RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 USP27XA6NNY8 438 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 ENC1O14682 589 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 ZMYND10O75800 440 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 KRT13P13646 458 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 CASP1P29466 404 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 MNAT1P51948 309 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 SP4Q02446 784 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 TBC1D8BQ0IIM8 1120 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 TTC38Q5R3I4 469 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 TTC19Q6DKK2 380 aaPredicted RBP4.28□□□□□ -1.72
RNF38-210ENST00000611646 OSBP2Q969R2 916 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 PAIP2Q9BPZ3 127 aaKnown RBP4.28□□□□□ -1.72
RNF38-210ENST00000611646 ASAP1Q9ULH1 1129 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 MAST3O60307 1309 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 IGSF1Q8N6C5 1336 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 CYP2D7A0A087X1C5 515 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 GOLGA6L10A0A0M3HER8 536 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 TLDC2A0PJX2 215 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 POTEB2H3BUK9 544 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 KRT86O43790 486 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 HOXB7P09629 217 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 KRT9P35527 623 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 GYS2P54840 703 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 NR5A1Q13285 461 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 RILPL1Q5EBL4 403 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 VPS36Q86VN1 386 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 MAPKAPK5Q8IW41 473 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 FAM114A1Q8IWE2 563 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 NELFCDQ8IXH7 590 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 RASGRP4Q8TDF6 673 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 NELFBQ8WX92 580 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 PPP1R13BQ96KQ4 1090 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 FEZ1Q99689 392 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 DSCC1Q9BVC3 393 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 TRIM31Q9BZY9 425 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 EPC1Q9H2F5 836 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 FAM207AQ9NSI2 230 aaPredicted RBP4.28□□□□□ -1.72
RNF38-210ENST00000611646 TAF6LQ9Y6J9 622 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 PREX2Q70Z35 1606 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 GOLGA6L7A0A1B0GV03 622 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 GNPATO15228 680 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 CUTAO60888 179 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 TACC1O75410 805 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 FGFR1OPO95684 399 aaKnown RBP4.28□□□□□ -1.72
RNF38-210ENST00000611646 MRPS25P82663 173 aaKnown RBP4.28□□□□□ -1.72
RNF38-210ENST00000611646 TOB2Q14106 344 aaPredicted RBP4.28□□□□□ -1.72
RNF38-210ENST00000611646 UTP14CQ5TAP6 766 aaKnown RBP4.28□□□□□ -1.72
RNF38-210ENST00000611646 CSGALNACT2Q8N6G5 542 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 CUL5Q93034 780 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 GOLPH3LQ9H4A5 285 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 CARMIL3Q8ND23 1372 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 RTL9Q8NET4 1388 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 PTCH1Q13635 1447 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 TRAF5O00463 557 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 TBCAO75347 108 aaKnown RBP4.28□□□□□ -1.72
RNF38-210ENST00000611646 LDHBP07195 334 aaKnown RBP4.28□□□□□ -1.72
RNF38-210ENST00000611646 MCM3P25205 808 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 PTPN12Q05209 780 aaKnown RBP4.28□□□□□ -1.72
RNF38-210ENST00000611646 PAK1Q13153 545 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 NECTIN1Q15223 517 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 CCDC144BQ3MJ40 725 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 IFNL3Q8IZI9 196 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 KIAA1524Q8TCG1 905 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 RRP36Q96EU6 259 aaKnown RBP4.28□□□□□ -1.72
RNF38-210ENST00000611646 PGBD1Q96JS3 809 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 TMEM87BQ96K49 555 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 NAPGQ99747 312 aaPredicted RBP4.28□□□□□ -1.72
RNF38-210ENST00000611646 SEC31BQ9NQW1 1179 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 PPP2R2CQ9Y2T4 447 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 SSH2Q76I76 1423 aa4.28□□□□□ -1.72
RNF38-210ENST00000611646 USP17L12C9JPN9 530 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 USP17L21D6R901 530 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 PDE8AO60658 829 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 PDE6AP16499 860 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 GNAT2P19087 354 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 PPARAQ07869 468 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 ZYXQ15942 572 aaKnown RBP4.27□□□□□ -1.73
RNF38-210ENST00000611646 WDR78Q5VTH9 848 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 SPECC1LQ69YQ0 1117 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 TYW1BQ6NUM6 668 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 CCDC25Q86WR0 208 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 CNGA4Q8IV77 575 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 FNBP4Q8N3X1 1017 aaPredicted RBP4.27□□□□□ -1.73
RNF38-210ENST00000611646 TGFBRAP1Q8WUH2 860 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 C6orf50Q9HD87 102 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 BIN2Q9UBW5 565 aaPredicted RBP4.27□□□□□ -1.73
RNF38-210ENST00000611646 PCDHA5Q9Y5H7 936 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 A0A0G2JLW4 131 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 FAM182BQ5T319 152 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 NOSTRINQ8IVI9 506 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 ZNF654Q8IZM8 581 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 ANKRD13CQ8N6S4 541 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 JAKMIP2Q96AA8 810 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 SELENOSQ9BQE4 189 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 CSRNP2Q9H175 543 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 NLRC4Q9NPP4 1024 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 AXIN2Q9Y2T1 843 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 USP6P35125 1406 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 AATKQ6ZMQ8 1374 aa4.27□□□□□ -1.73
RNF38-210ENST00000611646 FRMPD2Q68DX3 1309 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms