RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 TMEM151BQ8IW70 566 aa5.02□□□□□ -1.61
HMGB1P24-202ENST00000615653 TTC16Q8NEE8 873 aa5.02□□□□□ -1.61
HMGB1P24-202ENST00000615653 MCOLN1Q9GZU1 580 aa5.02□□□□□ -1.61
HMGB1P24-202ENST00000615653 CNOT6Q9ULM6 557 aaKnown RBP5.02□□□□□ -1.61
HMGB1P24-202ENST00000615653 SEMA7AO75326 666 aa5.01□□□□□ -1.61
HMGB1P24-202ENST00000615653 TNFRSF21O75509 655 aa5.01□□□□□ -1.61
HMGB1P24-202ENST00000615653 DNM1Q05193 864 aaKnown RBP5.01□□□□□ -1.61
HMGB1P24-202ENST00000615653 AP3B2Q13367 1082 aa5.01□□□□□ -1.61
HMGB1P24-202ENST00000615653 SF3B2Q13435 895 aaKnown RBP5.01□□□□□ -1.61
HMGB1P24-202ENST00000615653 KIF4BQ2VIQ3 1234 aa5.01□□□□□ -1.61
HMGB1P24-202ENST00000615653 ALKBH2Q6NS38 261 aa5.01□□□□□ -1.61
HMGB1P24-202ENST00000615653 ATP13A1Q9HD20 1204 aa5.01□□□□□ -1.61
HMGB1P24-202ENST00000615653 SEPT3Q9UH03 358 aa5.01□□□□□ -1.61
HMGB1P24-202ENST00000615653 GNAT3A8MTJ3 354 aa5□□□□□ -1.61
HMGB1P24-202ENST00000615653 ZNF862O60290 1169 aa5□□□□□ -1.61
HMGB1P24-202ENST00000615653 NEFMP07197 916 aa5□□□□□ -1.61
HMGB1P24-202ENST00000615653 SNX29Q8TEQ0 813 aa5□□□□□ -1.61
HMGB1P24-202ENST00000615653 ISL2Q96A47 359 aa5□□□□□ -1.61
HMGB1P24-202ENST00000615653 ALPK1Q96QP1 1244 aa5□□□□□ -1.61
HMGB1P24-202ENST00000615653 TCF12Q99081 682 aa5□□□□□ -1.61
HMGB1P24-202ENST00000615653 CCDC86Q9H6F5 360 aaKnown RBP5□□□□□ -1.61
HMGB1P24-202ENST00000615653 TIMELESSQ9UNS1 1208 aa5□□□□□ -1.61
HMGB1P24-202ENST00000615653 AMOTL2Q9Y2J4 779 aa5□□□□□ -1.61
HMGB1P24-202ENST00000615653 PEX10O60683 326 aa4.99□□□□□ -1.61
HMGB1P24-202ENST00000615653 NPR3P17342 541 aa4.99□□□□□ -1.61
HMGB1P24-202ENST00000615653 MZF1P28698 734 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P24-202ENST00000615653 NOM1Q5C9Z4 860 aaKnown RBP4.99□□□□□ -1.61
HMGB1P24-202ENST00000615653 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.99□□□□□ -1.61
HMGB1P24-202ENST00000615653 GTF3C2Q8WUA4 911 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P24-202ENST00000615653 EGFL7Q9UHF1 273 aa4.99□□□□□ -1.61
HMGB1P24-202ENST00000615653 KCTD3Q9Y597 815 aa4.99□□□□□ -1.61
HMGB1P24-202ENST00000615653 MYOCOSA0A1B0GUC4 107 aa4.98□□□□□ -1.61
HMGB1P24-202ENST00000615653 FAM13AO94988 1023 aa4.98□□□□□ -1.61
HMGB1P24-202ENST00000615653 TTC6Q86TZ1 520 aa4.98□□□□□ -1.61
HMGB1P24-202ENST00000615653 MYLIPQ8WY64 445 aa4.98□□□□□ -1.61
HMGB1P24-202ENST00000615653 HSPA12BQ96MM6 686 aa4.98□□□□□ -1.61
HMGB1P24-202ENST00000615653 PRDM10Q9NQV6 1147 aa4.98□□□□□ -1.61
HMGB1P24-202ENST00000615653 FOXD3Q9UJU5 478 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P24-202ENST00000615653 SUPT5HO00267 1087 aaKnown RBP4.97□□□□□ -1.61
HMGB1P24-202ENST00000615653 RFXAPO00287 272 aa4.97□□□□□ -1.61
HMGB1P24-202ENST00000615653 MPSTP25325 297 aa4.97□□□□□ -1.61
HMGB1P24-202ENST00000615653 USP5P45974 858 aa4.97□□□□□ -1.61
HMGB1P24-202ENST00000615653 EIF1AXP47813 144 aaKnown RBP4.97□□□□□ -1.61
HMGB1P24-202ENST00000615653 TEPSINQ96N21 525 aa4.97□□□□□ -1.61
HMGB1P24-202ENST00000615653 ZNF576Q9H609 170 aa4.97□□□□□ -1.61
HMGB1P24-202ENST00000615653 GCM1Q9NP62 436 aa4.97□□□□□ -1.61
HMGB1P24-202ENST00000615653 KRT82Q9NSB4 513 aa4.97□□□□□ -1.61
HMGB1P24-202ENST00000615653 A0A1W2PP55 124 aa4.96□□□□□ -1.62
HMGB1P24-202ENST00000615653 EOMESO95936 686 aa4.96□□□□□ -1.62
HMGB1P24-202ENST00000615653 HPXP02790 462 aa4.96□□□□□ -1.62
HMGB1P24-202ENST00000615653 ERVFC1P60507 584 aa4.96□□□□□ -1.62
HMGB1P24-202ENST00000615653 EHHADHQ08426 723 aa4.96□□□□□ -1.62
HMGB1P24-202ENST00000615653 PHLDB3Q6NSJ2 640 aa4.96□□□□□ -1.62
HMGB1P24-202ENST00000615653 IRF2BP1Q8IU81 584 aa4.96□□□□□ -1.62
HMGB1P24-202ENST00000615653 FEZF2Q8TBJ5 459 aa4.96□□□□□ -1.62
HMGB1P24-202ENST00000615653 ARID3AQ99856 593 aa4.96□□□□□ -1.62
HMGB1P24-202ENST00000615653 FOXQ1Q9C009 403 aa4.96□□□□□ -1.62
HMGB1P24-202ENST00000615653 LIN7BQ9HAP6 207 aa4.96□□□□□ -1.62
HMGB1P24-202ENST00000615653 SSU72Q9NP77 194 aaKnown RBP4.96□□□□□ -1.62
HMGB1P24-202ENST00000615653 TEX51A0A1B0GUA7 166 aa4.95□□□□□ -1.62
HMGB1P24-202ENST00000615653 ITPKAP23677 461 aa4.95□□□□□ -1.62
HMGB1P24-202ENST00000615653 FKBP4Q02790 459 aaKnown RBP eCLIP4.95□□□□□ -1.62
HMGB1P24-202ENST00000615653 RETREG2Q8NC44 543 aa4.95□□□□□ -1.62
HMGB1P24-202ENST00000615653 RNF214Q8ND24 703 aa4.95□□□□□ -1.62
HMGB1P24-202ENST00000615653 ZFYVE28Q9HCC9 887 aa4.95□□□□□ -1.62
HMGB1P24-202ENST00000615653 MAPK8IP1Q9UQF2 711 aa4.95□□□□□ -1.62
HMGB1P24-202ENST00000615653 ABL1P00519 1130 aa4.94□□□□□ -1.62
HMGB1P24-202ENST00000615653 ZXDAP98168 799 aa4.94□□□□□ -1.62
HMGB1P24-202ENST00000615653 HNRNPUQ00839 825 aaKnown RBP eCLIP4.94□□□□□ -1.62
HMGB1P24-202ENST00000615653 GPR20Q99678 358 aa4.94□□□□□ -1.62
HMGB1P24-202ENST00000615653 ZC3H12CQ9C0D7 883 aaKnown RBP4.94□□□□□ -1.62
HMGB1P24-202ENST00000615653 SLAMF8Q9P0V8 285 aa4.94□□□□□ -1.62
HMGB1P24-202ENST00000615653 DNAJC25-GNG10A0A024R161 153 aa4.93□□□□□ -1.62
HMGB1P24-202ENST00000615653 ICMTO60725 284 aa4.93□□□□□ -1.62
HMGB1P24-202ENST00000615653 ERVK-24P63145 666 aa4.93□□□□□ -1.62
HMGB1P24-202ENST00000615653 PLP2Q04941 152 aa4.93□□□□□ -1.62
HMGB1P24-202ENST00000615653 SSPNQ14714 243 aa4.93□□□□□ -1.62
HMGB1P24-202ENST00000615653 C22orf34Q6ZV56 151 aa4.93□□□□□ -1.62
HMGB1P24-202ENST00000615653 ZDHHC14Q8IZN3 488 aa4.93□□□□□ -1.62
HMGB1P24-202ENST00000615653 DACT3Q96B18 629 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P24-202ENST00000615653 RNF32Q9H0A6 362 aa4.93□□□□□ -1.62
HMGB1P24-202ENST00000615653 DNAJC25Q9H1X3 360 aa4.93□□□□□ -1.62
HMGB1P24-202ENST00000615653 PRDM5Q9NQX1 630 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P24-202ENST00000615653 POLIQ9UNA4 740 aa4.93□□□□□ -1.62
HMGB1P24-202ENST00000615653 CARNS1A5YM72 827 aa4.92□□□□□ -1.62
HMGB1P24-202ENST00000615653 H3BS24 57 aa4.92□□□□□ -1.62
HMGB1P24-202ENST00000615653 POLR3DP05423 398 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P24-202ENST00000615653 TNFRSF1AP19438 455 aa4.92□□□□□ -1.62
HMGB1P24-202ENST00000615653 ZNF211Q13398 564 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P24-202ENST00000615653 MTMR3Q13615 1198 aa4.92□□□□□ -1.62
HMGB1P24-202ENST00000615653 AAMPQ13685 434 aa4.92□□□□□ -1.62
HMGB1P24-202ENST00000615653 ZC3H12AQ5D1E8 599 aaKnown RBP4.92□□□□□ -1.62
HMGB1P24-202ENST00000615653 RALGPS1Q5JS13 557 aa4.92□□□□□ -1.62
HMGB1P24-202ENST00000615653 HHIPL2Q6UWX4 724 aa4.92□□□□□ -1.62
HMGB1P24-202ENST00000615653 THAP5Q7Z6K1 395 aa4.92□□□□□ -1.62
HMGB1P24-202ENST00000615653 ZNF605Q86T29 641 aa4.92□□□□□ -1.62
HMGB1P24-202ENST00000615653 GLYCTKQ8IVS8 523 aa4.92□□□□□ -1.62
HMGB1P24-202ENST00000615653 GJD3Q8N144 294 aa4.92□□□□□ -1.62
HMGB1P24-202ENST00000615653 SLC6A17Q9H1V8 727 aa4.92□□□□□ -1.62
HMGB1P24-202ENST00000615653 ZNF552Q9H707 407 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms