RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 TAF1CQ15572 869 aaPredicted RBP14.02□□□□□ -0.17
LINC00539-204ENST00000608957 OTUD7BQ6GQQ9 843 aa14.02□□□□□ -0.17
LINC00539-204ENST00000608957 MAPKAPK5Q8IW41 473 aa14.02□□□□□ -0.17
LINC00539-204ENST00000608957 SCYL3Q8IZE3 742 aa14.02□□□□□ -0.17
LINC00539-204ENST00000608957 MAGEB6Q8N7X4 407 aa14.02□□□□□ -0.17
LINC00539-204ENST00000608957 CD99L2Q8TCZ2 262 aa14.02□□□□□ -0.17
LINC00539-204ENST00000608957 TGFBRAP1Q8WUH2 860 aa14.02□□□□□ -0.17
LINC00539-204ENST00000608957 BCL11AQ9H165 835 aa14.02□□□□□ -0.17
LINC00539-204ENST00000608957 DOCK3Q8IZD9 2030 aa14.02□□□□□ -0.17
LINC00539-204ENST00000608957 PTPRAP18433 802 aa14.01□□□□□ -0.17
LINC00539-204ENST00000608957 MIGA1Q8NAN2 632 aa14.01□□□□□ -0.17
LINC00539-204ENST00000608957 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.01□□□□□ -0.17
LINC00539-204ENST00000608957 DCTPP1Q9H773 170 aa14.01□□□□□ -0.17
LINC00539-204ENST00000608957 DNAJC18Q9H819 358 aa14.01□□□□□ -0.17
LINC00539-204ENST00000608957 HPS5Q9UPZ3 1129 aa14.01□□□□□ -0.17
LINC00539-204ENST00000608957 MYH8P13535 1937 aa14.01□□□□□ -0.17
LINC00539-204ENST00000608957 ADGRA2Q96PE1 1338 aa14□□□□□ -0.17
LINC00539-204ENST00000608957 CTNND1O60716 968 aaKnown RBP14□□□□□ -0.17
LINC00539-204ENST00000608957 IGSF3O75054 1194 aa14□□□□□ -0.17
LINC00539-204ENST00000608957 BAG3O95817 575 aa14□□□□□ -0.17
LINC00539-204ENST00000608957 IFIT2P09913 472 aaKnown RBP14□□□□□ -0.17
LINC00539-204ENST00000608957 PLCG2P16885 1265 aa14□□□□□ -0.17
LINC00539-204ENST00000608957 NUCB1Q02818 461 aa14□□□□□ -0.17
LINC00539-204ENST00000608957 SHROOM1Q2M3G4 852 aaPredicted RBP14□□□□□ -0.17
LINC00539-204ENST00000608957 SLFNL1Q499Z3 407 aa14□□□□□ -0.17
LINC00539-204ENST00000608957 GPAT2Q6NUI2 795 aa14□□□□□ -0.17
LINC00539-204ENST00000608957 OTOP1Q7RTM1 612 aa14□□□□□ -0.17
LINC00539-204ENST00000608957 SKAP1Q86WV1 359 aa14□□□□□ -0.17
LINC00539-204ENST00000608957 NOL10Q9BSC4 688 aaKnown RBP14□□□□□ -0.17
LINC00539-204ENST00000608957 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14□□□□□ -0.17
LINC00539-204ENST00000608957 AFG3L2Q9Y4W6 797 aa14□□□□□ -0.17
LINC00539-204ENST00000608957 TCRBV5S4A2TA0A5A2 114 aa13.99□□□□□ -0.17
LINC00539-204ENST00000608957 GOLIM4O00461 696 aa13.99□□□□□ -0.17
LINC00539-204ENST00000608957 CHGBP05060 677 aa13.99□□□□□ -0.17
LINC00539-204ENST00000608957 JAG1P78504 1218 aa13.99□□□□□ -0.17
LINC00539-204ENST00000608957 ANKRD23Q86SG2 305 aa13.99□□□□□ -0.17
LINC00539-204ENST00000608957 METTL16Q86W50 562 aaKnown RBP13.99□□□□□ -0.17
LINC00539-204ENST00000608957 DNAJC2Q99543 621 aaKnown RBP13.99□□□□□ -0.17
LINC00539-204ENST00000608957 RIOK1Q9BRS2 568 aaKnown RBP13.99□□□□□ -0.17
LINC00539-204ENST00000608957 BOLA2Q9H3K6 86 aa13.99□□□□□ -0.17
LINC00539-204ENST00000608957 ZFYVE28Q9HCC9 887 aa13.99□□□□□ -0.17
LINC00539-204ENST00000608957 ZCCHC17Q9NP64 241 aaKnown RBP13.99□□□□□ -0.17
LINC00539-204ENST00000608957 SAP30BPQ9UHR5 308 aaKnown RBP13.99□□□□□ -0.17
LINC00539-204ENST00000608957 PALD1Q9ULE6 856 aa13.99□□□□□ -0.17
LINC00539-204ENST00000608957 ZHX2Q9Y6X8 837 aa13.99□□□□□ -0.17
LINC00539-204ENST00000608957 HTTP42858 3142 aa13.98□□□□□ -0.17
LINC00539-204ENST00000608957 A0A0G2JLL6 359 aaPredicted RBP13.98□□□□□ -0.17
LINC00539-204ENST00000608957 CXCL11O14625 94 aa13.98□□□□□ -0.17
LINC00539-204ENST00000608957 TLR2O60603 784 aa13.98□□□□□ -0.17
LINC00539-204ENST00000608957 PDE6AP16499 860 aa13.98□□□□□ -0.17
LINC00539-204ENST00000608957 ATP5JP18859 108 aa13.98□□□□□ -0.17
LINC00539-204ENST00000608957 SP3Q02447 781 aa13.98□□□□□ -0.17
LINC00539-204ENST00000608957 MAP3K12Q12852 859 aa13.98□□□□□ -0.17
LINC00539-204ENST00000608957 PKN2Q16513 984 aaKnown RBP13.98□□□□□ -0.17
LINC00539-204ENST00000608957 SLC4A8Q2Y0W8 1093 aa13.98□□□□□ -0.17
LINC00539-204ENST00000608957 FBXO46Q6PJ61 603 aaPredicted RBP13.98□□□□□ -0.17
LINC00539-204ENST00000608957 PRRT2Q7Z6L0 340 aaPredicted RBP13.98□□□□□ -0.17
LINC00539-204ENST00000608957 LRRCC1Q9C099 1032 aa13.98□□□□□ -0.17
LINC00539-204ENST00000608957 PICK1Q9NRD5 415 aa13.98□□□□□ -0.17
LINC00539-204ENST00000608957 TRIM17Q9Y577 477 aa13.98□□□□□ -0.17
LINC00539-204ENST00000608957 RBBP6Q7Z6E9 1792 aaKnown RBP13.97□□□□□ -0.17
LINC00539-204ENST00000608957 PDHXO00330 501 aa13.97□□□□□ -0.17
LINC00539-204ENST00000608957 CTGFP29279 349 aa13.97□□□□□ -0.17
LINC00539-204ENST00000608957 CAP2P40123 477 aa13.97□□□□□ -0.17
LINC00539-204ENST00000608957 RGS19P49795 217 aa13.97□□□□□ -0.17
LINC00539-204ENST00000608957 ANKRD45Q5TZF3 282 aa13.97□□□□□ -0.17
LINC00539-204ENST00000608957 C17orf99Q6UX52 265 aa13.97□□□□□ -0.17
LINC00539-204ENST00000608957 CHD1LQ86WJ1 897 aa13.97□□□□□ -0.17
LINC00539-204ENST00000608957 ERO1AQ96HE7 468 aa13.97□□□□□ -0.17
LINC00539-204ENST00000608957 ARHGAP39Q9C0H5 1083 aa13.97□□□□□ -0.17
LINC00539-204ENST00000608957 DHX36Q9H2U1 1008 aaKnown RBP13.97□□□□□ -0.17
LINC00539-204ENST00000608957 PI4KBQ9UBF8 816 aa13.97□□□□□ -0.17
LINC00539-204ENST00000608957 ZNF532Q9HCE3 1301 aa13.96□□□□□ -0.17
LINC00539-204ENST00000608957 EVX2Q03828 476 aa13.96□□□□□ -0.17
LINC00539-204ENST00000608957 TTF1Q15361 905 aaPredicted RBP13.96□□□□□ -0.17
LINC00539-204ENST00000608957 SLC9C2Q5TAH2 1124 aa13.96□□□□□ -0.17
LINC00539-204ENST00000608957 HAUS7Q99871 368 aa13.96□□□□□ -0.17
LINC00539-204ENST00000608957 LNPKQ9C0E8 428 aa13.96□□□□□ -0.17
LINC00539-204ENST00000608957 PAG1Q9NWQ8 432 aa13.96□□□□□ -0.17
LINC00539-204ENST00000608957 CPA4Q9UI42 421 aa13.96□□□□□ -0.17
LINC00539-204ENST00000608957 HERC5Q9UII4 1024 aaKnown RBP13.96□□□□□ -0.17
LINC00539-204ENST00000608957 TRIM75PA6NK02 468 aa13.95□□□□□ -0.18
LINC00539-204ENST00000608957 PDE4AP27815 886 aa13.95□□□□□ -0.18
LINC00539-204ENST00000608957 ADD2P35612 726 aa13.95□□□□□ -0.18
LINC00539-204ENST00000608957 SOX10P56693 466 aa13.95□□□□□ -0.18
LINC00539-204ENST00000608957 TSHZ3Q63HK5 1081 aa13.95□□□□□ -0.18
LINC00539-204ENST00000608957 GADL1Q6ZQY3 521 aa13.95□□□□□ -0.18
LINC00539-204ENST00000608957 ZBTB47Q9UFB7 747 aaPredicted RBP13.95□□□□□ -0.18
LINC00539-204ENST00000608957 PTPN22Q9Y2R2 807 aa13.95□□□□□ -0.18
LINC00539-204ENST00000608957 KIAA0100Q14667 2235 aaKnown RBP13.95□□□□□ -0.18
LINC00539-204ENST00000608957 MAGEB6P1A0A0J9YX57 407 aa13.94□□□□□ -0.18
LINC00539-204ENST00000608957 GDF11O95390 407 aa13.94□□□□□ -0.18
LINC00539-204ENST00000608957 CYP2C8P10632 490 aa13.94□□□□□ -0.18
LINC00539-204ENST00000608957 USP5P45974 858 aa13.94□□□□□ -0.18
LINC00539-204ENST00000608957 LACTBP83111 547 aaPredicted RBP13.94□□□□□ -0.18
LINC00539-204ENST00000608957 TREML2Q5T2D2 321 aa13.94□□□□□ -0.18
LINC00539-204ENST00000608957 TMED8Q6PL24 325 aaPredicted RBP13.94□□□□□ -0.18
LINC00539-204ENST00000608957 FOXP4Q8IVH2 680 aaPredicted RBP13.94□□□□□ -0.18
LINC00539-204ENST00000608957 LCORLQ8N3X6 602 aa13.94□□□□□ -0.18
LINC00539-204ENST00000608957 EFCC1Q9HA90 598 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms