RNA–Protein interactions for RNA: ENST00000612548.4

CIT-219, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene CIT, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-219ENST00000612548 DICER1Q9UPY3 1922 aaKnown RBP17.39■□□□□ 0.38
CIT-219ENST00000612548 FZD9O00144 591 aa17.39■□□□□ 0.37
CIT-219ENST00000612548 ZKSCAN3Q9BRR0 538 aa17.39■□□□□ 0.37
CIT-219ENST00000612548 OSBPL5Q9H0X9 879 aaPredicted RBP17.39■□□□□ 0.37
CIT-219ENST00000612548 TDRD3Q9H7E2 651 aaKnown RBP17.39■□□□□ 0.37
CIT-219ENST00000612548 ANGEL1Q9UNK9 670 aaKnown RBP17.39■□□□□ 0.37
CIT-219ENST00000612548 SBF1O95248 1867 aa17.38■□□□□ 0.37
CIT-219ENST00000612548 IFIT3O14879 490 aaKnown RBP17.38■□□□□ 0.37
CIT-219ENST00000612548 ORC4O43929 436 aa17.38■□□□□ 0.37
CIT-219ENST00000612548 YBX3P16989 372 aaKnown RBP eCLIP17.38■□□□□ 0.37
CIT-219ENST00000612548 TMEM67Q5HYA8 995 aa17.38■□□□□ 0.37
CIT-219ENST00000612548 PRMT6Q96LA8 375 aaPredicted RBP17.38■□□□□ 0.37
CIT-219ENST00000612548 CHMP5Q9NZZ3 219 aa17.38■□□□□ 0.37
CIT-219ENST00000612548 KLF18A0A0U1RQI7 1052 aa17.38■□□□□ 0.37
CIT-219ENST00000612548 SPDYE2BA6NHP3 402 aa17.38■□□□□ 0.37
CIT-219ENST00000612548 SPDYE6P0CI01 402 aa17.38■□□□□ 0.37
CIT-219ENST00000612548 LMNB1P20700 586 aa17.38■□□□□ 0.37
CIT-219ENST00000612548 DLGAP5Q15398 846 aa17.38■□□□□ 0.37
CIT-219ENST00000612548 SLC44A5Q8NCS7 719 aa17.38■□□□□ 0.37
CIT-219ENST00000612548 IGDCC4Q8TDY8 1250 aa17.38■□□□□ 0.37
CIT-219ENST00000612548 GTF3C6Q969F1 213 aa17.38■□□□□ 0.37
CIT-219ENST00000612548 CWC22Q9HCG8 908 aaKnown RBP17.38■□□□□ 0.37
CIT-219ENST00000612548 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.38■□□□□ 0.37
CIT-219ENST00000612548 GJA3Q9Y6H8 435 aa17.38■□□□□ 0.37
CIT-219ENST00000612548 ZNF541Q9H0D2 1346 aa17.37■□□□□ 0.37
CIT-219ENST00000612548 DTNBO60941 627 aa17.37■□□□□ 0.37
CIT-219ENST00000612548 TCP10Q12799 353 aa17.37■□□□□ 0.37
CIT-219ENST00000612548 SART3Q15020 963 aaKnown RBP17.37■□□□□ 0.37
CIT-219ENST00000612548 UBAC1Q9BSL1 405 aa17.37■□□□□ 0.37
CIT-219ENST00000612548 LY9Q9HBG7 655 aa17.37■□□□□ 0.37
CIT-219ENST00000612548 MKNK2Q9HBH9 465 aa17.37■□□□□ 0.37
CIT-219ENST00000612548 SENP2Q9HC62 589 aa17.37■□□□□ 0.37
CIT-219ENST00000612548 BRPF3Q9ULD4 1205 aa17.37■□□□□ 0.37
CIT-219ENST00000612548 SHTN1A0MZ66 631 aa17.36■□□□□ 0.37
CIT-219ENST00000612548 GOLGA8BA8MQT2 603 aa17.36■□□□□ 0.37
CIT-219ENST00000612548 PFKFB2O60825 505 aa17.36■□□□□ 0.37
CIT-219ENST00000612548 PDIA3P30101 505 aaKnown RBP17.36■□□□□ 0.37
CIT-219ENST00000612548 SCRN1Q12765 414 aa17.36■□□□□ 0.37
CIT-219ENST00000612548 FAM47AQ5JRC9 791 aa17.36■□□□□ 0.37
CIT-219ENST00000612548 C16orf86Q6ZW13 317 aa17.36■□□□□ 0.37
CIT-219ENST00000612548 RAB11FIP4Q86YS3 637 aa17.36■□□□□ 0.37
CIT-219ENST00000612548 ZNF274Q96GC6 653 aaPredicted RBP17.36■□□□□ 0.37
CIT-219ENST00000612548 IDI2Q9BXS1 227 aa17.36■□□□□ 0.37
CIT-219ENST00000612548 FAM198AQ9UFP1 575 aa17.36■□□□□ 0.37
CIT-219ENST00000612548 CIZ1Q9ULV3 898 aaPredicted RBP17.36■□□□□ 0.37
CIT-219ENST00000612548 ERICH2A1L162 156 aa17.35■□□□□ 0.37
CIT-219ENST00000612548 RPS12P25398 132 aaKnown RBP17.35■□□□□ 0.37
CIT-219ENST00000612548 EVCP57679 992 aa17.35■□□□□ 0.37
CIT-219ENST00000612548 CCT2P78371 535 aaKnown RBP17.35■□□□□ 0.37
CIT-219ENST00000612548 WTAPQ15007 396 aa17.35■□□□□ 0.37
CIT-219ENST00000612548 NFXL1Q6ZNB6 911 aa17.35■□□□□ 0.37
CIT-219ENST00000612548 TTC6Q86TZ1 520 aa17.35■□□□□ 0.37
CIT-219ENST00000612548 ZFPM1Q8IX07 1006 aa17.35■□□□□ 0.37
CIT-219ENST00000612548 SMC3Q9UQE7 1217 aa17.35■□□□□ 0.37
CIT-219ENST00000612548 TNKSO95271 1327 aa17.35■□□□□ 0.37
CIT-219ENST00000612548 CLRN2A0PK11 232 aa17.35■□□□□ 0.37
CIT-219ENST00000612548 TSPY2A6NKD2 308 aa17.35■□□□□ 0.37
CIT-219ENST00000612548 CDK8P49336 464 aa17.35■□□□□ 0.37
CIT-219ENST00000612548 GMPSP49915 693 aaPredicted RBP17.35■□□□□ 0.37
CIT-219ENST00000612548 IQCA1Q86XH1 822 aa17.35■□□□□ 0.37
CIT-219ENST00000612548 MTA3Q9BTC8 594 aa17.35■□□□□ 0.37
CIT-219ENST00000612548 TMOD2Q9NZR1 351 aa17.35■□□□□ 0.37
CIT-219ENST00000612548 MYH8P13535 1937 aa17.35■□□□□ 0.37
CIT-219ENST00000612548 LIFRP42702 1097 aa17.34■□□□□ 0.37
CIT-219ENST00000612548 SGMS1Q86VZ5 419 aa17.34■□□□□ 0.37
CIT-219ENST00000612548 MTMR14Q8NCE2 650 aa17.34■□□□□ 0.37
CIT-219ENST00000612548 ZSCAN10Q96SZ4 725 aaPredicted RBP17.34■□□□□ 0.37
CIT-219ENST00000612548 NCOA5Q9HCD5 579 aaKnown RBP17.34■□□□□ 0.37
CIT-219ENST00000612548 MYOZ2Q9NPC6 264 aa17.34■□□□□ 0.37
CIT-219ENST00000612548 SIPA1L1O43166 1804 aa17.34■□□□□ 0.37
CIT-219ENST00000612548 CCDC69A6NI79 296 aa17.33■□□□□ 0.37
CIT-219ENST00000612548 HLA-DOAP06340 250 aa17.33■□□□□ 0.37
CIT-219ENST00000612548 TFAP4Q01664 338 aa17.33■□□□□ 0.37
CIT-219ENST00000612548 ZNF444Q8N0Y2 327 aaPredicted RBP17.33■□□□□ 0.37
CIT-219ENST00000612548 ZNF287Q9HBT7 754 aa17.33■□□□□ 0.37
CIT-219ENST00000612548 ZNF70Q9UC06 446 aaPredicted RBP17.33■□□□□ 0.37
CIT-219ENST00000612548 HPS5Q9UPZ3 1129 aa17.33■□□□□ 0.37
CIT-219ENST00000612548 NMT2O60551 498 aa17.33■□□□□ 0.36
CIT-219ENST00000612548 NPM3O75607 178 aaKnown RBP17.33■□□□□ 0.36
CIT-219ENST00000612548 RASA1P20936 1047 aa17.33■□□□□ 0.36
CIT-219ENST00000612548 GJB2P29033 226 aa17.33■□□□□ 0.36
CIT-219ENST00000612548 ZNF280AP59817 542 aaPredicted RBP17.33■□□□□ 0.36
CIT-219ENST00000612548 SEC23AQ15436 765 aa17.33■□□□□ 0.36
CIT-219ENST00000612548 SPDYE2Q495Y8 402 aa17.33■□□□□ 0.36
CIT-219ENST00000612548 APOA5Q6Q788 366 aa17.33■□□□□ 0.36
CIT-219ENST00000612548 MICU3Q86XE3 530 aa17.33■□□□□ 0.36
CIT-219ENST00000612548 ZSCAN29Q8IWY8 852 aaPredicted RBP17.33■□□□□ 0.36
CIT-219ENST00000612548 MICALL2Q8IY33 904 aa17.33■□□□□ 0.36
CIT-219ENST00000612548 ENAHQ8N8S7 591 aaPredicted RBP17.33■□□□□ 0.36
CIT-219ENST00000612548 RNF181Q9P0P0 153 aa17.33■□□□□ 0.36
CIT-219ENST00000612548 DDTLA6NHG4 134 aaPredicted RBP17.32■□□□□ 0.36
CIT-219ENST00000612548 TCP10L2B9ZVM9 353 aa17.32■□□□□ 0.36
CIT-219ENST00000612548 TSPY3P0CV98 308 aa17.32■□□□□ 0.36
CIT-219ENST00000612548 TSPY8P0CW00 308 aa17.32■□□□□ 0.36
CIT-219ENST00000612548 RXRAP19793 462 aa17.32■□□□□ 0.36
CIT-219ENST00000612548 GABPAQ06546 454 aa17.32■□□□□ 0.36
CIT-219ENST00000612548 PKP1Q13835 747 aa17.32■□□□□ 0.36
CIT-219ENST00000612548 DPF2Q92785 391 aa17.32■□□□□ 0.36
CIT-219ENST00000612548 ZBED3Q96IU2 234 aaPredicted RBP17.32■□□□□ 0.36
CIT-219ENST00000612548 MYL10Q9BUA6 226 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms