RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 CCT6AP40227 531 aaKnown RBP11.46□□□□□ -0.57
CUL4A-212ENST00000617546 ALS2CLQ60I27 953 aa11.46□□□□□ -0.57
CUL4A-212ENST00000617546 CCHCR1Q8TD31 782 aa11.46□□□□□ -0.57
CUL4A-212ENST00000617546 MAIP1Q8WWC4 291 aa11.46□□□□□ -0.57
CUL4A-212ENST00000617546 FAM204AQ9H8W3 233 aa11.46□□□□□ -0.57
CUL4A-212ENST00000617546 MAGEA1P43355 309 aa11.46□□□□□ -0.57
CUL4A-212ENST00000617546 AEBP2Q6ZN18 517 aaPredicted RBP11.46□□□□□ -0.57
CUL4A-212ENST00000617546 KBTBD3Q8NAB2 608 aa11.46□□□□□ -0.57
CUL4A-212ENST00000617546 KCNK9Q9NPC2 374 aa11.46□□□□□ -0.57
CUL4A-212ENST00000617546 ARHGEF10O15013 1369 aa11.46□□□□□ -0.57
CUL4A-212ENST00000617546 CPA1P15085 419 aa11.46□□□□□ -0.57
CUL4A-212ENST00000617546 RAB11FIP4Q86YS3 637 aa11.46□□□□□ -0.57
CUL4A-212ENST00000617546 SLC4A4Q9Y6R1 1079 aa11.46□□□□□ -0.57
CUL4A-212ENST00000617546 DENND4BO75064 1496 aaPredicted RBP11.46□□□□□ -0.57
CUL4A-212ENST00000617546 MAGI2Q86UL8 1455 aa11.46□□□□□ -0.57
CUL4A-212ENST00000617546 RNF40O75150 1001 aa11.46□□□□□ -0.58
CUL4A-212ENST00000617546 TRPM2O94759 1503 aa11.46□□□□□ -0.58
CUL4A-212ENST00000617546 PFKFB1P16118 471 aa11.46□□□□□ -0.58
CUL4A-212ENST00000617546 SV2BQ7L1I2 683 aa11.46□□□□□ -0.58
CUL4A-212ENST00000617546 UBL4BQ8N7F7 174 aa11.46□□□□□ -0.58
CUL4A-212ENST00000617546 VPS16Q9H269 839 aa11.46□□□□□ -0.58
CUL4A-212ENST00000617546 PHF8Q9UPP1 1060 aa11.46□□□□□ -0.58
CUL4A-212ENST00000617546 POLR2DO15514 142 aaKnown RBP11.46□□□□□ -0.58
CUL4A-212ENST00000617546 PPP6R2O75170 966 aa11.46□□□□□ -0.58
CUL4A-212ENST00000617546 KCNJ6P48051 423 aa11.46□□□□□ -0.58
CUL4A-212ENST00000617546 EPHB4P54760 987 aa11.46□□□□□ -0.58
CUL4A-212ENST00000617546 SPATA1Q5VX52 437 aa11.46□□□□□ -0.58
CUL4A-212ENST00000617546 PPP4R3AQ6IN85 833 aa11.46□□□□□ -0.58
CUL4A-212ENST00000617546 BPIFA3Q9BQP9 254 aa11.46□□□□□ -0.58
CUL4A-212ENST00000617546 TNNI3KQ59H18 835 aa11.45□□□□□ -0.58
CUL4A-212ENST00000617546 FBXO38Q6PIJ6 1188 aa11.45□□□□□ -0.58
CUL4A-212ENST00000617546 HOMER3Q9NSC5 361 aa11.45□□□□□ -0.58
CUL4A-212ENST00000617546 TRMT112Q9UI30 125 aaKnown RBP11.45□□□□□ -0.58
CUL4A-212ENST00000617546 FPGT-TNNI3KV9GXZ4 949 aa11.45□□□□□ -0.58
CUL4A-212ENST00000617546 TLDC2A0PJX2 215 aa11.45□□□□□ -0.58
CUL4A-212ENST00000617546 MYO1CO00159 1063 aa11.45□□□□□ -0.58
CUL4A-212ENST00000617546 HIP1RO75146 1068 aa11.45□□□□□ -0.58
CUL4A-212ENST00000617546 ATP5JP18859 108 aa11.45□□□□□ -0.58
CUL4A-212ENST00000617546 PPP1R7Q15435 360 aa11.45□□□□□ -0.58
CUL4A-212ENST00000617546 ASIC2Q16515 512 aa11.45□□□□□ -0.58
CUL4A-212ENST00000617546 SLC9C2Q5TAH2 1124 aa11.45□□□□□ -0.58
CUL4A-212ENST00000617546 TMOD3Q9NYL9 352 aa11.45□□□□□ -0.58
CUL4A-212ENST00000617546 TRIM37O94972 964 aa11.45□□□□□ -0.58
CUL4A-212ENST00000617546 GNA14O95837 355 aa11.45□□□□□ -0.58
CUL4A-212ENST00000617546 DNM2P50570 870 aa11.45□□□□□ -0.58
CUL4A-212ENST00000617546 CCDC65Q8IXS2 484 aa11.45□□□□□ -0.58
CUL4A-212ENST00000617546 LSG1Q9H089 658 aaKnown RBP11.45□□□□□ -0.58
CUL4A-212ENST00000617546 PTCH1Q13635 1447 aa11.45□□□□□ -0.58
CUL4A-212ENST00000617546 NUTM2BA6NNL0 878 aaPredicted RBP11.45□□□□□ -0.58
CUL4A-212ENST00000617546 NUTM2EB1AL46 878 aaPredicted RBP11.45□□□□□ -0.58
CUL4A-212ENST00000617546 LIG3P49916 1009 aa11.45□□□□□ -0.58
CUL4A-212ENST00000617546 ZKSCAN8Q15776 578 aaPredicted RBP11.45□□□□□ -0.58
CUL4A-212ENST00000617546 CSGALNACT2Q8N6G5 542 aa11.45□□□□□ -0.58
CUL4A-212ENST00000617546 XAGE3Q8WTP9 111 aa11.45□□□□□ -0.58
CUL4A-212ENST00000617546 APPBP2Q92624 585 aa11.45□□□□□ -0.58
CUL4A-212ENST00000617546 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.45□□□□□ -0.58
CUL4A-212ENST00000617546 H7C1D1 291 aa11.44□□□□□ -0.58
CUL4A-212ENST00000617546 SNRKQ9NRH2 765 aa11.44□□□□□ -0.58
CUL4A-212ENST00000617546 RCOR1Q9UKL0 485 aa11.44□□□□□ -0.58
CUL4A-212ENST00000617546 PA2G4Q9UQ80 394 aaKnown RBP11.44□□□□□ -0.58
CUL4A-212ENST00000617546 TFCP2Q12800 502 aa11.44□□□□□ -0.58
CUL4A-212ENST00000617546 RPS6KA1Q15418 735 aa11.44□□□□□ -0.58
CUL4A-212ENST00000617546 LMBR1LQ6UX01 489 aa11.44□□□□□ -0.58
CUL4A-212ENST00000617546 SYCP3Q8IZU3 236 aa11.44□□□□□ -0.58
CUL4A-212ENST00000617546 RETREG2Q8NC44 543 aa11.44□□□□□ -0.58
CUL4A-212ENST00000617546 RUNDC3BQ96NL0 473 aa11.44□□□□□ -0.58
CUL4A-212ENST00000617546 SLF1Q9BQI6 1058 aa11.44□□□□□ -0.58
CUL4A-212ENST00000617546 POLR3EQ9NVU0 708 aa11.44□□□□□ -0.58
CUL4A-212ENST00000617546 BAIAP2L1Q9UHR4 511 aa11.44□□□□□ -0.58
CUL4A-212ENST00000617546 MAP7Q14244 749 aa11.44□□□□□ -0.58
CUL4A-212ENST00000617546 PNMA8AQ86V59 439 aaPredicted RBP11.44□□□□□ -0.58
CUL4A-212ENST00000617546 VSIG1Q86XK7 387 aa11.44□□□□□ -0.58
CUL4A-212ENST00000617546 PANX2Q96RD6 677 aa11.44□□□□□ -0.58
CUL4A-212ENST00000617546 ANAPC4Q9UJX5 808 aa11.44□□□□□ -0.58
CUL4A-212ENST00000617546 CCDC160A6NGH7 325 aa11.44□□□□□ -0.58
CUL4A-212ENST00000617546 KRT40Q6A162 431 aa11.44□□□□□ -0.58
CUL4A-212ENST00000617546 PHLDB3Q6NSJ2 640 aa11.44□□□□□ -0.58
CUL4A-212ENST00000617546 FAM173BQ6P4H8 233 aa11.44□□□□□ -0.58
CUL4A-212ENST00000617546 ANKRD7Q92527 254 aa11.44□□□□□ -0.58
CUL4A-212ENST00000617546 DDX21Q9NR30 783 aaKnown RBP eCLIP11.44□□□□□ -0.58
CUL4A-212ENST00000617546 PROSER2Q86WR7 435 aaPredicted RBP11.44□□□□□ -0.58
CUL4A-212ENST00000617546 RNF168Q8IYW5 571 aaPredicted RBP11.44□□□□□ -0.58
CUL4A-212ENST00000617546 CABP5Q9NP86 173 aa11.44□□□□□ -0.58
CUL4A-212ENST00000617546 BCAP29Q9UHQ4 241 aa11.44□□□□□ -0.58
CUL4A-212ENST00000617546 MPHOSPH10O00566 681 aaKnown RBP11.43□□□□□ -0.58
CUL4A-212ENST00000617546 EVI5O60447 810 aa11.43□□□□□ -0.58
CUL4A-212ENST00000617546 RUBCNQ92622 972 aa11.43□□□□□ -0.58
CUL4A-212ENST00000617546 TBC1D31Q96DN5 1066 aa11.43□□□□□ -0.58
CUL4A-212ENST00000617546 IFIH1Q9BYX4 1025 aaKnown RBP11.43□□□□□ -0.58
CUL4A-212ENST00000617546 CNOT10Q9H9A5 744 aaKnown RBP11.43□□□□□ -0.58
CUL4A-212ENST00000617546 RIPOR2Q9Y4F9 1068 aa11.43□□□□□ -0.58
CUL4A-212ENST00000617546 DENND2CQ68D51 928 aa11.43□□□□□ -0.58
CUL4A-212ENST00000617546 TADA2BQ86TJ2 420 aa11.43□□□□□ -0.58
CUL4A-212ENST00000617546 PLA2G4DQ86XP0 818 aa11.43□□□□□ -0.58
CUL4A-212ENST00000617546 NELFBQ8WX92 580 aa11.43□□□□□ -0.58
CUL4A-212ENST00000617546 SBNO1A3KN83 1393 aa11.43□□□□□ -0.58
CUL4A-212ENST00000617546 FLOT1O75955 427 aa11.43□□□□□ -0.58
CUL4A-212ENST00000617546 CCDC62Q6P9F0 684 aa11.43□□□□□ -0.58
CUL4A-212ENST00000617546 DIS3L2Q8IYB7 885 aaKnown RBP11.43□□□□□ -0.58
CUL4A-212ENST00000617546 PARD6BQ9BYG5 372 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms