RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 CFAP45Q9UL16 551 aa8.89□□□□□ -0.99
LMBR1-221ENST00000609774 KIAA0100Q14667 2235 aaKnown RBP8.88□□□□□ -0.99
LMBR1-221ENST00000609774 TCHHQ07283 1943 aa8.88□□□□□ -0.99
LMBR1-221ENST00000609774 PITPNM2Q9BZ72 1349 aa8.88□□□□□ -0.99
LMBR1-221ENST00000609774 SHTN1A0MZ66 631 aa8.88□□□□□ -0.99
LMBR1-221ENST00000609774 GOLGA6L19H0YKK7 550 aa8.88□□□□□ -0.99
LMBR1-221ENST00000609774 HRO43593 1189 aa8.88□□□□□ -0.99
LMBR1-221ENST00000609774 FXR1P51114 621 aaKnown RBP eCLIP8.88□□□□□ -0.99
LMBR1-221ENST00000609774 DNM1Q05193 864 aaKnown RBP8.88□□□□□ -0.99
LMBR1-221ENST00000609774 TYRO3Q06418 890 aa8.88□□□□□ -0.99
LMBR1-221ENST00000609774 MTX1Q13505 466 aa8.88□□□□□ -0.99
LMBR1-221ENST00000609774 GRAPQ13588 217 aa8.88□□□□□ -0.99
LMBR1-221ENST00000609774 ATL3Q6DD88 541 aa8.88□□□□□ -0.99
LMBR1-221ENST00000609774 BLOC1S2Q6QNY1 142 aa8.88□□□□□ -0.99
LMBR1-221ENST00000609774 CWC27Q6UX04 472 aaKnown RBP8.88□□□□□ -0.99
LMBR1-221ENST00000609774 KIF6Q6ZMV9 814 aa8.88□□□□□ -0.99
LMBR1-221ENST00000609774 TTLL7Q6ZT98 887 aa8.88□□□□□ -0.99
LMBR1-221ENST00000609774 SAMD7Q7Z3H4 446 aa8.88□□□□□ -0.99
LMBR1-221ENST00000609774 CCDC112Q8NEF3 446 aa8.88□□□□□ -0.99
LMBR1-221ENST00000609774 GRAPLQ8TC17 118 aaPredicted RBP8.88□□□□□ -0.99
LMBR1-221ENST00000609774 DNAAF4Q8WXU2 420 aa8.88□□□□□ -0.99
LMBR1-221ENST00000609774 CHAMP1Q96JM3 812 aa8.88□□□□□ -0.99
LMBR1-221ENST00000609774 SPATA32Q96LK8 384 aa8.88□□□□□ -0.99
LMBR1-221ENST00000609774 ZNF830Q96NB3 372 aaPredicted RBP8.88□□□□□ -0.99
LMBR1-221ENST00000609774 ZSCAN16Q9H4T2 348 aaPredicted RBP8.88□□□□□ -0.99
LMBR1-221ENST00000609774 MIS18AQ9NYP9 233 aa8.88□□□□□ -0.99
LMBR1-221ENST00000609774 SCN9AQ15858 1988 aa8.87□□□□□ -0.99
LMBR1-221ENST00000609774 GPR25O00155 361 aa8.87□□□□□ -0.99
LMBR1-221ENST00000609774 PSMD14O00487 310 aa8.87□□□□□ -0.99
LMBR1-221ENST00000609774 EGFRP00533 1210 aa8.87□□□□□ -0.99
LMBR1-221ENST00000609774 VIL1P09327 827 aaKnown RBP8.87□□□□□ -0.99
LMBR1-221ENST00000609774 ZNF280AP59817 542 aaPredicted RBP8.87□□□□□ -0.99
LMBR1-221ENST00000609774 EIF4A1P60842 406 aaKnown RBP8.87□□□□□ -0.99
LMBR1-221ENST00000609774 TDRD7Q8NHU6 1098 aaKnown RBP8.87□□□□□ -0.99
LMBR1-221ENST00000609774 UTP14AQ9BVJ6 771 aaKnown RBP8.87□□□□□ -0.99
LMBR1-221ENST00000609774 TRIM5Q9C035 493 aa8.87□□□□□ -0.99
LMBR1-221ENST00000609774 CLSTN2Q9H4D0 955 aa8.87□□□□□ -0.99
LMBR1-221ENST00000609774 TAF1P21675 1872 aa8.86□□□□□ -0.99
LMBR1-221ENST00000609774 ZSCAN20P17040 1043 aaPredicted RBP8.86□□□□□ -0.99
LMBR1-221ENST00000609774 GPTP24298 496 aa8.86□□□□□ -0.99
LMBR1-221ENST00000609774 ZNF75DP51815 510 aa8.86□□□□□ -0.99
LMBR1-221ENST00000609774 CBX1P83916 185 aa8.86□□□□□ -0.99
LMBR1-221ENST00000609774 TPD52L1Q16890 204 aaPredicted RBP8.86□□□□□ -0.99
LMBR1-221ENST00000609774 DLK2Q6UY11 383 aa8.86□□□□□ -0.99
LMBR1-221ENST00000609774 RBM43Q6ZSC3 357 aaKnown RBP8.86□□□□□ -0.99
LMBR1-221ENST00000609774 TICAM2Q86XR7 235 aa8.86□□□□□ -0.99
LMBR1-221ENST00000609774 SULF1Q8IWU6 871 aa8.86□□□□□ -0.99
LMBR1-221ENST00000609774 SPC24Q8NBT2 197 aa8.86□□□□□ -0.99
LMBR1-221ENST00000609774 CDCA5Q96FF9 252 aa8.86□□□□□ -0.99
LMBR1-221ENST00000609774 NAT10Q9H0A0 1025 aaKnown RBP8.86□□□□□ -0.99
LMBR1-221ENST00000609774 SNRKQ9NRH2 765 aa8.86□□□□□ -0.99
LMBR1-221ENST00000609774 PLA2G2EQ9NZK7 142 aa8.86□□□□□ -0.99
LMBR1-221ENST00000609774 RTL9Q8NET4 1388 aa8.86□□□□□ -0.99
LMBR1-221ENST00000609774 CCDC66A2RUB6 948 aa8.85□□□□□ -0.99
LMBR1-221ENST00000609774 ADM5C9JUS6 153 aa8.85□□□□□ -0.99
LMBR1-221ENST00000609774 CCP110O43303 1012 aa8.85□□□□□ -0.99
LMBR1-221ENST00000609774 DDX58O95786 925 aaKnown RBP8.85□□□□□ -0.99
LMBR1-221ENST00000609774 TNNT1P13805 278 aa8.85□□□□□ -0.99
LMBR1-221ENST00000609774 GSDMDP57764 484 aa8.85□□□□□ -0.99
LMBR1-221ENST00000609774 TPM4P67936 248 aa8.85□□□□□ -0.99
LMBR1-221ENST00000609774 G3BP1Q13283 466 aaKnown RBP eCLIP8.85□□□□□ -0.99
LMBR1-221ENST00000609774 PDIA6Q15084 440 aa8.85□□□□□ -0.99
LMBR1-221ENST00000609774 NECTIN1Q15223 517 aa8.85□□□□□ -0.99
LMBR1-221ENST00000609774 WASHC4Q2M389 1173 aa8.85□□□□□ -0.99
LMBR1-221ENST00000609774 KIF4BQ2VIQ3 1234 aa8.85□□□□□ -0.99
LMBR1-221ENST00000609774 TSGA10IPQ3SY00 556 aa8.85□□□□□ -0.99
LMBR1-221ENST00000609774 TBC1D10BQ4KMP7 808 aaPredicted RBP8.85□□□□□ -0.99
LMBR1-221ENST00000609774 HSP90AB3PQ58FF7 597 aa8.85□□□□□ -0.99
LMBR1-221ENST00000609774 CREB3L3Q68CJ9 461 aa8.85□□□□□ -0.99
LMBR1-221ENST00000609774 SARM1Q6SZW1 724 aa8.85□□□□□ -0.99
LMBR1-221ENST00000609774 DDX46Q7L014 1031 aaKnown RBP8.85□□□□□ -0.99
LMBR1-221ENST00000609774 CCDC186Q7Z3E2 898 aa8.85□□□□□ -0.99
LMBR1-221ENST00000609774 PLA2G4DQ86XP0 818 aa8.85□□□□□ -0.99
LMBR1-221ENST00000609774 AGBL3Q8NEM8 1001 aa8.85□□□□□ -0.99
LMBR1-221ENST00000609774 BICD2Q8TD16 824 aa8.85□□□□□ -0.99
LMBR1-221ENST00000609774 LLPHQ9BRT6 129 aaKnown RBP8.85□□□□□ -0.99
LMBR1-221ENST00000609774 C9orf78Q9NZ63 289 aaPredicted RBP8.85□□□□□ -0.99
LMBR1-221ENST00000609774 HDAC9Q9UKV0 1011 aa8.85□□□□□ -0.99
LMBR1-221ENST00000609774 PYCARDQ9ULZ3 195 aa8.85□□□□□ -0.99
LMBR1-221ENST00000609774 RBM8AQ9Y5S9 174 aaKnown RBP8.85□□□□□ -0.99
LMBR1-221ENST00000609774 MRVI1Q9Y6F6 885 aa8.85□□□□□ -0.99
LMBR1-221ENST00000609774 RFX7Q2KHR2 1363 aa8.85□□□□□ -0.99
LMBR1-221ENST00000609774 HTTP42858 3142 aa8.84□□□□□ -0.99
LMBR1-221ENST00000609774 MKI67P46013 3256 aaKnown RBP8.84□□□□□ -0.99
LMBR1-221ENST00000609774 H3BQV1 296 aa8.84□□□□□ -0.99
LMBR1-221ENST00000609774 MAP4K4O95819 1239 aaPredicted RBP8.84□□□□□ -0.99
LMBR1-221ENST00000609774 HMGB1P09429 215 aaKnown RBP8.84□□□□□ -0.99
LMBR1-221ENST00000609774 PTGS1P23219 599 aa8.84□□□□□ -0.99
LMBR1-221ENST00000609774 RPS6KB1P23443 525 aa8.84□□□□□ -0.99
LMBR1-221ENST00000609774 ZNF165P49910 485 aa8.84□□□□□ -0.99
LMBR1-221ENST00000609774 MMP14P50281 582 aa8.84□□□□□ -0.99
LMBR1-221ENST00000609774 SF3B3Q15393 1217 aaKnown RBP8.84□□□□□ -0.99
LMBR1-221ENST00000609774 ZRSR1Q15695 479 aaKnown RBP8.84□□□□□ -0.99
LMBR1-221ENST00000609774 STX1AQ16623 288 aa8.84□□□□□ -0.99
LMBR1-221ENST00000609774 ANO6Q4KMQ2 910 aa8.84□□□□□ -0.99
LMBR1-221ENST00000609774 BEND3Q5T5X7 828 aa8.84□□□□□ -0.99
LMBR1-221ENST00000609774 ZSCAN25Q6NSZ9 544 aa8.84□□□□□ -0.99
LMBR1-221ENST00000609774 NLRP10Q86W26 655 aa8.84□□□□□ -0.99
LMBR1-221ENST00000609774 MAP4K1Q92918 833 aa8.84□□□□□ -0.99
LMBR1-221ENST00000609774 MRFAP1L1Q96HT8 127 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms