RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 UBR3Q6ZT12 1888 aa23.02■■□□□ 1.28
MMP28-201ENST00000605424 KIAA1551Q9HCM1 1747 aa23.02■■□□□ 1.28
MMP28-201ENST00000605424 GNL2Q13823 731 aaKnown RBP23.02■■□□□ 1.28
MMP28-201ENST00000605424 SLC39A14Q15043 492 aa23.02■■□□□ 1.28
MMP28-201ENST00000605424 CTR9Q6PD62 1173 aa23.02■■□□□ 1.28
MMP28-201ENST00000605424 FMR1NBQ8N0W7 255 aaPredicted RBP23.02■■□□□ 1.28
MMP28-201ENST00000605424 DEXIO95424 95 aa23.01■■□□□ 1.27
MMP28-201ENST00000605424 SBK1Q52WX2 424 aa23.01■■□□□ 1.27
MMP28-201ENST00000605424 PRR5LQ6MZQ0 368 aa23.01■■□□□ 1.27
MMP28-201ENST00000605424 IQCA1Q86XH1 822 aa23.01■■□□□ 1.27
MMP28-201ENST00000605424 JMYQ8N9B5 988 aa23.01■■□□□ 1.27
MMP28-201ENST00000605424 AIFM3Q96NN9 605 aa23.01■■□□□ 1.27
MMP28-201ENST00000605424 ZSCAN10Q96SZ4 725 aaPredicted RBP23.01■■□□□ 1.27
MMP28-201ENST00000605424 ZKSCAN3Q9BRR0 538 aa23.01■■□□□ 1.27
MMP28-201ENST00000605424 ANKIB1Q9P2G1 1089 aa23.01■■□□□ 1.27
MMP28-201ENST00000605424 TNKSO95271 1327 aa23.01■■□□□ 1.27
MMP28-201ENST00000605424 ECM29Q5VYK3 1845 aa23.01■■□□□ 1.27
MMP28-201ENST00000605424 ORC4O43929 436 aa23■■□□□ 1.27
MMP28-201ENST00000605424 PPP6R2O75170 966 aa23■■□□□ 1.27
MMP28-201ENST00000605424 SLC3A2P08195 630 aaKnown RBP23■■□□□ 1.27
MMP28-201ENST00000605424 CRACR2BQ8N4Y2 399 aaPredicted RBP23■■□□□ 1.27
MMP28-201ENST00000605424 EIF2AK3Q9NZJ5 1116 aaKnown RBP23■■□□□ 1.27
MMP28-201ENST00000605424 ARPP21Q9UBL0 812 aaPredicted RBP23■■□□□ 1.27
MMP28-201ENST00000605424 ST5P78524 1137 aa23■■□□□ 1.27
MMP28-201ENST00000605424 CHAF1AQ13111 956 aaPredicted RBP23■■□□□ 1.27
MMP28-201ENST00000605424 SAFBQ15424 915 aaKnown RBP eCLIP23■■□□□ 1.27
MMP28-201ENST00000605424 CRY2Q49AN0 593 aa23■■□□□ 1.27
MMP28-201ENST00000605424 NBPF11Q86T75 865 aa23■■□□□ 1.27
MMP28-201ENST00000605424 TDRD7Q8NHU6 1098 aaKnown RBP23■■□□□ 1.27
MMP28-201ENST00000605424 CBX8Q9HC52 389 aa23■■□□□ 1.27
MMP28-201ENST00000605424 CALM1P0DP23 149 aa22.99■■□□□ 1.27
MMP28-201ENST00000605424 CALM2P0DP24 149 aa22.99■■□□□ 1.27
MMP28-201ENST00000605424 CALM3P0DP25 149 aa22.99■■□□□ 1.27
MMP28-201ENST00000605424 GYS1P13807 737 aa22.99■■□□□ 1.27
MMP28-201ENST00000605424 CMA1P23946 247 aa22.99■■□□□ 1.27
MMP28-201ENST00000605424 PRDX5P30044 214 aa22.99■■□□□ 1.27
MMP28-201ENST00000605424 TXNRD3Q86VQ6 643 aa22.99■■□□□ 1.27
MMP28-201ENST00000605424 RPGRQ92834 1020 aaKnown RBP22.99■■□□□ 1.27
MMP28-201ENST00000605424 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.99■■□□□ 1.27
MMP28-201ENST00000605424 DCP1AQ9NPI6 582 aaPredicted RBP22.99■■□□□ 1.27
MMP28-201ENST00000605424 USP17L12C9JPN9 530 aa22.98■■□□□ 1.27
MMP28-201ENST00000605424 USP17L21D6R901 530 aa22.98■■□□□ 1.27
MMP28-201ENST00000605424 ZNF165P49910 485 aa22.98■■□□□ 1.27
MMP28-201ENST00000605424 STX1AQ16623 288 aa22.98■■□□□ 1.27
MMP28-201ENST00000605424 ZNF804AQ7Z570 1209 aa22.98■■□□□ 1.27
MMP28-201ENST00000605424 AATFQ9NY61 560 aaKnown RBP eCLIP22.98■■□□□ 1.27
MMP28-201ENST00000605424 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.98■■□□□ 1.27
MMP28-201ENST00000605424 TPM3P06753 285 aa22.98■■□□□ 1.27
MMP28-201ENST00000605424 GSTO1P78417 241 aa22.98■■□□□ 1.27
MMP28-201ENST00000605424 DZIP1Q86YF9 867 aaKnown RBP22.98■■□□□ 1.27
MMP28-201ENST00000605424 RNF26Q9BY78 433 aaPredicted RBP22.98■■□□□ 1.27
MMP28-201ENST00000605424 RBM28Q9NW13 759 aaKnown RBP22.98■■□□□ 1.27
MMP28-201ENST00000605424 BAZ2AQ9UIF9 1905 aaKnown RBP22.97■■□□□ 1.27
MMP28-201ENST00000605424 MMP1P03956 469 aa22.97■■□□□ 1.27
MMP28-201ENST00000605424 DEFB132Q7Z7B7 95 aa22.97■■□□□ 1.27
MMP28-201ENST00000605424 CATIPQ7Z7H3 387 aa22.97■■□□□ 1.27
MMP28-201ENST00000605424 ENAHQ8N8S7 591 aaPredicted RBP22.97■■□□□ 1.27
MMP28-201ENST00000605424 RBM17Q96I25 401 aaKnown RBP22.97■■□□□ 1.27
MMP28-201ENST00000605424 FOXP1Q9H334 677 aaPredicted RBP22.97■■□□□ 1.27
MMP28-201ENST00000605424 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.97■■□□□ 1.27
MMP28-201ENST00000605424 DLEC1Q9Y238 1755 aa22.97■■□□□ 1.27
MMP28-201ENST00000605424 PLSCR1O15162 318 aa22.96■■□□□ 1.27
MMP28-201ENST00000605424 EN1Q05925 392 aaPredicted RBP22.96■■□□□ 1.27
MMP28-201ENST00000605424 AXDND1Q5T1B0 1012 aaPredicted RBP22.96■■□□□ 1.27
MMP28-201ENST00000605424 IFIT1BQ5T764 474 aaKnown RBP22.96■■□□□ 1.27
MMP28-201ENST00000605424 CERS3Q8IU89 383 aa22.96■■□□□ 1.27
MMP28-201ENST00000605424 STK11IPQ8N1F8 1099 aa22.96■■□□□ 1.27
MMP28-201ENST00000605424 ANO10Q9NW15 660 aa22.96■■□□□ 1.27
MMP28-201ENST00000605424 LAMB1P07942 1786 aa22.96■■□□□ 1.27
MMP28-201ENST00000605424 SERPINB2P05120 415 aa22.96■■□□□ 1.27
MMP28-201ENST00000605424 LDHBP07195 334 aaKnown RBP22.96■■□□□ 1.27
MMP28-201ENST00000605424 ATP2B4P23634 1241 aa22.96■■□□□ 1.27
MMP28-201ENST00000605424 TXNRD1Q16881 649 aa22.96■■□□□ 1.27
MMP28-201ENST00000605424 LUZP1Q86V48 1076 aa22.96■■□□□ 1.27
MMP28-201ENST00000605424 NOSTRINQ8IVI9 506 aa22.96■■□□□ 1.27
MMP28-201ENST00000605424 NUP133Q8WUM0 1156 aa22.96■■□□□ 1.27
MMP28-201ENST00000605424 BBOX1O75936 387 aa22.95■■□□□ 1.26
MMP28-201ENST00000605424 DDAH1O94760 285 aa22.95■■□□□ 1.26
MMP28-201ENST00000605424 NDUFA8P51970 172 aa22.95■■□□□ 1.26
MMP28-201ENST00000605424 TIGD1Q96MW7 591 aa22.95■■□□□ 1.26
MMP28-201ENST00000605424 MAP3K14Q99558 947 aa22.95■■□□□ 1.26
MMP28-201ENST00000605424 SDF4Q9BRK5 362 aa22.95■■□□□ 1.26
MMP28-201ENST00000605424 DNAJC25Q9H1X3 360 aa22.95■■□□□ 1.26
MMP28-201ENST00000605424 A0A1B0GVL5 298 aa22.94■■□□□ 1.26
MMP28-201ENST00000605424 GOLGA6L6A8MZA4 724 aa22.94■■□□□ 1.26
MMP28-201ENST00000605424 XBP1P17861 261 aa22.94■■□□□ 1.26
MMP28-201ENST00000605424 PLCB2Q00722 1185 aa22.94■■□□□ 1.26
MMP28-201ENST00000605424 PDE4BQ07343 736 aa22.94■■□□□ 1.26
MMP28-201ENST00000605424 PTPAQ15257 358 aa22.94■■□□□ 1.26
MMP28-201ENST00000605424 EZH2Q15910 746 aaKnown RBP22.94■■□□□ 1.26
MMP28-201ENST00000605424 CAMKK2Q96RR4 588 aa22.94■■□□□ 1.26
MMP28-201ENST00000605424 MYH2Q9UKX2 1941 aa22.94■■□□□ 1.26
MMP28-201ENST00000605424 AP5Z1O43299 807 aa22.94■■□□□ 1.26
MMP28-201ENST00000605424 LDHCP07864 332 aa22.94■■□□□ 1.26
MMP28-201ENST00000605424 AKAP17AQ02040 695 aaKnown RBP22.94■■□□□ 1.26
MMP28-201ENST00000605424 CYP2D7A0A087X1C5 515 aa22.93■■□□□ 1.26
MMP28-201ENST00000605424 FAM237AA0A1B0GTK4 181 aa22.93■■□□□ 1.26
MMP28-201ENST00000605424 BAG3O95817 575 aa22.93■■□□□ 1.26
MMP28-201ENST00000605424 HOXA10P31260 410 aaPredicted RBP22.93■■□□□ 1.26
MMP28-201ENST00000605424 PPP4CP60510 307 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms