RNA–Protein interactions for RNA: ENST00000617474.1

PTPRT-210, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5

Gene PTPRT, Length 4,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-210ENST00000617474 DMTNQ08495 405 aa17.35■□□□□ 0.37
PTPRT-210ENST00000617474 SND1Q7KZF4 910 aaKnown RBP eCLIP17.35■□□□□ 0.37
PTPRT-210ENST00000617474 PDLIM2Q96JY6 352 aa17.35■□□□□ 0.37
PTPRT-210ENST00000617474 LRRC27Q9C0I9 530 aa17.35■□□□□ 0.37
PTPRT-210ENST00000617474 GOLGA6AQ9NYA3 693 aa17.35■□□□□ 0.37
PTPRT-210ENST00000617474 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.35■□□□□ 0.37
PTPRT-210ENST00000617474 MYOM2P54296 1465 aa17.35■□□□□ 0.37
PTPRT-210ENST00000617474 LTKP29376 864 aa17.35■□□□□ 0.37
PTPRT-210ENST00000617474 PPP1R13BQ96KQ4 1090 aa17.35■□□□□ 0.37
PTPRT-210ENST00000617474 CCDC114Q96M63 670 aa17.35■□□□□ 0.37
PTPRT-210ENST00000617474 PUS3Q9BZE2 481 aaKnown RBP17.35■□□□□ 0.37
PTPRT-210ENST00000617474 C8orf74Q6P047 294 aa17.35■□□□□ 0.37
PTPRT-210ENST00000617474 ARHGEF5Q12774 1597 aa17.34■□□□□ 0.37
PTPRT-210ENST00000617474 ADCY9O60503 1353 aa17.34■□□□□ 0.37
PTPRT-210ENST00000617474 CCDC121Q6ZUS5 278 aa17.34■□□□□ 0.37
PTPRT-210ENST00000617474 CCDC25Q86WR0 208 aa17.34■□□□□ 0.37
PTPRT-210ENST00000617474 GPR161Q8N6U8 529 aaKnown RBP17.34■□□□□ 0.37
PTPRT-210ENST00000617474 GPHNQ9NQX3 736 aaPredicted RBP17.34■□□□□ 0.37
PTPRT-210ENST00000617474 GJB4Q9NTQ9 266 aa17.34■□□□□ 0.37
PTPRT-210ENST00000617474 CTNNA2P26232 953 aa17.34■□□□□ 0.37
PTPRT-210ENST00000617474 TXKP42681 527 aa17.34■□□□□ 0.37
PTPRT-210ENST00000617474 TNIP1Q15025 636 aa17.34■□□□□ 0.37
PTPRT-210ENST00000617474 PUM3Q15397 648 aaKnown RBP17.34■□□□□ 0.37
PTPRT-210ENST00000617474 SLFNL1Q499Z3 407 aa17.34■□□□□ 0.37
PTPRT-210ENST00000617474 DCAF17Q5H9S7 520 aaPredicted RBP17.34■□□□□ 0.37
PTPRT-210ENST00000617474 ZRSR2Q15696 482 aaKnown RBP17.33■□□□□ 0.37
PTPRT-210ENST00000617474 NOSTRINQ8IVI9 506 aa17.33■□□□□ 0.37
PTPRT-210ENST00000617474 CCDC155Q8N6L0 562 aa17.33■□□□□ 0.37
PTPRT-210ENST00000617474 SCLT1Q96NL6 688 aa17.33■□□□□ 0.37
PTPRT-210ENST00000617474 SAMD9LQ8IVG5 1584 aa17.33■□□□□ 0.37
PTPRT-210ENST00000617474 DYMQ7RTS9 669 aa17.33■□□□□ 0.37
PTPRT-210ENST00000617474 SLF2Q8IX21 1173 aa17.33■□□□□ 0.37
PTPRT-210ENST00000617474 NELFBQ8WX92 580 aa17.33■□□□□ 0.37
PTPRT-210ENST00000617474 FAM207AQ9NSI2 230 aaPredicted RBP17.33■□□□□ 0.37
PTPRT-210ENST00000617474 NECTIN1Q15223 517 aa17.33■□□□□ 0.36
PTPRT-210ENST00000617474 CCDC24Q8N4L8 307 aa17.33■□□□□ 0.36
PTPRT-210ENST00000617474 UBLCP1Q8WVY7 318 aaPredicted RBP17.33■□□□□ 0.36
PTPRT-210ENST00000617474 TRIM31Q9BZY9 425 aa17.33■□□□□ 0.36
PTPRT-210ENST00000617474 SAP30BPQ9UHR5 308 aaKnown RBP17.33■□□□□ 0.36
PTPRT-210ENST00000617474 KDRP35968 1356 aa17.33■□□□□ 0.36
PTPRT-210ENST00000617474 EZRP15311 586 aaKnown RBP17.33■□□□□ 0.36
PTPRT-210ENST00000617474 RAD51AP2Q09MP3 1159 aa17.33■□□□□ 0.36
PTPRT-210ENST00000617474 GOLGA6BA6NDN3 693 aa17.32■□□□□ 0.36
PTPRT-210ENST00000617474 SASH1O94885 1247 aa17.32■□□□□ 0.36
PTPRT-210ENST00000617474 ATP1A3P13637 1013 aa17.32■□□□□ 0.36
PTPRT-210ENST00000617474 MAGEA1P43355 309 aa17.32■□□□□ 0.36
PTPRT-210ENST00000617474 INCENPQ9NQS7 918 aa17.32■□□□□ 0.36
PTPRT-210ENST00000617474 METP08581 1390 aa17.32■□□□□ 0.36
PTPRT-210ENST00000617474 TTC37Q6PGP7 1564 aa17.32■□□□□ 0.36
PTPRT-210ENST00000617474 GJC1P36383 396 aa17.32■□□□□ 0.36
PTPRT-210ENST00000617474 EIF6P56537 245 aaKnown RBP17.32■□□□□ 0.36
PTPRT-210ENST00000617474 HOOK3Q86VS8 718 aa17.32■□□□□ 0.36
PTPRT-210ENST00000617474 RRP36Q96EU6 259 aaKnown RBP17.32■□□□□ 0.36
PTPRT-210ENST00000617474 SETDB2Q96T68 719 aa17.32■□□□□ 0.36
PTPRT-210ENST00000617474 WWC3Q9ULE0 1092 aa17.32■□□□□ 0.36
PTPRT-210ENST00000617474 ADORA1P30542 326 aa17.32■□□□□ 0.36
PTPRT-210ENST00000617474 PLS1Q14651 629 aa17.32■□□□□ 0.36
PTPRT-210ENST00000617474 AKNAD1Q5T1N1 836 aa17.32■□□□□ 0.36
PTPRT-210ENST00000617474 AIFM3Q96NN9 605 aa17.32■□□□□ 0.36
PTPRT-210ENST00000617474 SH3TC1Q8TE82 1336 aa17.31■□□□□ 0.36
PTPRT-210ENST00000617474 HGSO14964 777 aaPredicted RBP17.31■□□□□ 0.36
PTPRT-210ENST00000617474 GNA11P29992 359 aa17.31■□□□□ 0.36
PTPRT-210ENST00000617474 RBM6P78332 1123 aaKnown RBP17.31■□□□□ 0.36
PTPRT-210ENST00000617474 PI16Q6UXB8 463 aa17.31■□□□□ 0.36
PTPRT-210ENST00000617474 ZNF654Q8IZM8 581 aa17.31■□□□□ 0.36
PTPRT-210ENST00000617474 CNKSR2Q8WXI2 1034 aa17.31■□□□□ 0.36
PTPRT-210ENST00000617474 RCOR1Q9UKL0 485 aa17.31■□□□□ 0.36
PTPRT-210ENST00000617474 PTCH1Q13635 1447 aa17.31■□□□□ 0.36
PTPRT-210ENST00000617474 EFCAB8A8MWE9 144 aa17.31■□□□□ 0.36
PTPRT-210ENST00000617474 NF2P35240 595 aa17.31■□□□□ 0.36
PTPRT-210ENST00000617474 GRAMD1CQ8IYS0 662 aa17.31■□□□□ 0.36
PTPRT-210ENST00000617474 SECISBP2LQ93073 1101 aaKnown RBP17.31■□□□□ 0.36
PTPRT-210ENST00000617474 AATFQ9NY61 560 aaKnown RBP eCLIP17.31■□□□□ 0.36
PTPRT-210ENST00000617474 FAM47AQ5JRC9 791 aa17.31■□□□□ 0.36
PTPRT-210ENST00000617474 ERMNQ8TAM6 284 aa17.31■□□□□ 0.36
PTPRT-210ENST00000617474 NLRC4Q9NPP4 1024 aa17.31■□□□□ 0.36
PTPRT-210ENST00000617474 COPRSQ9NQ92 184 aa17.31■□□□□ 0.36
PTPRT-210ENST00000617474 SV2BQ7L1I2 683 aa17.31■□□□□ 0.36
PTPRT-210ENST00000617474 KLHL7Q8IXQ5 586 aa17.31■□□□□ 0.36
PTPRT-210ENST00000617474 RBM28Q9NW13 759 aaKnown RBP17.31■□□□□ 0.36
PTPRT-210ENST00000617474 RTEL1Q9NZ71 1219 aa17.31■□□□□ 0.36
PTPRT-210ENST00000617474 FBXO38Q6PIJ6 1188 aa17.3■□□□□ 0.36
PTPRT-210ENST00000617474 SMYD4Q8IYR2 804 aaPredicted RBP17.3■□□□□ 0.36
PTPRT-210ENST00000617474 ARFGAP2Q8N6H7 521 aa17.3■□□□□ 0.36
PTPRT-210ENST00000617474 TBC1D5Q92609 795 aa17.3■□□□□ 0.36
PTPRT-210ENST00000617474 C19orf44Q9H6X5 657 aa17.3■□□□□ 0.36
PTPRT-210ENST00000617474 HLA-DOAP06340 250 aa17.3■□□□□ 0.36
PTPRT-210ENST00000617474 TNNC1P63316 161 aa17.3■□□□□ 0.36
PTPRT-210ENST00000617474 PTPROQ16827 1216 aa17.3■□□□□ 0.36
PTPRT-210ENST00000617474 SPATA5Q8NB90 893 aa17.3■□□□□ 0.36
PTPRT-210ENST00000617474 SDR42E1Q8WUS8 393 aa17.3■□□□□ 0.36
PTPRT-210ENST00000617474 TBC1D7Q9P0N9 293 aa17.3■□□□□ 0.36
PTPRT-210ENST00000617474 PRR36Q9H6K5 1346 aa17.3■□□□□ 0.36
PTPRT-210ENST00000617474 A0A1W2PRG0 241 aa17.3■□□□□ 0.36
PTPRT-210ENST00000617474 CCNT1O60563 726 aaKnown RBP17.3■□□□□ 0.36
PTPRT-210ENST00000617474 PDE11AQ9HCR9 933 aa17.3■□□□□ 0.36
PTPRT-210ENST00000617474 PSDA5PKW4 1024 aaPredicted RBP17.29■□□□□ 0.36
PTPRT-210ENST00000617474 TRIM14Q14142 442 aa17.29■□□□□ 0.36
PTPRT-210ENST00000617474 GRIPAP1Q4V328 841 aa17.29■□□□□ 0.36
PTPRT-210ENST00000617474 TYW1BQ6NUM6 668 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms