.49
SNCA-213ENST00000618500 CAP2P40123 477 aa5.75□□□□□ -1.49
SNCA-213ENST00000618500 RGS3P49796 1198 aa5.75□□□□□ -1.49
SNCA-213ENST00000618500 MAP3K12Q12852 859 aa5.75□□□□□ -1.49
SNCA-213ENST00000618500 NFIAQ12857 509 aa5.75□□□□□ -1.49
SNCA-213ENST00000618500 TRIM32Q13049 653 aa5.75□□□□□ -1.49
SNCA-213ENST00000618500 MIGA2Q7L4E1 593 aa5.75□□□□□ -1.49
SNCA-213ENST00000618500 VPS37DQ86XT2 251 aa5.75□□□□□ -1.49
SNCA-213ENST00000618500 TOX2Q96NM4 488 aa5.75□□□□□ -1.49
SNCA-213ENST00000618500 TSEN34Q9BSV6 310 aaKnown RBP5.75□□□□□ -1.49
SNCA-213ENST00000618500 GNL3LQ9NVN8 582 aaKnown RBP5.75□□□□□ -1.49
SNCA-213ENST00000618500 PRKAG2Q9UGJ0 569 aa5.75□□□□□ -1.49
SNCA-213ENST00000618500 RABGAP1Q9Y3P9 1069 aa5.75□□□□□ -1.49
SNCA-213ENST00000618500 RFX5P48382 616 aaPredicted RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms