RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 IFIT2P09913 472 aaKnown RBP13.01□□□□□ -0.33
TUBE1-210ENST00000604967 ATP5JP18859 108 aa13.01□□□□□ -0.33
TUBE1-210ENST00000604967 CTGFP29279 349 aa13.01□□□□□ -0.33
TUBE1-210ENST00000604967 SCYL3Q8IZE3 742 aa13.01□□□□□ -0.33
TUBE1-210ENST00000604967 CD99L2Q8TCZ2 262 aa13.01□□□□□ -0.33
TUBE1-210ENST00000604967 HOOK2Q96ED9 719 aa13.01□□□□□ -0.33
TUBE1-210ENST00000604967 DNAJC2Q99543 621 aaKnown RBP13.01□□□□□ -0.33
TUBE1-210ENST00000604967 HAUS7Q99871 368 aa13.01□□□□□ -0.33
TUBE1-210ENST00000604967 LRRCC1Q9C099 1032 aa13.01□□□□□ -0.33
TUBE1-210ENST00000604967 ZHX2Q9Y6X8 837 aa13.01□□□□□ -0.33
TUBE1-210ENST00000604967 PTPRFP10586 1907 aa13□□□□□ -0.33
TUBE1-210ENST00000604967 ZNF532Q9HCE3 1301 aa13□□□□□ -0.33
TUBE1-210ENST00000604967 ALDH1A1P00352 501 aa13□□□□□ -0.33
TUBE1-210ENST00000604967 CETPP11597 493 aa13□□□□□ -0.33
TUBE1-210ENST00000604967 SNAPC2Q13487 334 aa13□□□□□ -0.33
TUBE1-210ENST00000604967 ARHGAP39Q9C0H5 1083 aa13□□□□□ -0.33
TUBE1-210ENST00000604967 SALL3Q9BXA9 1300 aa12.99□□□□□ -0.33
TUBE1-210ENST00000604967 A0A0G2JLL6 359 aaPredicted RBP12.99□□□□□ -0.33
TUBE1-210ENST00000604967 PRKAB2O43741 272 aa12.99□□□□□ -0.33
TUBE1-210ENST00000604967 CTNND1O60716 968 aaKnown RBP12.99□□□□□ -0.33
TUBE1-210ENST00000604967 BAG3O95817 575 aa12.99□□□□□ -0.33
TUBE1-210ENST00000604967 SLC9C2Q5TAH2 1124 aa12.99□□□□□ -0.33
TUBE1-210ENST00000604967 OTOP1Q7RTM1 612 aa12.99□□□□□ -0.33
TUBE1-210ENST00000604967 PRRT2Q7Z6L0 340 aaPredicted RBP12.99□□□□□ -0.33
TUBE1-210ENST00000604967 LCORLQ8N3X6 602 aa12.99□□□□□ -0.33
TUBE1-210ENST00000604967 CHMP4BQ9H444 224 aaKnown RBP12.99□□□□□ -0.33
TUBE1-210ENST00000604967 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.99□□□□□ -0.33
TUBE1-210ENST00000604967 PAG1Q9NWQ8 432 aa12.99□□□□□ -0.33
TUBE1-210ENST00000604967 HPS5Q9UPZ3 1129 aa12.99□□□□□ -0.33
TUBE1-210ENST00000604967 BRCA2P51587 3418 aa12.98□□□□□ -0.33
TUBE1-210ENST00000604967 CCDC85CA6NKD9 419 aa12.98□□□□□ -0.33
TUBE1-210ENST00000604967 CYP2D6P10635 497 aa12.98□□□□□ -0.33
TUBE1-210ENST00000604967 ADD2P35612 726 aa12.98□□□□□ -0.33
TUBE1-210ENST00000604967 CAP2P40123 477 aa12.98□□□□□ -0.33
TUBE1-210ENST00000604967 PLCD1P51178 756 aa12.98□□□□□ -0.33
TUBE1-210ENST00000604967 MAP3K12Q12852 859 aa12.98□□□□□ -0.33
TUBE1-210ENST00000604967 TAF1CQ15572 869 aaPredicted RBP12.98□□□□□ -0.33
TUBE1-210ENST00000604967 TNRC18O15417 2968 aaPredicted RBP12.98□□□□□ -0.33
TUBE1-210ENST00000604967 ATAD5Q96QE3 1844 aa12.97□□□□□ -0.33
TUBE1-210ENST00000604967 PDHXO00330 501 aa12.97□□□□□ -0.33
TUBE1-210ENST00000604967 CXCL11O14625 94 aa12.97□□□□□ -0.33
TUBE1-210ENST00000604967 CYP2C8P10632 490 aa12.97□□□□□ -0.33
TUBE1-210ENST00000604967 PLCG2P16885 1265 aa12.97□□□□□ -0.33
TUBE1-210ENST00000604967 TREML2Q5T2D2 321 aa12.97□□□□□ -0.33
TUBE1-210ENST00000604967 C17orf99Q6UX52 265 aa12.97□□□□□ -0.33
TUBE1-210ENST00000604967 ANKRD23Q86SG2 305 aa12.97□□□□□ -0.33
TUBE1-210ENST00000604967 SDR42E1Q8WUS8 393 aa12.97□□□□□ -0.33
TUBE1-210ENST00000604967 ARMT1Q9H993 441 aa12.97□□□□□ -0.33
TUBE1-210ENST00000604967 PI4KBQ9UBF8 816 aa12.97□□□□□ -0.33
TUBE1-210ENST00000604967 TRIM75PA6NK02 468 aa12.96□□□□□ -0.33
TUBE1-210ENST00000604967 TLR2O60603 784 aa12.96□□□□□ -0.33
TUBE1-210ENST00000604967 IGSF3O75054 1194 aa12.96□□□□□ -0.33
TUBE1-210ENST00000604967 GDF11O95390 407 aa12.96□□□□□ -0.33
TUBE1-210ENST00000604967 SP3Q02447 781 aa12.96□□□□□ -0.33
TUBE1-210ENST00000604967 POTEEQ6S8J3 1075 aa12.96□□□□□ -0.33
TUBE1-210ENST00000604967 EXOC6Q8TAG9 804 aa12.96□□□□□ -0.33
TUBE1-210ENST00000604967 PI4K2BQ8TCG2 481 aa12.96□□□□□ -0.33
TUBE1-210ENST00000604967 PUS7LQ9H0K6 701 aaKnown RBP12.96□□□□□ -0.33
TUBE1-210ENST00000604967 PICK1Q9NRD5 415 aa12.96□□□□□ -0.33
TUBE1-210ENST00000604967 ECHDC1Q9NTX5 307 aa12.96□□□□□ -0.33
TUBE1-210ENST00000604967 CPA4Q9UI42 421 aa12.96□□□□□ -0.33
TUBE1-210ENST00000604967 HERC5Q9UII4 1024 aaKnown RBP12.96□□□□□ -0.33
TUBE1-210ENST00000604967 MYH1P12882 1939 aa12.96□□□□□ -0.34
TUBE1-210ENST00000604967 CYP2D7A0A087X1C5 515 aa12.95□□□□□ -0.34
TUBE1-210ENST00000604967 MAGEB6P1A0A0J9YX57 407 aa12.95□□□□□ -0.34
TUBE1-210ENST00000604967 ECM2O94769 699 aaPredicted RBP12.95□□□□□ -0.34
TUBE1-210ENST00000604967 BCRP11274 1271 aa12.95□□□□□ -0.34
TUBE1-210ENST00000604967 SHMT1P34896 483 aa12.95□□□□□ -0.34
TUBE1-210ENST00000604967 GABPAQ06546 454 aa12.95□□□□□ -0.34
TUBE1-210ENST00000604967 SPP2Q13103 211 aa12.95□□□□□ -0.34
TUBE1-210ENST00000604967 TTF1Q15361 905 aaPredicted RBP12.95□□□□□ -0.34
TUBE1-210ENST00000604967 OTUD7BQ6GQQ9 843 aa12.95□□□□□ -0.34
TUBE1-210ENST00000604967 SLC44A5Q8NCS7 719 aa12.95□□□□□ -0.34
TUBE1-210ENST00000604967 NOL10Q9BSC4 688 aaKnown RBP12.95□□□□□ -0.34
TUBE1-210ENST00000604967 DHX36Q9H2U1 1008 aaKnown RBP12.95□□□□□ -0.34
TUBE1-210ENST00000604967 ZFYVE28Q9HCC9 887 aa12.95□□□□□ -0.34
TUBE1-210ENST00000604967 ZCCHC17Q9NP64 241 aaKnown RBP12.95□□□□□ -0.34
TUBE1-210ENST00000604967 DCP1AQ9NPI6 582 aaPredicted RBP12.95□□□□□ -0.34
TUBE1-210ENST00000604967 TRIM17Q9Y577 477 aa12.95□□□□□ -0.34
TUBE1-210ENST00000604967 LOC285556D6RIA3 1793 aa12.94□□□□□ -0.34
TUBE1-210ENST00000604967 NAV1Q8NEY1 1877 aa12.94□□□□□ -0.34
TUBE1-210ENST00000604967 PEX10O60683 326 aa12.94□□□□□ -0.34
TUBE1-210ENST00000604967 MBD4O95243 580 aa12.94□□□□□ -0.34
TUBE1-210ENST00000604967 IGHDP01880 384 aa12.94□□□□□ -0.34
TUBE1-210ENST00000604967 GUCY1A2P33402 732 aa12.94□□□□□ -0.34
TUBE1-210ENST00000604967 USP5P45974 858 aa12.94□□□□□ -0.34
TUBE1-210ENST00000604967 SOX10P56693 466 aa12.94□□□□□ -0.34
TUBE1-210ENST00000604967 TATDN1Q6P1N9 297 aa12.94□□□□□ -0.34
TUBE1-210ENST00000604967 FBXO46Q6PJ61 603 aaPredicted RBP12.94□□□□□ -0.34
TUBE1-210ENST00000604967 FOXP4Q8IVH2 680 aaPredicted RBP12.94□□□□□ -0.34
TUBE1-210ENST00000604967 PTPN22Q9Y2R2 807 aa12.94□□□□□ -0.34
TUBE1-210ENST00000604967 RGS19P49795 217 aa12.93□□□□□ -0.34
TUBE1-210ENST00000604967 HMGCS2P54868 508 aa12.93□□□□□ -0.34
TUBE1-210ENST00000604967 HDAC1Q13547 482 aaPredicted RBP12.93□□□□□ -0.34
TUBE1-210ENST00000604967 GADL1Q6ZQY3 521 aa12.93□□□□□ -0.34
TUBE1-210ENST00000604967 ZNF280CQ8ND82 737 aa12.93□□□□□ -0.34
TUBE1-210ENST00000604967 OSBP2Q969R2 916 aa12.93□□□□□ -0.34
TUBE1-210ENST00000604967 DYNLL2Q96FJ2 89 aa12.93□□□□□ -0.34
TUBE1-210ENST00000604967 TRIM47Q96LD4 638 aa12.93□□□□□ -0.34
TUBE1-210ENST00000604967 EHD4Q9H223 541 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms