RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 CACNB3P54284 484 aa14.01□□□□□ -0.17
SRRT-216ENST00000618262 KIAA2012Q0VF49 1180 aa14.01□□□□□ -0.17
SRRT-216ENST00000618262 VPS53Q5VIR6 699 aa14.01□□□□□ -0.17
SRRT-216ENST00000618262 NIM1KQ8IY84 436 aa14.01□□□□□ -0.17
SRRT-216ENST00000618262 ZNF532Q9HCE3 1301 aa14.01□□□□□ -0.17
SRRT-216ENST00000618262 CHMLP26374 656 aa14.01□□□□□ -0.17
SRRT-216ENST00000618262 DYNLL1P63167 89 aaKnown RBP14.01□□□□□ -0.17
SRRT-216ENST00000618262 TMC4Q7Z404 712 aa14.01□□□□□ -0.17
SRRT-216ENST00000618262 DZIP1Q86YF9 867 aaKnown RBP14.01□□□□□ -0.17
SRRT-216ENST00000618262 TDRD7Q8NHU6 1098 aaKnown RBP14.01□□□□□ -0.17
SRRT-216ENST00000618262 ZNF384Q8TF68 577 aa14.01□□□□□ -0.17
SRRT-216ENST00000618262 IRAK4Q9NWZ3 460 aa14.01□□□□□ -0.17
SRRT-216ENST00000618262 PAXBP1Q9Y5B6 917 aa14.01□□□□□ -0.17
SRRT-216ENST00000618262 COL4A5P29400 1685 aa14□□□□□ -0.17
SRRT-216ENST00000618262 PSMD14O00487 310 aa14□□□□□ -0.17
SRRT-216ENST00000618262 RAD51AP2Q09MP3 1159 aa14□□□□□ -0.17
SRRT-216ENST00000618262 ERCC4Q92889 916 aaPredicted RBP14□□□□□ -0.17
SRRT-216ENST00000618262 AATFQ9NY61 560 aaKnown RBP eCLIP14□□□□□ -0.17
SRRT-216ENST00000618262 SUGT1Q9Y2Z0 365 aa14□□□□□ -0.17
SRRT-216ENST00000618262 CYP7A1P22680 504 aa14□□□□□ -0.17
SRRT-216ENST00000618262 MECOMQ03112 1051 aa14□□□□□ -0.17
SRRT-216ENST00000618262 KBTBD3Q8NAB2 608 aa14□□□□□ -0.17
SRRT-216ENST00000618262 OSBP2Q969R2 916 aa14□□□□□ -0.17
SRRT-216ENST00000618262 DENND2AQ9ULE3 1009 aa14□□□□□ -0.17
SRRT-216ENST00000618262 M0R2C6 588 aa13.99□□□□□ -0.17
SRRT-216ENST00000618262 CDC45O75419 566 aa13.99□□□□□ -0.17
SRRT-216ENST00000618262 SKILP12757 684 aa13.99□□□□□ -0.17
SRRT-216ENST00000618262 ARMT1Q9H993 441 aa13.99□□□□□ -0.17
SRRT-216ENST00000618262 TTF2Q9UNY4 1162 aaKnown RBP13.99□□□□□ -0.17
SRRT-216ENST00000618262 ERICH4A6NGS2 130 aa13.99□□□□□ -0.17
SRRT-216ENST00000618262 SMIM22K7EJ46 135 aa13.99□□□□□ -0.17
SRRT-216ENST00000618262 PRKAB2O43741 272 aa13.99□□□□□ -0.17
SRRT-216ENST00000618262 LDHBP07195 334 aaKnown RBP13.99□□□□□ -0.17
SRRT-216ENST00000618262 CXCL9Q07325 125 aa13.99□□□□□ -0.17
SRRT-216ENST00000618262 CCDC91Q7Z6B0 441 aa13.99□□□□□ -0.17
SRRT-216ENST00000618262 COA1Q9GZY4 146 aa13.99□□□□□ -0.17
SRRT-216ENST00000618262 MED23Q9ULK4 1368 aa13.98□□□□□ -0.17
SRRT-216ENST00000618262 RAD50Q92878 1312 aa13.98□□□□□ -0.17
SRRT-216ENST00000618262 ECEL1O95672 775 aa13.98□□□□□ -0.17
SRRT-216ENST00000618262 PDE6AP16499 860 aa13.98□□□□□ -0.17
SRRT-216ENST00000618262 C9orf131Q5VYM1 1079 aa13.98□□□□□ -0.17
SRRT-216ENST00000618262 SPRYD3Q8NCJ5 442 aa13.98□□□□□ -0.17
SRRT-216ENST00000618262 ARPC5LQ9BPX5 153 aa13.98□□□□□ -0.17
SRRT-216ENST00000618262 RANBP17Q9H2T7 1088 aaKnown RBP13.98□□□□□ -0.17
SRRT-216ENST00000618262 AOX1Q06278 1338 aa13.98□□□□□ -0.17
SRRT-216ENST00000618262 EGFRP00533 1210 aa13.98□□□□□ -0.17
SRRT-216ENST00000618262 SLURP2P0DP57 97 aa13.98□□□□□ -0.17
SRRT-216ENST00000618262 ERCC3P19447 782 aa13.98□□□□□ -0.17
SRRT-216ENST00000618262 EVX2Q03828 476 aa13.98□□□□□ -0.17
SRRT-216ENST00000618262 SDR42E1Q8WUS8 393 aa13.98□□□□□ -0.17
SRRT-216ENST00000618262 RIOK3O14730 519 aaKnown RBP13.98□□□□□ -0.17
SRRT-216ENST00000618262 CD151P48509 253 aa13.98□□□□□ -0.17
SRRT-216ENST00000618262 NASPP49321 788 aaPredicted RBP13.98□□□□□ -0.17
SRRT-216ENST00000618262 ZNF541Q9H0D2 1346 aa13.97□□□□□ -0.17
SRRT-216ENST00000618262 PPFIA4O75335 1185 aa13.97□□□□□ -0.17
SRRT-216ENST00000618262 DDNO94850 711 aaPredicted RBP13.97□□□□□ -0.17
SRRT-216ENST00000618262 PTH1RQ03431 593 aa13.97□□□□□ -0.17
SRRT-216ENST00000618262 MAP3K12Q12852 859 aa13.97□□□□□ -0.17
SRRT-216ENST00000618262 NAA16Q6N069 864 aaPredicted RBP13.97□□□□□ -0.17
SRRT-216ENST00000618262 TSC1Q92574 1164 aa13.97□□□□□ -0.17
SRRT-216ENST00000618262 RMI1Q9H9A7 625 aa13.97□□□□□ -0.17
SRRT-216ENST00000618262 ZKSCAN5Q9Y2L8 839 aa13.97□□□□□ -0.17
SRRT-216ENST00000618262 CHD4Q14839 1912 aa13.97□□□□□ -0.17
SRRT-216ENST00000618262 GOLGA6L6A8MZA4 724 aa13.97□□□□□ -0.17
SRRT-216ENST00000618262 SMAPO00193 183 aa13.97□□□□□ -0.17
SRRT-216ENST00000618262 IL1R1P14778 569 aa13.97□□□□□ -0.17
SRRT-216ENST00000618262 KLHL23Q8NBE8 558 aa13.97□□□□□ -0.17
SRRT-216ENST00000618262 USP17L3A6NCW0 530 aa13.96□□□□□ -0.17
SRRT-216ENST00000618262 USP17L4A6NCW7 530 aa13.96□□□□□ -0.17
SRRT-216ENST00000618262 MBD4O95243 580 aa13.96□□□□□ -0.17
SRRT-216ENST00000618262 CASQ1P31415 396 aa13.96□□□□□ -0.17
SRRT-216ENST00000618262 HAND2P61296 217 aa13.96□□□□□ -0.17
SRRT-216ENST00000618262 PUS10Q3MIT2 529 aaKnown RBP13.96□□□□□ -0.17
SRRT-216ENST00000618262 MAP9Q49MG5 647 aa13.96□□□□□ -0.17
SRRT-216ENST00000618262 USP17L1Q7RTZ2 530 aa13.96□□□□□ -0.17
SRRT-216ENST00000618262 RTFDC1Q9BY42 306 aaPredicted RBP13.96□□□□□ -0.17
SRRT-216ENST00000618262 ZNF232Q9UNY5 417 aa13.96□□□□□ -0.17
SRRT-216ENST00000618262 MYO5AQ9Y4I1 1855 aaKnown RBP13.96□□□□□ -0.17
SRRT-216ENST00000618262 RNF113AO15541 343 aaKnown RBP13.96□□□□□ -0.17
SRRT-216ENST00000618262 CAPN15O75808 1086 aa13.96□□□□□ -0.17
SRRT-216ENST00000618262 PICALMQ13492 652 aa13.96□□□□□ -0.17
SRRT-216ENST00000618262 LCORLQ8N3X6 602 aa13.96□□□□□ -0.17
SRRT-216ENST00000618262 ZNRF3Q9ULT6 936 aa13.96□□□□□ -0.17
SRRT-216ENST00000618262 CLRN2A0PK11 232 aa13.95□□□□□ -0.18
SRRT-216ENST00000618262 ZSCAN26Q16670 478 aa13.95□□□□□ -0.18
SRRT-216ENST00000618262 DLK2Q6UY11 383 aa13.95□□□□□ -0.18
SRRT-216ENST00000618262 SAMD7Q7Z3H4 446 aa13.95□□□□□ -0.18
SRRT-216ENST00000618262 PODNQ7Z5L7 613 aa13.95□□□□□ -0.18
SRRT-216ENST00000618262 SUPT20HQ8NEM7 779 aa13.95□□□□□ -0.18
SRRT-216ENST00000618262 KIAA1551Q9HCM1 1747 aa13.95□□□□□ -0.18
SRRT-216ENST00000618262 LONRF3Q496Y0 759 aa13.95□□□□□ -0.18
SRRT-216ENST00000618262 AIDAQ96BJ3 306 aa13.95□□□□□ -0.18
SRRT-216ENST00000618262 NSUN4Q96CB9 384 aaKnown RBP13.95□□□□□ -0.18
SRRT-216ENST00000618262 ESYT1Q9BSJ8 1104 aa13.95□□□□□ -0.18
SRRT-216ENST00000618262 JRKLQ9Y4A0 524 aa13.95□□□□□ -0.18
SRRT-216ENST00000618262 TAF6LQ9Y6J9 622 aa13.95□□□□□ -0.18
SRRT-216ENST00000618262 CEP350Q5VT06 3117 aa13.95□□□□□ -0.18
SRRT-216ENST00000618262 MAST3O60307 1309 aa13.95□□□□□ -0.18
SRRT-216ENST00000618262 TCP10Q12799 353 aa13.95□□□□□ -0.18
SRRT-216ENST00000618262 SOGA3Q5TF21 947 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms