RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 FARP2O94887 1054 aaPredicted RBP16.44■□□□□ 0.22
HMGB1P24-201ENST00000611897 INHAP05111 366 aa16.44■□□□□ 0.22
HMGB1P24-201ENST00000611897 GJB1P08034 283 aa16.44■□□□□ 0.22
HMGB1P24-201ENST00000611897 MCAMP43121 646 aa16.44■□□□□ 0.22
HMGB1P24-201ENST00000611897 GJA8P48165 433 aa16.44■□□□□ 0.22
HMGB1P24-201ENST00000611897 SPP2Q13103 211 aa16.44■□□□□ 0.22
HMGB1P24-201ENST00000611897 ATF7IPQ6VMQ6 1270 aa16.44■□□□□ 0.22
HMGB1P24-201ENST00000611897 NSUN4Q96CB9 384 aaKnown RBP16.44■□□□□ 0.22
HMGB1P24-201ENST00000611897 OSBPL5Q9H0X9 879 aaPredicted RBP16.44■□□□□ 0.22
HMGB1P24-201ENST00000611897 PNMA3Q9UL41 463 aa16.44■□□□□ 0.22
HMGB1P24-201ENST00000611897 HMGCS2P54868 508 aa16.43■□□□□ 0.22
HMGB1P24-201ENST00000611897 TTC39AQ5SRH9 613 aa16.43■□□□□ 0.22
HMGB1P24-201ENST00000611897 SH3RF3Q8TEJ3 882 aaPredicted RBP16.43■□□□□ 0.22
HMGB1P24-201ENST00000611897 U2AF1L4Q8WU68 220 aaKnown RBP16.43■□□□□ 0.22
HMGB1P24-201ENST00000611897 HTATIP2Q9BUP3 242 aa16.43■□□□□ 0.22
HMGB1P24-201ENST00000611897 AATFQ9NY61 560 aaKnown RBP eCLIP16.43■□□□□ 0.22
HMGB1P24-201ENST00000611897 MYO5AQ9Y4I1 1855 aaKnown RBP16.43■□□□□ 0.22
HMGB1P24-201ENST00000611897 LOC285556D6RIA3 1793 aa16.43■□□□□ 0.22
HMGB1P24-201ENST00000611897 UQCRFS1P1P0C7P4 283 aa16.42■□□□□ 0.22
HMGB1P24-201ENST00000611897 ARID4AP29374 1257 aaPredicted RBP16.42■□□□□ 0.22
HMGB1P24-201ENST00000611897 MAP3K10Q02779 954 aa16.42■□□□□ 0.22
HMGB1P24-201ENST00000611897 NAA16Q6N069 864 aaPredicted RBP16.42■□□□□ 0.22
HMGB1P24-201ENST00000611897 COA7Q96BR5 231 aa16.42■□□□□ 0.22
HMGB1P24-201ENST00000611897 C1orf115Q9H7X2 142 aa16.42■□□□□ 0.22
HMGB1P24-201ENST00000611897 SLC45A1Q9Y2W3 748 aa16.42■□□□□ 0.22
HMGB1P24-201ENST00000611897 ZBTB22O15209 634 aa16.41■□□□□ 0.22
HMGB1P24-201ENST00000611897 TMEM57Q8N5G2 664 aa16.41■□□□□ 0.22
HMGB1P24-201ENST00000611897 ZNF280CQ8ND82 737 aa16.41■□□□□ 0.22
HMGB1P24-201ENST00000611897 DEFB118Q96PH6 123 aa16.41■□□□□ 0.22
HMGB1P24-201ENST00000611897 TRIM34Q9BYJ4 488 aa16.41■□□□□ 0.22
HMGB1P24-201ENST00000611897 CDK5RAP2Q96SN8 1893 aa16.41■□□□□ 0.22
HMGB1P24-201ENST00000611897 SIPA1L1O43166 1804 aa16.4■□□□□ 0.22
HMGB1P24-201ENST00000611897 CCER2I3L3R5 266 aa16.4■□□□□ 0.22
HMGB1P24-201ENST00000611897 TBC1D12O60347 775 aa16.4■□□□□ 0.22
HMGB1P24-201ENST00000611897 TFRCP02786 760 aaKnown RBP16.4■□□□□ 0.22
HMGB1P24-201ENST00000611897 RRP1BQ14684 758 aaKnown RBP16.4■□□□□ 0.22
HMGB1P24-201ENST00000611897 FAM110CQ1W6H9 321 aa16.4■□□□□ 0.22
HMGB1P24-201ENST00000611897 MAPKAPK5Q8IW41 473 aa16.4■□□□□ 0.22
HMGB1P24-201ENST00000611897 DBNDD2Q9BQY9 259 aa16.4■□□□□ 0.22
HMGB1P24-201ENST00000611897 COL2A1P02458 1487 aaPredicted RBP16.4■□□□□ 0.22
HMGB1P24-201ENST00000611897 USP17L5A8MUK1 530 aa16.39■□□□□ 0.21
HMGB1P24-201ENST00000611897 CAP2P40123 477 aa16.39■□□□□ 0.21
HMGB1P24-201ENST00000611897 MTMR2Q13614 643 aa16.39■□□□□ 0.21
HMGB1P24-201ENST00000611897 TNNI3KQ59H18 835 aa16.39■□□□□ 0.21
HMGB1P24-201ENST00000611897 CRACR2BQ8N4Y2 399 aaPredicted RBP16.39■□□□□ 0.21
HMGB1P24-201ENST00000611897 PROCA1Q8NCQ7 364 aaPredicted RBP16.39■□□□□ 0.21
HMGB1P24-201ENST00000611897 TGFBRAP1Q8WUH2 860 aa16.39■□□□□ 0.21
HMGB1P24-201ENST00000611897 SAP30BPQ9UHR5 308 aaKnown RBP16.39■□□□□ 0.21
HMGB1P24-201ENST00000611897 FPGT-TNNI3KV9GXZ4 949 aa16.39■□□□□ 0.21
HMGB1P24-201ENST00000611897 RANBP2P49792 3224 aaKnown RBP16.38■□□□□ 0.21
HMGB1P24-201ENST00000611897 NPM3O75607 178 aaKnown RBP16.38■□□□□ 0.21
HMGB1P24-201ENST00000611897 SURF6O75683 361 aaKnown RBP16.38■□□□□ 0.21
HMGB1P24-201ENST00000611897 SGPL1O95470 568 aa16.38■□□□□ 0.21
HMGB1P24-201ENST00000611897 BAG3O95817 575 aa16.38■□□□□ 0.21
HMGB1P24-201ENST00000611897 IRX3P78415 501 aaPredicted RBP16.38■□□□□ 0.21
HMGB1P24-201ENST00000611897 PABPC4Q13310 644 aaKnown RBP eCLIP16.38■□□□□ 0.21
HMGB1P24-201ENST00000611897 IRF5Q13568 498 aa16.38■□□□□ 0.21
HMGB1P24-201ENST00000611897 CCDC158Q5M9N0 1113 aa16.38■□□□□ 0.21
HMGB1P24-201ENST00000611897 ZKSCAN2Q63HK3 967 aa16.38■□□□□ 0.21
HMGB1P24-201ENST00000611897 FTSJ3Q8IY81 847 aaKnown RBP16.38■□□□□ 0.21
HMGB1P24-201ENST00000611897 ASCC2Q9H1I8 757 aaPredicted RBP16.38■□□□□ 0.21
HMGB1P24-201ENST00000611897 AS3MTQ9HBK9 375 aa16.38■□□□□ 0.21
HMGB1P24-201ENST00000611897 RBM27Q9P2N5 1060 aaKnown RBP16.38■□□□□ 0.21
HMGB1P24-201ENST00000611897 HERC5Q9UII4 1024 aaKnown RBP16.38■□□□□ 0.21
HMGB1P24-201ENST00000611897 NR2E3Q9Y5X4 410 aa16.38■□□□□ 0.21
HMGB1P24-201ENST00000611897 GDF11O95390 407 aa16.37■□□□□ 0.21
HMGB1P24-201ENST00000611897 MAP4K4O95819 1239 aaPredicted RBP16.37■□□□□ 0.21
HMGB1P24-201ENST00000611897 SHROOM1Q2M3G4 852 aaPredicted RBP16.37■□□□□ 0.21
HMGB1P24-201ENST00000611897 UBE2Q1Q7Z7E8 422 aa16.37■□□□□ 0.21
HMGB1P24-201ENST00000611897 PXYLP1Q8TE99 480 aa16.37■□□□□ 0.21
HMGB1P24-201ENST00000611897 TMOD4Q9NZQ9 345 aa16.37■□□□□ 0.21
HMGB1P24-201ENST00000611897 PI4KBQ9UBF8 816 aa16.37■□□□□ 0.21
HMGB1P24-201ENST00000611897 FOCADQ5VW36 1801 aa16.37■□□□□ 0.21
HMGB1P24-201ENST00000611897 FLT1P17948 1338 aa16.37■□□□□ 0.21
HMGB1P24-201ENST00000611897 EVI5O60447 810 aa16.36■□□□□ 0.21
HMGB1P24-201ENST00000611897 PLCG2P16885 1265 aa16.36■□□□□ 0.21
HMGB1P24-201ENST00000611897 ZAP70P43403 619 aa16.36■□□□□ 0.21
HMGB1P24-201ENST00000611897 GCLCP48506 637 aaPredicted RBP16.36■□□□□ 0.21
HMGB1P24-201ENST00000611897 ADGRA1Q86SQ6 560 aa16.36■□□□□ 0.21
HMGB1P24-201ENST00000611897 ITPRIPQ8IWB1 547 aa16.36■□□□□ 0.21
HMGB1P24-201ENST00000611897 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.36■□□□□ 0.21
HMGB1P24-201ENST00000611897 PALD1Q9ULE6 856 aa16.36■□□□□ 0.21
HMGB1P24-201ENST00000611897 MYH1P12882 1939 aa16.35■□□□□ 0.21
HMGB1P24-201ENST00000611897 PEX10O60683 326 aa16.35■□□□□ 0.21
HMGB1P24-201ENST00000611897 ASNSP08243 561 aa16.35■□□□□ 0.21
HMGB1P24-201ENST00000611897 DIS3LQ8TF46 1054 aaKnown RBP16.35■□□□□ 0.21
HMGB1P24-201ENST00000611897 TBC1D2Q9BYX2 928 aa16.35■□□□□ 0.21
HMGB1P24-201ENST00000611897 DHX36Q9H2U1 1008 aaKnown RBP16.35■□□□□ 0.21
HMGB1P24-201ENST00000611897 PIH1D3Q9NQM4 214 aaKnown RBP16.35■□□□□ 0.21
HMGB1P24-201ENST00000611897 TLR7Q9NYK1 1049 aaKnown RBP16.35■□□□□ 0.21
HMGB1P24-201ENST00000611897 ALPK3Q96L96 1907 aa16.35■□□□□ 0.21
HMGB1P24-201ENST00000611897 IDH1O75874 414 aaKnown RBP16.34■□□□□ 0.21
HMGB1P24-201ENST00000611897 HMGCRP04035 888 aa16.34■□□□□ 0.21
HMGB1P24-201ENST00000611897 CYP2E1P05181 493 aaPredicted RBP16.34■□□□□ 0.21
HMGB1P24-201ENST00000611897 HLA-DOAP06340 250 aa16.34■□□□□ 0.21
HMGB1P24-201ENST00000611897 CYP7A1P22680 504 aa16.34■□□□□ 0.21
HMGB1P24-201ENST00000611897 DYNLL1P63167 89 aaKnown RBP16.34■□□□□ 0.21
HMGB1P24-201ENST00000611897 TRIM32Q13049 653 aa16.34■□□□□ 0.21
HMGB1P24-201ENST00000611897 ZYXQ15942 572 aaKnown RBP16.34■□□□□ 0.21
HMGB1P24-201ENST00000611897 MIGA1Q8NAN2 632 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms