RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 GUCY1A2P33402 732 aa9.12□□□□□ -0.95
NEK3-207ENST00000617054 EVCP57679 992 aa9.12□□□□□ -0.95
NEK3-207ENST00000617054 PICALMQ13492 652 aa9.12□□□□□ -0.95
NEK3-207ENST00000617054 WTAPQ15007 396 aa9.12□□□□□ -0.95
NEK3-207ENST00000617054 SPTY2D1Q68D10 685 aaPredicted RBP9.12□□□□□ -0.95
NEK3-207ENST00000617054 TTC6Q86TZ1 520 aa9.12□□□□□ -0.95
NEK3-207ENST00000617054 PIBF1Q8WXW3 757 aa9.12□□□□□ -0.95
NEK3-207ENST00000617054 UBAC1Q9BSL1 405 aa9.12□□□□□ -0.95
NEK3-207ENST00000617054 KRT23Q9C075 422 aa9.12□□□□□ -0.95
NEK3-207ENST00000617054 TNS1Q9HBL0 1735 aaKnown RBP9.12□□□□□ -0.95
NEK3-207ENST00000617054 TNKSO95271 1327 aa9.11□□□□□ -0.95
NEK3-207ENST00000617054 SALL1Q9NSC2 1324 aa9.11□□□□□ -0.95
NEK3-207ENST00000617054 GOLGA8AA7E2F4 631 aa9.11□□□□□ -0.95
NEK3-207ENST00000617054 CNNM2Q9H8M5 875 aa9.11□□□□□ -0.95
NEK3-207ENST00000617054 XRCC6P12956 609 aaKnown RBP eCLIP9.11□□□□□ -0.95
NEK3-207ENST00000617054 ENAHQ8N8S7 591 aaPredicted RBP9.11□□□□□ -0.95
NEK3-207ENST00000617054 RTFDC1Q9BY42 306 aaPredicted RBP9.11□□□□□ -0.95
NEK3-207ENST00000617054 ERICH2A1L162 156 aa9.11□□□□□ -0.95
NEK3-207ENST00000617054 RESTQ13127 1097 aa9.11□□□□□ -0.95
NEK3-207ENST00000617054 AOC3Q16853 763 aa9.11□□□□□ -0.95
NEK3-207ENST00000617054 FBXL16Q8N461 479 aa9.11□□□□□ -0.95
NEK3-207ENST00000617054 ESR2Q92731 530 aa9.11□□□□□ -0.95
NEK3-207ENST00000617054 TMEM87BQ96K49 555 aa9.11□□□□□ -0.95
NEK3-207ENST00000617054 LLPHQ9BRT6 129 aaKnown RBP9.11□□□□□ -0.95
NEK3-207ENST00000617054 SLC26A6Q9BXS9 759 aa9.11□□□□□ -0.95
NEK3-207ENST00000617054 TMX4Q9H1E5 349 aaPredicted RBP9.11□□□□□ -0.95
NEK3-207ENST00000617054 ZMYM6O95789 1325 aa9.1□□□□□ -0.95
NEK3-207ENST00000617054 BAG6P46379 1132 aa9.1□□□□□ -0.95
NEK3-207ENST00000617054 CACNB3P54284 484 aa9.1□□□□□ -0.95
NEK3-207ENST00000617054 ILDR1Q86SU0 546 aaPredicted RBP9.1□□□□□ -0.95
NEK3-207ENST00000617054 KIAA0825Q8IV33 1275 aa9.1□□□□□ -0.95
NEK3-207ENST00000617054 TTF2Q9UNY4 1162 aaKnown RBP9.1□□□□□ -0.95
NEK3-207ENST00000617054 ATP6V1DQ9Y5K8 247 aa9.1□□□□□ -0.95
NEK3-207ENST00000617054 USP17L3A6NCW0 530 aa9.1□□□□□ -0.95
NEK3-207ENST00000617054 USP17L4A6NCW7 530 aa9.1□□□□□ -0.95
NEK3-207ENST00000617054 HMGN5P82970 282 aaKnown RBP9.1□□□□□ -0.95
NEK3-207ENST00000617054 NTRK3Q16288 839 aa9.1□□□□□ -0.95
NEK3-207ENST00000617054 C15orf52Q6ZUT6 534 aaKnown RBP9.1□□□□□ -0.95
NEK3-207ENST00000617054 USP17L1Q7RTZ2 530 aa9.1□□□□□ -0.95
NEK3-207ENST00000617054 C8orf76Q96K31 380 aa9.1□□□□□ -0.95
NEK3-207ENST00000617054 ZSCAN10Q96SZ4 725 aaPredicted RBP9.1□□□□□ -0.95
NEK3-207ENST00000617054 RNF41Q9H4P4 317 aaPredicted RBP9.1□□□□□ -0.95
NEK3-207ENST00000617054 SLX4Q8IY92 1834 aa9.1□□□□□ -0.95
NEK3-207ENST00000617054 COL11A2P13942 1736 aaPredicted RBP9.1□□□□□ -0.95
NEK3-207ENST00000617054 MROH7-TTC4A0A0A0MT08 1334 aa9.1□□□□□ -0.95
NEK3-207ENST00000617054 PDS5AQ29RF7 1337 aaKnown RBP9.1□□□□□ -0.95
NEK3-207ENST00000617054 TSPY2A6NKD2 308 aa9.09□□□□□ -0.95
NEK3-207ENST00000617054 KIF28PB7ZC32 967 aa9.09□□□□□ -0.95
NEK3-207ENST00000617054 CAPN15O75808 1086 aa9.09□□□□□ -0.95
NEK3-207ENST00000617054 BAG3O95817 575 aa9.09□□□□□ -0.95
NEK3-207ENST00000617054 RASGRP2Q7LDG7 609 aa9.09□□□□□ -0.95
NEK3-207ENST00000617054 TEX11Q8IYF3 940 aa9.09□□□□□ -0.95
NEK3-207ENST00000617054 SPATA32Q96LK8 384 aa9.09□□□□□ -0.95
NEK3-207ENST00000617054 ATP8A2Q9NTI2 1148 aa9.09□□□□□ -0.95
NEK3-207ENST00000617054 MKRN1Q9UHC7 482 aaKnown RBP9.09□□□□□ -0.95
NEK3-207ENST00000617054 ANAPC4Q9UJX5 808 aa9.09□□□□□ -0.95
NEK3-207ENST00000617054 LIFRP42702 1097 aa9.09□□□□□ -0.95
NEK3-207ENST00000617054 KRT85P78386 507 aa9.09□□□□□ -0.95
NEK3-207ENST00000617054 SART3Q15020 963 aaKnown RBP9.09□□□□□ -0.95
NEK3-207ENST00000617054 CAMK4Q16566 473 aa9.09□□□□□ -0.95
NEK3-207ENST00000617054 IFIT1BQ5T764 474 aaKnown RBP9.09□□□□□ -0.95
NEK3-207ENST00000617054 SYNE3Q6ZMZ3 975 aa9.09□□□□□ -0.95
NEK3-207ENST00000617054 SGMS1Q86VZ5 419 aa9.09□□□□□ -0.95
NEK3-207ENST00000617054 ZNF654Q8IZM8 581 aa9.09□□□□□ -0.95
NEK3-207ENST00000617054 NOL10Q9BSC4 688 aaKnown RBP9.09□□□□□ -0.95
NEK3-207ENST00000617054 ALG1Q9BT22 464 aa9.09□□□□□ -0.95
NEK3-207ENST00000617054 CCDC88AQ3V6T2 1871 aa9.09□□□□□ -0.95
NEK3-207ENST00000617054 DHX16O60231 1041 aaKnown RBP9.09□□□□□ -0.95
NEK3-207ENST00000617054 IARSP41252 1262 aaKnown RBP9.09□□□□□ -0.95
NEK3-207ENST00000617054 TFAP4Q01664 338 aa9.09□□□□□ -0.95
NEK3-207ENST00000617054 SEC23AQ15436 765 aa9.09□□□□□ -0.95
NEK3-207ENST00000617054 USP28Q96RU2 1077 aa9.09□□□□□ -0.95
NEK3-207ENST00000617054 COA1Q9GZY4 146 aa9.09□□□□□ -0.95
NEK3-207ENST00000617054 MKNK2Q9HBH9 465 aa9.09□□□□□ -0.95
NEK3-207ENST00000617054 KCNJ14Q9UNX9 436 aa9.09□□□□□ -0.95
NEK3-207ENST00000617054 DAGLAQ9Y4D2 1042 aa9.09□□□□□ -0.95
NEK3-207ENST00000617054 FSD2A1L4K1 749 aa9.08□□□□□ -0.96
NEK3-207ENST00000617054 CARNS1A5YM72 827 aa9.08□□□□□ -0.96
NEK3-207ENST00000617054 LIG1P18858 919 aa9.08□□□□□ -0.96
NEK3-207ENST00000617054 PTMSP20962 102 aa9.08□□□□□ -0.96
NEK3-207ENST00000617054 RBM5P52756 815 aaKnown RBP eCLIP9.08□□□□□ -0.96
NEK3-207ENST00000617054 RHBDL3P58872 404 aa9.08□□□□□ -0.96
NEK3-207ENST00000617054 C12orf60Q5U649 245 aa9.08□□□□□ -0.96
NEK3-207ENST00000617054 RNF214Q8ND24 703 aa9.08□□□□□ -0.96
NEK3-207ENST00000617054 LEO1Q8WVC0 666 aaPredicted RBP9.08□□□□□ -0.96
NEK3-207ENST00000617054 WDR19Q8NEZ3 1342 aa9.08□□□□□ -0.96
NEK3-207ENST00000617054 PLEKHA8P1O95397 391 aa9.08□□□□□ -0.96
NEK3-207ENST00000617054 VEGFAP15692 232 aaPredicted RBP9.08□□□□□ -0.96
NEK3-207ENST00000617054 GSTO1P78417 241 aa9.08□□□□□ -0.96
NEK3-207ENST00000617054 RTN1Q16799 776 aa9.08□□□□□ -0.96
NEK3-207ENST00000617054 FANCBQ8NB91 859 aa9.08□□□□□ -0.96
NEK3-207ENST00000617054 FBXO18Q8NFZ0 1043 aa9.08□□□□□ -0.96
NEK3-207ENST00000617054 PGBD1Q96JS3 809 aa9.08□□□□□ -0.96
NEK3-207ENST00000617054 GRPEL1Q9HAV7 217 aa9.08□□□□□ -0.96
NEK3-207ENST00000617054 IL17RBQ9NRM6 502 aa9.08□□□□□ -0.96
NEK3-207ENST00000617054 DUOX1Q9NRD9 1551 aa9.08□□□□□ -0.96
NEK3-207ENST00000617054 GPR75-ASB3A0A0A6YYF3 556 aa9.07□□□□□ -0.96
NEK3-207ENST00000617054 UBE2HP62256 183 aa9.07□□□□□ -0.96
NEK3-207ENST00000617054 TCP10Q12799 353 aa9.07□□□□□ -0.96
NEK3-207ENST00000617054 IQCA1Q86XH1 822 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms