RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 PHKBQ93100 1093 aa13.32□□□□□ -0.28
LINC01278-204ENST00000609143 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.32□□□□□ -0.28
LINC01278-204ENST00000609143 IFNAR1P17181 557 aa13.32□□□□□ -0.28
LINC01278-204ENST00000609143 TRIM29Q14134 588 aa13.32□□□□□ -0.28
LINC01278-204ENST00000609143 PPP2R5BQ15173 497 aa13.32□□□□□ -0.28
LINC01278-204ENST00000609143 DIXDC1Q155Q3 683 aa13.32□□□□□ -0.28
LINC01278-204ENST00000609143 OTUD7BQ6GQQ9 843 aa13.32□□□□□ -0.28
LINC01278-204ENST00000609143 SLF2Q8IX21 1173 aa13.32□□□□□ -0.28
LINC01278-204ENST00000609143 AMOTL1Q8IY63 956 aa13.32□□□□□ -0.28
LINC01278-204ENST00000609143 MCM9Q9NXL9 1143 aa13.32□□□□□ -0.28
LINC01278-204ENST00000609143 RCOR1Q9UKL0 485 aa13.32□□□□□ -0.28
LINC01278-204ENST00000609143 MYH2Q9UKX2 1941 aa13.31□□□□□ -0.28
LINC01278-204ENST00000609143 SMIM22K7EJ46 135 aa13.31□□□□□ -0.28
LINC01278-204ENST00000609143 PRDM1O75626 825 aa13.31□□□□□ -0.28
LINC01278-204ENST00000609143 NT5C2P49902 561 aa13.31□□□□□ -0.28
LINC01278-204ENST00000609143 ILDR1Q86SU0 546 aaPredicted RBP13.31□□□□□ -0.28
LINC01278-204ENST00000609143 TRIM22Q8IYM9 498 aa13.31□□□□□ -0.28
LINC01278-204ENST00000609143 BICD2Q8TD16 824 aa13.31□□□□□ -0.28
LINC01278-204ENST00000609143 MASTLQ96GX5 879 aa13.31□□□□□ -0.28
LINC01278-204ENST00000609143 USP28Q96RU2 1077 aa13.31□□□□□ -0.28
LINC01278-204ENST00000609143 FMNL1O95466 1100 aaPredicted RBP13.31□□□□□ -0.28
LINC01278-204ENST00000609143 CEBPZQ03701 1054 aaKnown RBP13.31□□□□□ -0.28
LINC01278-204ENST00000609143 GRIK5Q16478 980 aa13.31□□□□□ -0.28
LINC01278-204ENST00000609143 MFSD14BQ5SR56 506 aa13.31□□□□□ -0.28
LINC01278-204ENST00000609143 MSL1Q68DK7 614 aa13.31□□□□□ -0.28
LINC01278-204ENST00000609143 MPNDQ8N594 471 aa13.31□□□□□ -0.28
LINC01278-204ENST00000609143 ENAHQ8N8S7 591 aaPredicted RBP13.31□□□□□ -0.28
LINC01278-204ENST00000609143 SH3RF3Q8TEJ3 882 aaPredicted RBP13.31□□□□□ -0.28
LINC01278-204ENST00000609143 SLC26A6Q9BXS9 759 aa13.31□□□□□ -0.28
LINC01278-204ENST00000609143 COA1Q9GZY4 146 aa13.31□□□□□ -0.28
LINC01278-204ENST00000609143 FAM205AQ6ZU69 1335 aa13.3□□□□□ -0.28
LINC01278-204ENST00000609143 COL11A2P13942 1736 aaPredicted RBP13.3□□□□□ -0.28
LINC01278-204ENST00000609143 ECM29Q5VYK3 1845 aa13.3□□□□□ -0.28
LINC01278-204ENST00000609143 IFIT1BQ5T764 474 aaKnown RBP13.3□□□□□ -0.28
LINC01278-204ENST00000609143 FANCBQ8NB91 859 aa13.3□□□□□ -0.28
LINC01278-204ENST00000609143 NUP133Q8WUM0 1156 aa13.3□□□□□ -0.28
LINC01278-204ENST00000609143 CYP2D6P10635 497 aa13.3□□□□□ -0.28
LINC01278-204ENST00000609143 PLCG2P16885 1265 aa13.3□□□□□ -0.28
LINC01278-204ENST00000609143 KIF23Q02241 960 aaPredicted RBP13.3□□□□□ -0.28
LINC01278-204ENST00000609143 CATIPQ7Z7H3 387 aa13.3□□□□□ -0.28
LINC01278-204ENST00000609143 PGBD1Q96JS3 809 aa13.3□□□□□ -0.28
LINC01278-204ENST00000609143 ZC3H12CQ9C0D7 883 aaKnown RBP13.3□□□□□ -0.28
LINC01278-204ENST00000609143 DDX19AQ9NUU7 478 aaKnown RBP13.3□□□□□ -0.28
LINC01278-204ENST00000609143 DLEC1Q9Y238 1755 aa13.29□□□□□ -0.28
LINC01278-204ENST00000609143 LIG1P18858 919 aa13.29□□□□□ -0.28
LINC01278-204ENST00000609143 KRT40Q6A162 431 aa13.29□□□□□ -0.28
LINC01278-204ENST00000609143 DPP8Q6V1X1 898 aaPredicted RBP13.29□□□□□ -0.28
LINC01278-204ENST00000609143 RTFDC1Q9BY42 306 aaPredicted RBP13.29□□□□□ -0.28
LINC01278-204ENST00000609143 ZMYND15Q9H091 742 aa13.29□□□□□ -0.28
LINC01278-204ENST00000609143 NUP62CLQ9H1M0 184 aa13.29□□□□□ -0.28
LINC01278-204ENST00000609143 GJB4Q9NTQ9 266 aa13.29□□□□□ -0.28
LINC01278-204ENST00000609143 RTEL1Q9NZ71 1219 aa13.29□□□□□ -0.28
LINC01278-204ENST00000609143 MKRN1Q9UHC7 482 aaKnown RBP13.29□□□□□ -0.28
LINC01278-204ENST00000609143 NAV1Q8NEY1 1877 aa13.29□□□□□ -0.28
LINC01278-204ENST00000609143 USP17L8P0C7I0 530 aa13.29□□□□□ -0.28
LINC01278-204ENST00000609143 CALM1P0DP23 149 aa13.29□□□□□ -0.28
LINC01278-204ENST00000609143 CALM2P0DP24 149 aa13.29□□□□□ -0.28
LINC01278-204ENST00000609143 CALM3P0DP25 149 aa13.29□□□□□ -0.28
LINC01278-204ENST00000609143 BTDP43251 543 aa13.29□□□□□ -0.28
LINC01278-204ENST00000609143 GNL2Q13823 731 aaKnown RBP13.29□□□□□ -0.28
LINC01278-204ENST00000609143 C12orf60Q5U649 245 aa13.29□□□□□ -0.28
LINC01278-204ENST00000609143 MYSM1Q5VVJ2 828 aa13.29□□□□□ -0.28
LINC01278-204ENST00000609143 AIFM3Q96NN9 605 aa13.29□□□□□ -0.28
LINC01278-204ENST00000609143 GPR75-ASB3A0A0A6YYF3 556 aa13.28□□□□□ -0.28
LINC01278-204ENST00000609143 RIMBP2O15034 1052 aa13.28□□□□□ -0.28
LINC01278-204ENST00000609143 POLR3DP05423 398 aaPredicted RBP13.28□□□□□ -0.28
LINC01278-204ENST00000609143 CCDC173Q0VFZ6 552 aa13.28□□□□□ -0.28
LINC01278-204ENST00000609143 FTOQ9C0B1 505 aaKnown RBP eCLIP13.28□□□□□ -0.28
LINC01278-204ENST00000609143 STK32BQ9NY57 414 aa13.28□□□□□ -0.28
LINC01278-204ENST00000609143 RGS17Q9UGC6 210 aaPredicted RBP13.28□□□□□ -0.28
LINC01278-204ENST00000609143 ROBO3Q96MS0 1386 aa13.28□□□□□ -0.28
LINC01278-204ENST00000609143 TSPY2A6NKD2 308 aa13.28□□□□□ -0.28
LINC01278-204ENST00000609143 DEXIO95424 95 aa13.28□□□□□ -0.28
LINC01278-204ENST00000609143 POTEAQ6S8J7 498 aa13.28□□□□□ -0.28
LINC01278-204ENST00000609143 TGFBRAP1Q8WUH2 860 aa13.28□□□□□ -0.28
LINC01278-204ENST00000609143 FAM163AQ96GL9 167 aaPredicted RBP13.28□□□□□ -0.28
LINC01278-204ENST00000609143 DACT1Q9NYF0 836 aa13.28□□□□□ -0.28
LINC01278-204ENST00000609143 DDAH1O94760 285 aa13.27□□□□□ -0.28
LINC01278-204ENST00000609143 GTF2IP78347 998 aa13.27□□□□□ -0.28
LINC01278-204ENST00000609143 EVX2Q03828 476 aa13.27□□□□□ -0.28
LINC01278-204ENST00000609143 SLC15A2Q16348 729 aa13.27□□□□□ -0.28
LINC01278-204ENST00000609143 CRACR2BQ8N4Y2 399 aaPredicted RBP13.27□□□□□ -0.28
LINC01278-204ENST00000609143 ZNF622Q969S3 477 aaKnown RBP eCLIP13.27□□□□□ -0.28
LINC01278-204ENST00000609143 EYA3Q99504 573 aa13.27□□□□□ -0.28
LINC01278-204ENST00000609143 POLR3EQ9NVU0 708 aa13.27□□□□□ -0.28
LINC01278-204ENST00000609143 RBM28Q9NW13 759 aaKnown RBP13.27□□□□□ -0.28
LINC01278-204ENST00000609143 SUGT1Q9Y2Z0 365 aa13.27□□□□□ -0.28
LINC01278-204ENST00000609143 KIF28PB7ZC32 967 aa13.27□□□□□ -0.29
LINC01278-204ENST00000609143 YEATS4O95619 227 aa13.27□□□□□ -0.29
LINC01278-204ENST00000609143 ME1P48163 572 aa13.27□□□□□ -0.29
LINC01278-204ENST00000609143 STK38Q15208 465 aa13.27□□□□□ -0.29
LINC01278-204ENST00000609143 MAP3K11Q16584 847 aa13.27□□□□□ -0.29
LINC01278-204ENST00000609143 C2CD5Q86YS7 1000 aa13.27□□□□□ -0.29
LINC01278-204ENST00000609143 TEX11Q8IYF3 940 aa13.27□□□□□ -0.29
LINC01278-204ENST00000609143 KCNG4Q8TDN1 519 aa13.27□□□□□ -0.29
LINC01278-204ENST00000609143 GAKO14976 1311 aa13.27□□□□□ -0.29
LINC01278-204ENST00000609143 H0YIN7 160 aa13.26□□□□□ -0.29
LINC01278-204ENST00000609143 AKAP17AQ02040 695 aaKnown RBP13.26□□□□□ -0.29
LINC01278-204ENST00000609143 SAFBQ15424 915 aaKnown RBP eCLIP13.26□□□□□ -0.29
LINC01278-204ENST00000609143 STYK1Q6J9G0 422 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms