RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 PPFIBP1Q86W92 1011 aa12.41□□□□□ -0.42
POLR2A-209ENST00000617998 ZBTB8OSQ8IWT0 167 aa12.41□□□□□ -0.42
POLR2A-209ENST00000617998 CPLX3Q8WVH0 158 aa12.41□□□□□ -0.42
POLR2A-209ENST00000617998 UPF1Q92900 1129 aaKnown RBP eCLIP12.41□□□□□ -0.42
POLR2A-209ENST00000617998 NUB1Q9Y5A7 615 aa12.41□□□□□ -0.42
POLR2A-209ENST00000617998 ARHGEF35A5YM69 484 aa12.41□□□□□ -0.42
POLR2A-209ENST00000617998 CACNA2D4Q7Z3S7 1137 aa12.41□□□□□ -0.42
POLR2A-209ENST00000617998 ELMOD1Q8N336 334 aa12.41□□□□□ -0.42
POLR2A-209ENST00000617998 MSANTD4Q8NCY6 345 aa12.41□□□□□ -0.42
POLR2A-209ENST00000617998 PYM1Q9BRP8 204 aaKnown RBP12.41□□□□□ -0.42
POLR2A-209ENST00000617998 FCER1AP12319 257 aa12.41□□□□□ -0.42
POLR2A-209ENST00000617998 C7orf31Q8N865 590 aa12.41□□□□□ -0.42
POLR2A-209ENST00000617998 KLHDC4Q8TBB5 520 aa12.41□□□□□ -0.42
POLR2A-209ENST00000617998 FBXO40Q9UH90 709 aa12.41□□□□□ -0.42
POLR2A-209ENST00000617998 SERPINC1P01008 464 aa12.41□□□□□ -0.42
POLR2A-209ENST00000617998 IGFBP4P22692 258 aa12.41□□□□□ -0.42
POLR2A-209ENST00000617998 NLRP10Q86W26 655 aa12.41□□□□□ -0.42
POLR2A-209ENST00000617998 UBE2Q2LH0YL09 131 aa12.41□□□□□ -0.42
POLR2A-209ENST00000617998 TNNI3KQ59H18 835 aa12.41□□□□□ -0.42
POLR2A-209ENST00000617998 TBC1D9Q6ZT07 1266 aa12.41□□□□□ -0.42
POLR2A-209ENST00000617998 HS2ST1Q7LGA3 356 aa12.41□□□□□ -0.42
POLR2A-209ENST00000617998 MMP19Q99542 508 aa12.41□□□□□ -0.42
POLR2A-209ENST00000617998 ALG1Q9BT22 464 aa12.41□□□□□ -0.42
POLR2A-209ENST00000617998 FPGT-TNNI3KV9GXZ4 949 aa12.41□□□□□ -0.42
POLR2A-209ENST00000617998 PNPLA6Q8IY17 1366 aa12.4□□□□□ -0.42
POLR2A-209ENST00000617998 TRIM27P14373 513 aa12.4□□□□□ -0.42
POLR2A-209ENST00000617998 CFAP58Q5T655 872 aa12.4□□□□□ -0.42
POLR2A-209ENST00000617998 ANKRD13AQ8IZ07 590 aa12.4□□□□□ -0.42
POLR2A-209ENST00000617998 IL17REQ8NFR9 667 aa12.4□□□□□ -0.42
POLR2A-209ENST00000617998 USP17L2Q6R6M4 530 aa12.4□□□□□ -0.42
POLR2A-209ENST00000617998 PRR36Q9H6K5 1346 aa12.4□□□□□ -0.42
POLR2A-209ENST00000617998 DDNO94850 711 aaPredicted RBP12.4□□□□□ -0.42
POLR2A-209ENST00000617998 FBXO11Q86XK2 927 aa12.4□□□□□ -0.42
POLR2A-209ENST00000617998 ARHGEF5Q12774 1597 aa12.4□□□□□ -0.42
POLR2A-209ENST00000617998 SOS2Q07890 1332 aaPredicted RBP12.4□□□□□ -0.42
POLR2A-209ENST00000617998 DNMT1P26358 1616 aaKnown RBP12.4□□□□□ -0.42
POLR2A-209ENST00000617998 CCDC83Q8IWF9 413 aa12.4□□□□□ -0.43
POLR2A-209ENST00000617998 LRRC47Q8N1G4 583 aaKnown RBP12.4□□□□□ -0.43
POLR2A-209ENST00000617998 ZNF397Q8NF99 534 aaPredicted RBP12.4□□□□□ -0.43
POLR2A-209ENST00000617998 APOL6Q9BWW8 343 aa12.4□□□□□ -0.43
POLR2A-209ENST00000617998 CARD14Q9BXL6 1004 aa12.4□□□□□ -0.43
POLR2A-209ENST00000617998 KCNG4Q8TDN1 519 aa12.39□□□□□ -0.43
POLR2A-209ENST00000617998 MACROD2A1Z1Q3 448 aa12.39□□□□□ -0.43
POLR2A-209ENST00000617998 BIRC3Q13489 604 aa12.39□□□□□ -0.43
POLR2A-209ENST00000617998 FOXP4Q8IVH2 680 aaPredicted RBP12.39□□□□□ -0.43
POLR2A-209ENST00000617998 SUCLG2Q96I99 432 aa12.39□□□□□ -0.43
POLR2A-209ENST00000617998 NUDT12Q9BQG2 462 aa12.39□□□□□ -0.43
POLR2A-209ENST00000617998 PCDHA1Q9Y5I3 950 aa12.39□□□□□ -0.43
POLR2A-209ENST00000617998 TSHZ3Q63HK5 1081 aa12.39□□□□□ -0.43
POLR2A-209ENST00000617998 SMIM5Q71RC9 77 aa12.39□□□□□ -0.43
POLR2A-209ENST00000617998 CLTCQ00610 1675 aaKnown RBP12.39□□□□□ -0.43
POLR2A-209ENST00000617998 DCDC2CA8MYV0 355 aa12.39□□□□□ -0.43
POLR2A-209ENST00000617998 CYP27B1O15528 508 aa12.39□□□□□ -0.43
POLR2A-209ENST00000617998 ADCY7P51828 1080 aa12.39□□□□□ -0.43
POLR2A-209ENST00000617998 ENOX2Q16206 610 aaKnown RBP12.39□□□□□ -0.43
POLR2A-209ENST00000617998 SESTD1Q86VW0 696 aa12.39□□□□□ -0.43
POLR2A-209ENST00000617998 COPB2P35606 906 aa12.39□□□□□ -0.43
POLR2A-209ENST00000617998 EXOC1Q9NV70 894 aa12.39□□□□□ -0.43
POLR2A-209ENST00000617998 AXIN2Q9Y2T1 843 aa12.39□□□□□ -0.43
POLR2A-209ENST00000617998 SPP2Q13103 211 aa12.38□□□□□ -0.43
POLR2A-209ENST00000617998 RUFY4Q6ZNE9 571 aa12.38□□□□□ -0.43
POLR2A-209ENST00000617998 ARHGAP45Q92619 1136 aa12.38□□□□□ -0.43
POLR2A-209ENST00000617998 KCNG1Q9UIX4 513 aa12.38□□□□□ -0.43
POLR2A-209ENST00000617998 CEP170BQ9Y4F5 1589 aaPredicted RBP12.38□□□□□ -0.43
POLR2A-209ENST00000617998 ARPP19P56211 112 aa12.38□□□□□ -0.43
POLR2A-209ENST00000617998 DEPTORQ8TB45 409 aa12.38□□□□□ -0.43
POLR2A-209ENST00000617998 LZTS2Q9BRK4 669 aa12.38□□□□□ -0.43
POLR2A-209ENST00000617998 ZNF532Q9HCE3 1301 aa12.38□□□□□ -0.43
POLR2A-209ENST00000617998 YAF2Q8IY57 180 aa12.38□□□□□ -0.43
POLR2A-209ENST00000617998 USP17L10C9JJH3 530 aa12.38□□□□□ -0.43
POLR2A-209ENST00000617998 RARBP10826 455 aa12.38□□□□□ -0.43
POLR2A-209ENST00000617998 NFX1Q12986 1120 aaKnown RBP12.38□□□□□ -0.43
POLR2A-209ENST00000617998 KLHL10Q6JEL2 608 aa12.38□□□□□ -0.43
POLR2A-209ENST00000617998 MAEAQ7L5Y9 396 aa12.38□□□□□ -0.43
POLR2A-209ENST00000617998 CRAMP1Q96RY5 1269 aa12.38□□□□□ -0.43
POLR2A-209ENST00000617998 KANSL2Q9H9L4 492 aa12.38□□□□□ -0.43
POLR2A-209ENST00000617998 USP17L12C9JPN9 530 aa12.38□□□□□ -0.43
POLR2A-209ENST00000617998 USP17L21D6R901 530 aa12.38□□□□□ -0.43
POLR2A-209ENST00000617998 ZAP70P43403 619 aa12.38□□□□□ -0.43
POLR2A-209ENST00000617998 APLP1P51693 650 aa12.38□□□□□ -0.43
POLR2A-209ENST00000617998 DBNDD2Q9BQY9 259 aa12.38□□□□□ -0.43
POLR2A-209ENST00000617998 TECPR2O15040 1411 aa12.38□□□□□ -0.43
POLR2A-209ENST00000617998 TMEM88BA6NKF7 163 aa12.38□□□□□ -0.43
POLR2A-209ENST00000617998 BMP15O95972 392 aa12.38□□□□□ -0.43
POLR2A-209ENST00000617998 DIP2BQ9P265 1576 aa12.38□□□□□ -0.43
POLR2A-209ENST00000617998 ATP7BP35670 1465 aa12.37□□□□□ -0.43
POLR2A-209ENST00000617998 DENND3A2RUS2 1198 aa12.37□□□□□ -0.43
POLR2A-209ENST00000617998 CACNB3P54284 484 aa12.37□□□□□ -0.43
POLR2A-209ENST00000617998 MIER3Q7Z3K6 550 aa12.37□□□□□ -0.43
POLR2A-209ENST00000617998 RNF180Q86T96 592 aa12.37□□□□□ -0.43
POLR2A-209ENST00000617998 MRPL50Q8N5N7 158 aaKnown RBP12.37□□□□□ -0.43
POLR2A-209ENST00000617998 EXOC4Q96A65 974 aa12.37□□□□□ -0.43
POLR2A-209ENST00000617998 SYT17Q9BSW7 474 aa12.37□□□□□ -0.43
POLR2A-209ENST00000617998 SERPINB13Q9UIV8 391 aa12.37□□□□□ -0.43
POLR2A-209ENST00000617998 PPFIA3O75145 1194 aa12.37□□□□□ -0.43
POLR2A-209ENST00000617998 SKOR2Q2VWA4 1001 aaPredicted RBP12.37□□□□□ -0.43
POLR2A-209ENST00000617998 GANCQ8TET4 914 aa12.37□□□□□ -0.43
POLR2A-209ENST00000617998 APPBP2Q92624 585 aa12.37□□□□□ -0.43
POLR2A-209ENST00000617998 PARP2Q9UGN5 583 aa12.37□□□□□ -0.43
POLR2A-209ENST00000617998 EXOC7Q9UPT5 735 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms