RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 CCDC88AQ3V6T2 1871 aa14.43□□□□□ -0.1
TP53-219ENST00000610538 TCHHQ07283 1943 aa14.43□□□□□ -0.1
TP53-219ENST00000610538 MYH2Q9UKX2 1941 aa14.43□□□□□ -0.1
TP53-219ENST00000610538 GPR75-ASB3A0A0A6YYF3 556 aa14.43□□□□□ -0.1
TP53-219ENST00000610538 ERICH2A1L162 156 aa14.43□□□□□ -0.1
TP53-219ENST00000610538 ZBTB43O43298 467 aa14.43□□□□□ -0.1
TP53-219ENST00000610538 POLR3DP05423 398 aaPredicted RBP14.43□□□□□ -0.1
TP53-219ENST00000610538 PDCP20941 246 aa14.43□□□□□ -0.1
TP53-219ENST00000610538 WTAPQ15007 396 aa14.43□□□□□ -0.1
TP53-219ENST00000610538 GIMAP6Q6P9H5 292 aa14.43□□□□□ -0.1
TP53-219ENST00000610538 SMARCC2Q8TAQ2 1214 aa14.43□□□□□ -0.1
TP53-219ENST00000610538 SLC16A10Q8TF71 515 aa14.43□□□□□ -0.1
TP53-219ENST00000610538 MKRN1Q9UHC7 482 aaKnown RBP14.43□□□□□ -0.1
TP53-219ENST00000610538 PPIP5K2O43314 1243 aa14.42□□□□□ -0.1
TP53-219ENST00000610538 FIBPO43427 364 aa14.42□□□□□ -0.1
TP53-219ENST00000610538 PPP4CP60510 307 aa14.42□□□□□ -0.1
TP53-219ENST00000610538 SART3Q15020 963 aaKnown RBP14.42□□□□□ -0.1
TP53-219ENST00000610538 PODNQ7Z5L7 613 aa14.42□□□□□ -0.1
TP53-219ENST00000610538 ZNF277Q9NRM2 450 aaPredicted RBP14.42□□□□□ -0.1
TP53-219ENST00000610538 TNKSO95271 1327 aa14.42□□□□□ -0.1
TP53-219ENST00000610538 RBM5P52756 815 aaKnown RBP eCLIP14.42□□□□□ -0.1
TP53-219ENST00000610538 RHBDL3P58872 404 aa14.42□□□□□ -0.1
TP53-219ENST00000610538 USP48Q86UV5 1035 aa14.42□□□□□ -0.1
TP53-219ENST00000610538 AIFM3Q96NN9 605 aa14.42□□□□□ -0.1
TP53-219ENST00000610538 TFIP11Q9UBB9 837 aaKnown RBP14.42□□□□□ -0.1
TP53-219ENST00000610538 LRRC37AA6NMS7 1700 aa14.42□□□□□ -0.1
TP53-219ENST00000610538 LTBP1Q14766 1721 aa14.42□□□□□ -0.1
TP53-219ENST00000610538 GADD45BO75293 160 aaPredicted RBP14.41□□□□□ -0.1
TP53-219ENST00000610538 C12orf60Q5U649 245 aa14.41□□□□□ -0.1
TP53-219ENST00000610538 LLPHQ9BRT6 129 aaKnown RBP14.41□□□□□ -0.1
TP53-219ENST00000610538 ORC3Q9UBD5 711 aaPredicted RBP14.41□□□□□ -0.1
TP53-219ENST00000610538 WDR19Q8NEZ3 1342 aa14.41□□□□□ -0.1
TP53-219ENST00000610538 CACNB3P54284 484 aa14.41□□□□□ -0.1
TP53-219ENST00000610538 CCDC125Q86Z20 511 aa14.41□□□□□ -0.1
TP53-219ENST00000610538 ENAHQ8N8S7 591 aaPredicted RBP14.41□□□□□ -0.1
TP53-219ENST00000610538 MKNK2Q9HBH9 465 aa14.41□□□□□ -0.1
TP53-219ENST00000610538 ARPP21Q9UBL0 812 aaPredicted RBP14.41□□□□□ -0.1
TP53-219ENST00000610538 TSPY2A6NKD2 308 aa14.4□□□□□ -0.1
TP53-219ENST00000610538 GOLGA8AA7E2F4 631 aa14.4□□□□□ -0.1
TP53-219ENST00000610538 DHX16O60231 1041 aaKnown RBP14.4□□□□□ -0.1
TP53-219ENST00000610538 SLURP2P0DP57 97 aa14.4□□□□□ -0.1
TP53-219ENST00000610538 LIFRP42702 1097 aa14.4□□□□□ -0.1
TP53-219ENST00000610538 SYNE3Q6ZMZ3 975 aa14.4□□□□□ -0.1
TP53-219ENST00000610538 SGMS1Q86VZ5 419 aa14.4□□□□□ -0.1
TP53-219ENST00000610538 ZSCAN10Q96SZ4 725 aaPredicted RBP14.4□□□□□ -0.1
TP53-219ENST00000610538 FAM217BQ9NTX9 383 aaPredicted RBP14.4□□□□□ -0.1
TP53-219ENST00000610538 MTMR7Q9Y216 660 aa14.4□□□□□ -0.1
TP53-219ENST00000610538 CEBPZQ03701 1054 aaKnown RBP14.4□□□□□ -0.1
TP53-219ENST00000610538 IQCA1Q86XH1 822 aa14.4□□□□□ -0.1
TP53-219ENST00000610538 SLF2Q8IX21 1173 aa14.4□□□□□ -0.1
TP53-219ENST00000610538 GPT2Q8TD30 523 aa14.4□□□□□ -0.1
TP53-219ENST00000610538 YDJCA8MPS7 323 aa14.39□□□□□ -0.11
TP53-219ENST00000610538 RAD17O75943 681 aa14.39□□□□□ -0.11
TP53-219ENST00000610538 FLT1P17948 1338 aa14.39□□□□□ -0.11
TP53-219ENST00000610538 HMGN5P82970 282 aaKnown RBP14.39□□□□□ -0.11
TP53-219ENST00000610538 TFAP4Q01664 338 aa14.39□□□□□ -0.11
TP53-219ENST00000610538 PDE4BQ07343 736 aa14.39□□□□□ -0.11
TP53-219ENST00000610538 FAM163AQ96GL9 167 aaPredicted RBP14.39□□□□□ -0.11
TP53-219ENST00000610538 USP40Q9NVE5 1235 aa14.39□□□□□ -0.11
TP53-219ENST00000610538 SLC3A2P08195 630 aaKnown RBP14.39□□□□□ -0.11
TP53-219ENST00000610538 KIAA2012Q0VF49 1180 aa14.39□□□□□ -0.11
TP53-219ENST00000610538 SBK1Q52WX2 424 aa14.39□□□□□ -0.11
TP53-219ENST00000610538 IFIT1BQ5T764 474 aaKnown RBP14.39□□□□□ -0.11
TP53-219ENST00000610538 CAVIN1Q6NZI2 390 aaKnown RBP14.39□□□□□ -0.11
TP53-219ENST00000610538 DDX4Q9NQI0 724 aaKnown RBP14.39□□□□□ -0.11
TP53-219ENST00000610538 RBM27Q9P2N5 1060 aaKnown RBP14.39□□□□□ -0.11
TP53-219ENST00000610538 GAKO14976 1311 aa14.38□□□□□ -0.11
TP53-219ENST00000610538 USP17L3A6NCW0 530 aa14.38□□□□□ -0.11
TP53-219ENST00000610538 USP17L4A6NCW7 530 aa14.38□□□□□ -0.11
TP53-219ENST00000610538 POLD1P28340 1107 aa14.38□□□□□ -0.11
TP53-219ENST00000610538 SEC23AQ15436 765 aa14.38□□□□□ -0.11
TP53-219ENST00000610538 DACT2Q5SW24 774 aa14.38□□□□□ -0.11
TP53-219ENST00000610538 USP17L1Q7RTZ2 530 aa14.38□□□□□ -0.11
TP53-219ENST00000610538 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.38□□□□□ -0.11
TP53-219ENST00000610538 C10orf71Q711Q0 1435 aa14.38□□□□□ -0.11
TP53-219ENST00000610538 BAZ2BQ9UIF8 2168 aaKnown RBP14.38□□□□□ -0.11
TP53-219ENST00000610538 hCG_1642624A0A1W2PR95 340 aa14.38□□□□□ -0.11
TP53-219ENST00000610538 TCP10Q12799 353 aa14.38□□□□□ -0.11
TP53-219ENST00000610538 APOBEC3HQ6NTF7 200 aaKnown RBP14.38□□□□□ -0.11
TP53-219ENST00000610538 AMOTL1Q8IY63 956 aa14.38□□□□□ -0.11
TP53-219ENST00000610538 ZNF654Q8IZM8 581 aa14.38□□□□□ -0.11
TP53-219ENST00000610538 LARGE2Q8N3Y3 721 aa14.38□□□□□ -0.11
TP53-219ENST00000610538 TEKT1Q969V4 418 aa14.38□□□□□ -0.11
TP53-219ENST00000610538 MTFR1LQ9H019 292 aa14.38□□□□□ -0.11
TP53-219ENST00000610538 ATP6V1DQ9Y5K8 247 aa14.38□□□□□ -0.11
TP53-219ENST00000610538 FGRP09769 529 aa14.37□□□□□ -0.11
TP53-219ENST00000610538 CRKP46108 304 aa14.37□□□□□ -0.11
TP53-219ENST00000610538 NFIAQ12857 509 aa14.37□□□□□ -0.11
TP53-219ENST00000610538 CCDC93Q567U6 631 aa14.37□□□□□ -0.11
TP53-219ENST00000610538 STRIP1Q5VSL9 837 aa14.37□□□□□ -0.11
TP53-219ENST00000610538 SLC26A6Q9BXS9 759 aa14.37□□□□□ -0.11
TP53-219ENST00000610538 ZBTB12Q9Y330 459 aaPredicted RBP14.37□□□□□ -0.11
TP53-219ENST00000610538 PLCG2P16885 1265 aa14.37□□□□□ -0.11
TP53-219ENST00000610538 NTRK3Q16288 839 aa14.37□□□□□ -0.11
TP53-219ENST00000610538 CDC42EP5Q6NZY7 148 aa14.37□□□□□ -0.11
TP53-219ENST00000610538 TMED8Q6PL24 325 aaPredicted RBP14.37□□□□□ -0.11
TP53-219ENST00000610538 ZFPM1Q8IX07 1006 aa14.37□□□□□ -0.11
TP53-219ENST00000610538 FANCBQ8NB91 859 aa14.37□□□□□ -0.11
TP53-219ENST00000610538 UPF1Q92900 1129 aaKnown RBP eCLIP14.37□□□□□ -0.118e-7■■■□□ 18.8
TP53-219ENST00000610538 C8orf76Q96K31 380 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms