RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 SEC23AQ15436 765 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 RRP12Q5JTH9 1297 aaKnown RBP12.05□□□□□ -0.48
PABPC1-224ENST00000610907 RESP18Q5W5W9 173 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 TPTE2Q6XPS3 522 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 NBPF11Q86T75 865 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 ZNF654Q8IZM8 581 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 MAP7D2Q96T17 732 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 SETDB2Q96T68 719 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 RNF26Q9BY78 433 aaPredicted RBP12.05□□□□□ -0.48
PABPC1-224ENST00000610907 TOMM22Q9NS69 142 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 TUBE1Q9UJT0 475 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 PYCARDQ9ULZ3 195 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 IKBKBO14920 756 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 MYO1BO43795 1136 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 XBP1P17861 261 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 GTF2F1P35269 517 aaKnown RBP eCLIP12.05□□□□□ -0.48
PABPC1-224ENST00000610907 CHAF1AQ13111 956 aaPredicted RBP12.05□□□□□ -0.48
PABPC1-224ENST00000610907 FAM98CQ17RN3 349 aaKnown RBP12.05□□□□□ -0.48
PABPC1-224ENST00000610907 MTERF4Q7Z6M4 381 aaKnown RBP12.05□□□□□ -0.48
PABPC1-224ENST00000610907 CCDC144CPQ8IYA2 1237 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 MYL10Q9BUA6 226 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 BCL2L12Q9HB09 334 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 RBM28Q9NW13 759 aaKnown RBP12.05□□□□□ -0.48
PABPC1-224ENST00000610907 IMPACTQ9P2X3 320 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 HOOK1Q9UJC3 728 aaKnown RBP12.05□□□□□ -0.48
PABPC1-224ENST00000610907 CEP131Q9UPN4 1083 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 CACNA1SQ13698 1873 aa12.04□□□□□ -0.48
PABPC1-224ENST00000610907 MINDY4BA8MYZ0 360 aa12.04□□□□□ -0.48
PABPC1-224ENST00000610907 ZPR1O75312 459 aa12.04□□□□□ -0.48
PABPC1-224ENST00000610907 MARCKSP29966 332 aaPredicted RBP12.04□□□□□ -0.48
PABPC1-224ENST00000610907 GSDMDP57764 484 aa12.04□□□□□ -0.48
PABPC1-224ENST00000610907 TBC1D9BQ66K14 1250 aa12.04□□□□□ -0.48
PABPC1-224ENST00000610907 C3orf67Q6ZVT6 689 aa12.04□□□□□ -0.48
PABPC1-224ENST00000610907 ADGRA1Q86SQ6 560 aa12.04□□□□□ -0.48
PABPC1-224ENST00000610907 IQCA1Q86XH1 822 aa12.04□□□□□ -0.48
PABPC1-224ENST00000610907 AOPEPQ8N6M6 819 aa12.04□□□□□ -0.48
PABPC1-224ENST00000610907 KRI1Q8N9T8 703 aaKnown RBP12.04□□□□□ -0.48
PABPC1-224ENST00000610907 ZNF579Q8NAF0 562 aaKnown RBP12.04□□□□□ -0.48
PABPC1-224ENST00000610907 HIBADHP31937 336 aaKnown RBP12.03□□□□□ -0.48
PABPC1-224ENST00000610907 AKAP17AQ02040 695 aaKnown RBP12.03□□□□□ -0.48
PABPC1-224ENST00000610907 HSP90AA2PQ14568 343 aaPredicted RBP12.03□□□□□ -0.48
PABPC1-224ENST00000610907 SHC4Q6S5L8 630 aa12.03□□□□□ -0.48
PABPC1-224ENST00000610907 CATIPQ7Z7H3 387 aa12.03□□□□□ -0.48
PABPC1-224ENST00000610907 NBPF5PQ86XG9 351 aaPredicted RBP12.03□□□□□ -0.48
PABPC1-224ENST00000610907 LRRC8AQ8IWT6 810 aa12.03□□□□□ -0.48
PABPC1-224ENST00000610907 DIS3L2Q8IYB7 885 aaKnown RBP12.03□□□□□ -0.48
PABPC1-224ENST00000610907 FNBP4Q8N3X1 1017 aaPredicted RBP12.03□□□□□ -0.48
PABPC1-224ENST00000610907 CELF1Q92879 486 aaKnown RBP12.03□□□□□ -0.48
PABPC1-224ENST00000610907 NSUN4Q96CB9 384 aaKnown RBP12.03□□□□□ -0.48
PABPC1-224ENST00000610907 ZSCAN10Q96SZ4 725 aaPredicted RBP12.03□□□□□ -0.48
PABPC1-224ENST00000610907 ATP8A2Q9NTI2 1148 aa12.03□□□□□ -0.48
PABPC1-224ENST00000610907 NRBP1Q9UHY1 535 aa12.03□□□□□ -0.48
PABPC1-224ENST00000610907 ECM29Q5VYK3 1845 aa12.03□□□□□ -0.48
PABPC1-224ENST00000610907 TNKSO95271 1327 aa12.03□□□□□ -0.48
PABPC1-224ENST00000610907 COL24A1Q17RW2 1714 aa12.03□□□□□ -0.48
PABPC1-224ENST00000610907 COL1A1P02452 1464 aaPredicted RBP12.02□□□□□ -0.48
PABPC1-224ENST00000610907 BTBD18B2RXH4 712 aa12.02□□□□□ -0.49
PABPC1-224ENST00000610907 PRPF3O43395 683 aaKnown RBP12.02□□□□□ -0.49
PABPC1-224ENST00000610907 ORC4O43929 436 aa12.02□□□□□ -0.49
PABPC1-224ENST00000610907 PTPREP23469 700 aa12.02□□□□□ -0.49
PABPC1-224ENST00000610907 SBK1Q52WX2 424 aa12.02□□□□□ -0.49
PABPC1-224ENST00000610907 SPTY2D1Q68D10 685 aaPredicted RBP12.02□□□□□ -0.49
PABPC1-224ENST00000610907 SDR42E1Q8WUS8 393 aa12.02□□□□□ -0.49
PABPC1-224ENST00000610907 NGLY1Q96IV0 654 aa12.02□□□□□ -0.49
PABPC1-224ENST00000610907 ZKSCAN3Q9BRR0 538 aa12.02□□□□□ -0.49
PABPC1-224ENST00000610907 CRNKL1Q9BZJ0 848 aaKnown RBP12.02□□□□□ -0.49
PABPC1-224ENST00000610907 PDCL3Q9H2J4 239 aa12.02□□□□□ -0.49
PABPC1-224ENST00000610907 FAM13BQ9NYF5 915 aa12.02□□□□□ -0.49
PABPC1-224ENST00000610907 IQSEC3Q9UPP2 1182 aaPredicted RBP12.02□□□□□ -0.49
PABPC1-224ENST00000610907 COL4A1P02462 1669 aa12.02□□□□□ -0.49
PABPC1-224ENST00000610907 DDAH1O94760 285 aa12.01□□□□□ -0.49
PABPC1-224ENST00000610907 BMP15O95972 392 aa12.01□□□□□ -0.49
PABPC1-224ENST00000610907 DPCR1Q3MIW9 517 aa12.01□□□□□ -0.49
PABPC1-224ENST00000610907 IFIT1BQ5T764 474 aaKnown RBP12.01□□□□□ -0.49
PABPC1-224ENST00000610907 KANK3Q6NY19 840 aa12.01□□□□□ -0.49
PABPC1-224ENST00000610907 KRBA2Q6ZNG9 492 aa12.01□□□□□ -0.49
PABPC1-224ENST00000610907 CACTINQ8WUQ7 758 aaKnown RBP12.01□□□□□ -0.49
PABPC1-224ENST00000610907 OSBPL5Q9H0X9 879 aaPredicted RBP12.01□□□□□ -0.49
PABPC1-224ENST00000610907 KCND1Q9NSA2 647 aa12.01□□□□□ -0.49
PABPC1-224ENST00000610907 KCNH3Q9ULD8 1083 aa12.01□□□□□ -0.49
PABPC1-224ENST00000610907 RTCBQ9Y3I0 505 aaKnown RBP12.01□□□□□ -0.49
PABPC1-224ENST00000610907 MROH7-TTC4A0A0A0MT08 1334 aa12.01□□□□□ -0.49
PABPC1-224ENST00000610907 CASZ1Q86V15 1759 aa12.01□□□□□ -0.49
PABPC1-224ENST00000610907 DUOX1Q9NRD9 1551 aa12.01□□□□□ -0.49
PABPC1-224ENST00000610907 GUCY1A2P33402 732 aa12.01□□□□□ -0.49
PABPC1-224ENST00000610907 TOB1P50616 345 aaPredicted RBP12.01□□□□□ -0.49
PABPC1-224ENST00000610907 CCDC144BQ3MJ40 725 aa12.01□□□□□ -0.49
PABPC1-224ENST00000610907 CTR9Q6PD62 1173 aa12.01□□□□□ -0.49
PABPC1-224ENST00000610907 BICDL1Q6ZP65 573 aa12.01□□□□□ -0.49
PABPC1-224ENST00000610907 C17orf53Q8N3J3 647 aaPredicted RBP12.01□□□□□ -0.49
PABPC1-224ENST00000610907 ENAHQ8N8S7 591 aaPredicted RBP12.01□□□□□ -0.49
PABPC1-224ENST00000610907 NUP133Q8WUM0 1156 aa12.01□□□□□ -0.49
PABPC1-224ENST00000610907 ARPP21Q9UBL0 812 aaPredicted RBP12.01□□□□□ -0.49
PABPC1-224ENST00000610907 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.01□□□□□ -0.49
PABPC1-224ENST00000610907 SRPRBQ9Y5M8 271 aaKnown RBP12.01□□□□□ -0.49
PABPC1-224ENST00000610907 DYNLL1P63167 89 aaKnown RBP12□□□□□ -0.49
PABPC1-224ENST00000610907 MECOMQ03112 1051 aa12□□□□□ -0.49
PABPC1-224ENST00000610907 FUT2Q10981 343 aa12□□□□□ -0.49
PABPC1-224ENST00000610907 LRMPQ12912 555 aa12□□□□□ -0.49
PABPC1-224ENST00000610907 OLFM4Q6UX06 510 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms