RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 SYCP1Q15431 976 aa15.73■□□□□ 0.11
HPS1-215ENST00000613394 TERF2Q15554 542 aa15.73■□□□□ 0.11
HPS1-215ENST00000613394 CAGE1Q8TC20 777 aa15.73■□□□□ 0.11
HPS1-215ENST00000613394 OXER1Q8TDS5 423 aa15.73■□□□□ 0.11
HPS1-215ENST00000613394 CNNM2Q9H8M5 875 aa15.73■□□□□ 0.11
HPS1-215ENST00000613394 MEGF6O75095 1541 aa15.73■□□□□ 0.11
HPS1-215ENST00000613394 TMEM94Q12767 1356 aa15.73■□□□□ 0.11
HPS1-215ENST00000613394 ERVV-2B6SEH9 535 aa15.73■□□□□ 0.11
HPS1-215ENST00000613394 IKBKBO14920 756 aa15.73■□□□□ 0.11
HPS1-215ENST00000613394 GYS2P54840 703 aa15.73■□□□□ 0.11
HPS1-215ENST00000613394 RILPL1Q5EBL4 403 aa15.73■□□□□ 0.11
HPS1-215ENST00000613394 IFIT1BQ5T764 474 aaKnown RBP15.73■□□□□ 0.11
HPS1-215ENST00000613394 TOGARAM2Q6ZUX3 1019 aa15.73■□□□□ 0.11
HPS1-215ENST00000613394 IQCA1Q86XH1 822 aa15.73■□□□□ 0.11
HPS1-215ENST00000613394 VSTM4Q8IW00 320 aa15.73■□□□□ 0.11
HPS1-215ENST00000613394 CSRNP2Q9H175 543 aa15.73■□□□□ 0.11
HPS1-215ENST00000613394 CYP2D7A0A087X1C5 515 aa15.72■□□□□ 0.11
HPS1-215ENST00000613394 AKR1B15C9JRZ8 316 aaPredicted RBP15.72■□□□□ 0.11
HPS1-215ENST00000613394 MTF1Q14872 753 aa15.72■□□□□ 0.11
HPS1-215ENST00000613394 PUM3Q15397 648 aaKnown RBP15.72■□□□□ 0.11
HPS1-215ENST00000613394 EPSTI1Q96J88 318 aa15.72■□□□□ 0.11
HPS1-215ENST00000613394 RNF41Q9H4P4 317 aaPredicted RBP15.72■□□□□ 0.11
HPS1-215ENST00000613394 PATL2C9JE40 543 aaKnown RBP15.72■□□□□ 0.11
HPS1-215ENST00000613394 WDR24Q96S15 920 aa15.72■□□□□ 0.11
HPS1-215ENST00000613394 BAZ2BQ9UIF8 2168 aaKnown RBP15.72■□□□□ 0.11
HPS1-215ENST00000613394 ZNF654Q8IZM8 581 aa15.72■□□□□ 0.11
HPS1-215ENST00000613394 LCORLQ8N3X6 602 aa15.72■□□□□ 0.11
HPS1-215ENST00000613394 CTNND2Q9UQB3 1225 aa15.72■□□□□ 0.11
HPS1-215ENST00000613394 UBN2Q6ZU65 1347 aa15.72■□□□□ 0.11
HPS1-215ENST00000613394 FAM205CA6NFA0 338 aa15.71■□□□□ 0.11
HPS1-215ENST00000613394 SOWAHDA6NJG2 315 aa15.71■□□□□ 0.11
HPS1-215ENST00000613394 ZBTB22O15209 634 aa15.71■□□□□ 0.11
HPS1-215ENST00000613394 PNMA6AP0CW24 399 aaPredicted RBP15.71■□□□□ 0.11
HPS1-215ENST00000613394 CDC25AP30304 524 aa15.71■□□□□ 0.11
HPS1-215ENST00000613394 NCAPHQ15003 741 aa15.71■□□□□ 0.11
HPS1-215ENST00000613394 CTCFLQ8NI51 663 aaPredicted RBP15.71■□□□□ 0.11
HPS1-215ENST00000613394 ESR2Q92731 530 aa15.71■□□□□ 0.11
HPS1-215ENST00000613394 TEX13AQ9BXU3 409 aaPredicted RBP15.71■□□□□ 0.11
HPS1-215ENST00000613394 AGXT2Q9BYV1 514 aa15.71■□□□□ 0.11
HPS1-215ENST00000613394 MORC2Q9Y6X9 1032 aaPredicted RBP15.71■□□□□ 0.11
HPS1-215ENST00000613394 NLRP10Q86W26 655 aa15.71■□□□□ 0.11
HPS1-215ENST00000613394 LPIN2Q92539 896 aa15.71■□□□□ 0.11
HPS1-215ENST00000613394 TIGD1Q96MW7 591 aa15.71■□□□□ 0.11
HPS1-215ENST00000613394 STRBPQ96SI9 672 aaKnown RBP15.71■□□□□ 0.11
HPS1-215ENST00000613394 RFX7Q2KHR2 1363 aa15.71■□□□□ 0.11
HPS1-215ENST00000613394 PPP6R2O75170 966 aa15.71■□□□□ 0.11
HPS1-215ENST00000613394 DEXIO95424 95 aa15.71■□□□□ 0.11
HPS1-215ENST00000613394 CCDC24Q8N4L8 307 aa15.71■□□□□ 0.11
HPS1-215ENST00000613394 MLKLQ8NB16 471 aa15.71■□□□□ 0.11
HPS1-215ENST00000613394 SRRTQ9BXP5 876 aaKnown RBP15.71■□□□□ 0.11
HPS1-215ENST00000613394 GNL3LQ9NVN8 582 aaKnown RBP15.71■□□□□ 0.11
HPS1-215ENST00000613394 SALL1Q9NSC2 1324 aa15.7■□□□□ 0.1
HPS1-215ENST00000613394 PDE8AO60658 829 aa15.7■□□□□ 0.1
HPS1-215ENST00000613394 OAS2P29728 719 aaKnown RBP15.7■□□□□ 0.1
HPS1-215ENST00000613394 FMR1Q06787 632 aaKnown RBP eCLIP15.7■□□□□ 0.12e-6■■■■□ 22.7
HPS1-215ENST00000613394 RASGRF1Q13972 1273 aa15.7■□□□□ 0.1
HPS1-215ENST00000613394 HINFPQ9BQA5 517 aa15.7■□□□□ 0.1
HPS1-215ENST00000613394 PODXL2Q9NZ53 605 aa15.7■□□□□ 0.1
HPS1-215ENST00000613394 GUCA1BQ9UMX6 200 aa15.7■□□□□ 0.1
HPS1-215ENST00000613394 GOLGA6L9A6NEM1 432 aa15.7■□□□□ 0.1
HPS1-215ENST00000613394 RAD21O60216 631 aa15.7■□□□□ 0.1
HPS1-215ENST00000613394 TXLNAP40222 546 aa15.7■□□□□ 0.1
HPS1-215ENST00000613394 EIF5P55010 431 aaKnown RBP15.7■□□□□ 0.1
HPS1-215ENST00000613394 RESP18Q5W5W9 173 aa15.7■□□□□ 0.1
HPS1-215ENST00000613394 GIGYF2Q6Y7W6 1299 aaKnown RBP15.7■□□□□ 0.1
HPS1-215ENST00000613394 LRP10Q7Z4F1 713 aa15.7■□□□□ 0.1
HPS1-215ENST00000613394 FANCBQ8NB91 859 aa15.7■□□□□ 0.1
HPS1-215ENST00000613394 PIGBQ92521 554 aa15.7■□□□□ 0.1
HPS1-215ENST00000613394 GOLGA1Q92805 767 aa15.7■□□□□ 0.1
HPS1-215ENST00000613394 TAB2Q9NYJ8 693 aa15.7■□□□□ 0.1
HPS1-215ENST00000613394 NIP7Q9Y221 180 aaKnown RBP eCLIP15.7■□□□□ 0.1
HPS1-215ENST00000613394 UBE3CQ15386 1083 aa15.7■□□□□ 0.1
HPS1-215ENST00000613394 KANK3Q6NY19 840 aa15.7■□□□□ 0.1
HPS1-215ENST00000613394 LY9Q9HBG7 655 aa15.7■□□□□ 0.1
HPS1-215ENST00000613394 TEX33O43247 280 aa15.69■□□□□ 0.1
HPS1-215ENST00000613394 FOXP4Q8IVH2 680 aaPredicted RBP15.69■□□□□ 0.1
HPS1-215ENST00000613394 NKX2-3Q8TAU0 364 aa15.69■□□□□ 0.1
HPS1-215ENST00000613394 ISCA1Q9BUE6 129 aa15.69■□□□□ 0.1
HPS1-215ENST00000613394 CALCOCO1Q9P1Z2 691 aa15.69■□□□□ 0.1
HPS1-215ENST00000613394 NAP1L1P55209 391 aaKnown RBP15.69■□□□□ 0.1
HPS1-215ENST00000613394 PIK3AP1Q6ZUJ8 805 aa15.69■□□□□ 0.1
HPS1-215ENST00000613394 ATG3Q9NT62 314 aa15.69■□□□□ 0.1
HPS1-215ENST00000613394 BTG4Q9NY30 223 aa15.69■□□□□ 0.1
HPS1-215ENST00000613394 SYNRGQ9UMZ2 1314 aa15.69■□□□□ 0.1
HPS1-215ENST00000613394 MAGEB6P1A0A0J9YX57 407 aa15.69■□□□□ 0.1
HPS1-215ENST00000613394 GYG1P46976 350 aa15.69■□□□□ 0.1
HPS1-215ENST00000613394 CAPZA3Q96KX2 299 aa15.69■□□□□ 0.1
HPS1-215ENST00000613394 AK7Q96M32 723 aa15.69■□□□□ 0.1
HPS1-215ENST00000613394 GDAP1L1Q96MZ0 367 aa15.69■□□□□ 0.1
HPS1-215ENST00000613394 SLIT1O75093 1534 aa15.69■□□□□ 0.1
HPS1-215ENST00000613394 MAP3K15Q6ZN16 1313 aa15.68■□□□□ 0.1
HPS1-215ENST00000613394 ERCC3P19447 782 aa15.68■□□□□ 0.1
HPS1-215ENST00000613394 KRT2P35908 639 aa15.68■□□□□ 0.1
HPS1-215ENST00000613394 DNA2P51530 1060 aa15.68■□□□□ 0.1
HPS1-215ENST00000613394 FAM47AQ5JRC9 791 aa15.68■□□□□ 0.1
HPS1-215ENST00000613394 KIAA1328Q86T90 577 aa15.68■□□□□ 0.1
HPS1-215ENST00000613394 SLF1Q9BQI6 1058 aa15.68■□□□□ 0.1
HPS1-215ENST00000613394 TRIM34Q9BYJ4 488 aa15.68■□□□□ 0.1
HPS1-215ENST00000613394 MAGEC2Q9UBF1 373 aaPredicted RBP15.68■□□□□ 0.1
HPS1-215ENST00000613394 TNKSO95271 1327 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms