RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 IL1R1P14778 569 aa22.24■■□□□ 1.15
MMP28-204ENST00000615136 SART3Q15020 963 aaKnown RBP22.24■■□□□ 1.15
MMP28-204ENST00000615136 SH3RF3Q8TEJ3 882 aaPredicted RBP22.24■■□□□ 1.15
MMP28-204ENST00000615136 RCOR1Q9UKL0 485 aa22.24■■□□□ 1.15
MMP28-204ENST00000615136 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.24■■□□□ 1.15
MMP28-204ENST00000615136 NID2Q14112 1375 aa22.23■■□□□ 1.15
MMP28-204ENST00000615136 USP17L8P0C7I0 530 aa22.23■■□□□ 1.15
MMP28-204ENST00000615136 SRGNP10124 158 aa22.23■■□□□ 1.15
MMP28-204ENST00000615136 ENAHQ8N8S7 591 aaPredicted RBP22.23■■□□□ 1.15
MMP28-204ENST00000615136 UBAC1Q9BSL1 405 aa22.23■■□□□ 1.15
MMP28-204ENST00000615136 TNMDQ9H2S6 317 aa22.23■■□□□ 1.15
MMP28-204ENST00000615136 COL11A2P13942 1736 aaPredicted RBP22.23■■□□□ 1.15
MMP28-204ENST00000615136 ERICH2A1L162 156 aa22.23■■□□□ 1.15
MMP28-204ENST00000615136 C6orf229H3BNL8 230 aa22.23■■□□□ 1.15
MMP28-204ENST00000615136 GUCY1A2P33402 732 aa22.23■■□□□ 1.15
MMP28-204ENST00000615136 IARSP41252 1262 aaKnown RBP22.23■■□□□ 1.15
MMP28-204ENST00000615136 KIF23Q02241 960 aaPredicted RBP22.23■■□□□ 1.15
MMP28-204ENST00000615136 TYRO3Q06418 890 aa22.23■■□□□ 1.15
MMP28-204ENST00000615136 ATL3Q6DD88 541 aa22.23■■□□□ 1.15
MMP28-204ENST00000615136 ZNF654Q8IZM8 581 aa22.23■■□□□ 1.15
MMP28-204ENST00000615136 FAM200AQ8TCP9 573 aa22.23■■□□□ 1.15
MMP28-204ENST00000615136 SLC26A6Q9BXS9 759 aa22.23■■□□□ 1.15
MMP28-204ENST00000615136 ATP8A2Q9NTI2 1148 aa22.23■■□□□ 1.15
MMP28-204ENST00000615136 MKRN1Q9UHC7 482 aaKnown RBP22.23■■□□□ 1.15
MMP28-204ENST00000615136 MRVI1Q9Y6F6 885 aa22.23■■□□□ 1.15
MMP28-204ENST00000615136 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.23■■□□□ 1.15
MMP28-204ENST00000615136 GOLGB1Q14789 3259 aaKnown RBP22.23■■□□□ 1.15
MMP28-204ENST00000615136 CDKL5O76039 1030 aa22.22■■□□□ 1.15
MMP28-204ENST00000615136 HMGB2P26583 209 aaKnown RBP22.22■■□□□ 1.15
MMP28-204ENST00000615136 CAMK4Q16566 473 aa22.22■■□□□ 1.15
MMP28-204ENST00000615136 CCDC82Q8N4S0 544 aa22.22■■□□□ 1.15
MMP28-204ENST00000615136 NUP133Q8WUM0 1156 aa22.22■■□□□ 1.15
MMP28-204ENST00000615136 ZSCAN10Q96SZ4 725 aaPredicted RBP22.22■■□□□ 1.15
MMP28-204ENST00000615136 NMT2O60551 498 aa22.21■■□□□ 1.15
MMP28-204ENST00000615136 NR1I2O75469 434 aa22.21■■□□□ 1.15
MMP28-204ENST00000615136 KRT40Q6A162 431 aa22.21■■□□□ 1.15
MMP28-204ENST00000615136 SP8Q8IXZ3 490 aa22.21■■□□□ 1.15
MMP28-204ENST00000615136 BICD2Q8TD16 824 aa22.21■■□□□ 1.15
MMP28-204ENST00000615136 MTA3Q9BTC8 594 aa22.21■■□□□ 1.15
MMP28-204ENST00000615136 RTN1Q16799 776 aa22.21■■□□□ 1.15
MMP28-204ENST00000615136 FAM47AQ5JRC9 791 aa22.21■■□□□ 1.15
MMP28-204ENST00000615136 SYNE3Q6ZMZ3 975 aa22.21■■□□□ 1.15
MMP28-204ENST00000615136 MCM9Q9NXL9 1143 aa22.21■■□□□ 1.15
MMP28-204ENST00000615136 CLIC4Q9Y696 253 aa22.21■■□□□ 1.15
MMP28-204ENST00000615136 RIMBP2O15034 1052 aa22.2■■□□□ 1.14
MMP28-204ENST00000615136 IFNAR1P17181 557 aa22.2■■□□□ 1.14
MMP28-204ENST00000615136 TERF1P54274 439 aa22.2■■□□□ 1.14
MMP28-204ENST00000615136 CPLX2Q6PUV4 134 aaKnown RBP22.2■■□□□ 1.14
MMP28-204ENST00000615136 NBPF11Q86T75 865 aa22.2■■□□□ 1.14
MMP28-204ENST00000615136 ZNF396Q96N95 335 aaPredicted RBP22.2■■□□□ 1.14
MMP28-204ENST00000615136 RTFDC1Q9BY42 306 aaPredicted RBP22.2■■□□□ 1.14
MMP28-204ENST00000615136 ATP6V0A2Q9Y487 856 aa22.2■■□□□ 1.14
MMP28-204ENST00000615136 FMNL1O95466 1100 aaPredicted RBP22.19■■□□□ 1.14
MMP28-204ENST00000615136 SBK1Q52WX2 424 aa22.19■■□□□ 1.14
MMP28-204ENST00000615136 POTEAQ6S8J7 498 aa22.19■■□□□ 1.14
MMP28-204ENST00000615136 FANCBQ8NB91 859 aa22.19■■□□□ 1.14
MMP28-204ENST00000615136 ARPP21Q9UBL0 812 aaPredicted RBP22.19■■□□□ 1.14
MMP28-204ENST00000615136 TPM2P07951 284 aa22.19■■□□□ 1.14
MMP28-204ENST00000615136 MYSM1Q5VVJ2 828 aa22.19■■□□□ 1.14
MMP28-204ENST00000615136 TMTC2Q8N394 836 aa22.19■■□□□ 1.14
MMP28-204ENST00000615136 GOLPH3LQ9H4A5 285 aa22.19■■□□□ 1.14
MMP28-204ENST00000615136 MROH7-TTC4A0A0A0MT08 1334 aa22.19■■□□□ 1.14
MMP28-204ENST00000615136 DLEC1Q9Y238 1755 aa22.18■■□□□ 1.14
MMP28-204ENST00000615136 AP5Z1O43299 807 aa22.18■■□□□ 1.14
MMP28-204ENST00000615136 SSRP1Q08945 709 aaKnown RBP22.18■■□□□ 1.14
MMP28-204ENST00000615136 TMED8Q6PL24 325 aaPredicted RBP22.18■■□□□ 1.14
MMP28-204ENST00000615136 ORC4O43929 436 aa22.18■■□□□ 1.14
MMP28-204ENST00000615136 USP5P45974 858 aa22.18■■□□□ 1.14
MMP28-204ENST00000615136 MFSD14BQ5SR56 506 aa22.18■■□□□ 1.14
MMP28-204ENST00000615136 CKAP2LQ8IYA6 745 aa22.18■■□□□ 1.14
MMP28-204ENST00000615136 TGFBRAP1Q8WUH2 860 aa22.18■■□□□ 1.14
MMP28-204ENST00000615136 DYNLL2Q96FJ2 89 aa22.18■■□□□ 1.14
MMP28-204ENST00000615136 RTEL1Q9NZ71 1219 aa22.18■■□□□ 1.14
MMP28-204ENST00000615136 PARP3Q9Y6F1 533 aa22.18■■□□□ 1.14
MMP28-204ENST00000615136 STK36Q9NRP7 1315 aa22.17■■□□□ 1.14
MMP28-204ENST00000615136 CDK5RAP2Q96SN8 1893 aa22.17■■□□□ 1.14
MMP28-204ENST00000615136 NPR1P16066 1061 aa22.17■■□□□ 1.14
MMP28-204ENST00000615136 PPP4CP60510 307 aa22.17■■□□□ 1.14
MMP28-204ENST00000615136 KIAA2012Q0VF49 1180 aa22.17■■□□□ 1.14
MMP28-204ENST00000615136 CRACR2BQ8N4Y2 399 aaPredicted RBP22.17■■□□□ 1.14
MMP28-204ENST00000615136 BTDP43251 543 aa22.16■■□□□ 1.14
MMP28-204ENST00000615136 GSTO1P78417 241 aa22.16■■□□□ 1.14
MMP28-204ENST00000615136 IFIT1BQ5T764 474 aaKnown RBP22.16■■□□□ 1.14
MMP28-204ENST00000615136 C12orf60Q5U649 245 aa22.16■■□□□ 1.14
MMP28-204ENST00000615136 BRAPQ7Z569 592 aa22.16■■□□□ 1.14
MMP28-204ENST00000615136 PCP11498 1178 aaKnown RBP22.16■■□□□ 1.14
MMP28-204ENST00000615136 MAPKAPK5Q8IW41 473 aa22.16■■□□□ 1.14
MMP28-204ENST00000615136 LINC00301Q8NCQ3 95 aa22.16■■□□□ 1.14
MMP28-204ENST00000615136 FLAD1Q8NFF5 587 aa22.16■■□□□ 1.14
MMP28-204ENST00000615136 PCDHA7Q9UN72 937 aa22.16■■□□□ 1.14
MMP28-204ENST00000615136 GTF2IP78347 998 aa22.15■■□□□ 1.14
MMP28-204ENST00000615136 EZH2Q15910 746 aaKnown RBP22.15■■□□□ 1.14
MMP28-204ENST00000615136 TMC4Q7Z404 712 aa22.15■■□□□ 1.14
MMP28-204ENST00000615136 IQCA1Q86XH1 822 aa22.15■■□□□ 1.14
MMP28-204ENST00000615136 CCAR1Q8IX12 1150 aaKnown RBP22.15■■□□□ 1.14
MMP28-204ENST00000615136 NAV1Q8NEY1 1877 aa22.15■■□□□ 1.14
MMP28-204ENST00000615136 ME1P48163 572 aa22.14■■□□□ 1.14
MMP28-204ENST00000615136 PLCD1P51178 756 aa22.14■■□□□ 1.14
MMP28-204ENST00000615136 RCAN1P53805 252 aa22.14■■□□□ 1.14
MMP28-204ENST00000615136 TROAPQ12815 778 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms