RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 ATRIPQ8WXE1 791 aa17.42■□□□□ 0.38
LYSMD4-211ENST00000604213 PNKPQ96T60 521 aa17.42■□□□□ 0.38
LYSMD4-211ENST00000604213 PDE11AQ9HCR9 933 aa17.42■□□□□ 0.38
LYSMD4-211ENST00000604213 PUF60Q9UHX1 559 aaKnown RBP17.42■□□□□ 0.38
LYSMD4-211ENST00000604213 ECM29Q5VYK3 1845 aa17.42■□□□□ 0.38
LYSMD4-211ENST00000604213 POLR2DO15514 142 aaKnown RBP17.42■□□□□ 0.38
LYSMD4-211ENST00000604213 PTPREP23469 700 aa17.42■□□□□ 0.38
LYSMD4-211ENST00000604213 ACTN2P35609 894 aa17.42■□□□□ 0.38
LYSMD4-211ENST00000604213 APTXQ7Z2E3 356 aaKnown RBP17.42■□□□□ 0.38
LYSMD4-211ENST00000604213 HDXQ7Z353 690 aa17.42■□□□□ 0.38
LYSMD4-211ENST00000604213 NOSTRINQ8IVI9 506 aa17.42■□□□□ 0.38
LYSMD4-211ENST00000604213 GRAMD1CQ8IYS0 662 aa17.42■□□□□ 0.38
LYSMD4-211ENST00000604213 CEP112Q8N8E3 955 aa17.42■□□□□ 0.38
LYSMD4-211ENST00000604213 TRIML1Q8N9V2 468 aa17.42■□□□□ 0.38
LYSMD4-211ENST00000604213 IGDCC4Q8TDY8 1250 aa17.42■□□□□ 0.38
LYSMD4-211ENST00000604213 POTEB2H3BUK9 544 aa17.41■□□□□ 0.38
LYSMD4-211ENST00000604213 MYO1CO00159 1063 aa17.41■□□□□ 0.38
LYSMD4-211ENST00000604213 TEX33O43247 280 aa17.41■□□□□ 0.38
LYSMD4-211ENST00000604213 PLCD1P51178 756 aa17.41■□□□□ 0.38
LYSMD4-211ENST00000604213 SLC9C2Q5TAH2 1124 aa17.41■□□□□ 0.38
LYSMD4-211ENST00000604213 MSL3Q8N5Y2 521 aaKnown RBP17.41■□□□□ 0.38
LYSMD4-211ENST00000604213 RASSF4Q9H2L5 321 aa17.41■□□□□ 0.38
LYSMD4-211ENST00000604213 SEC31BQ9NQW1 1179 aa17.41■□□□□ 0.38
LYSMD4-211ENST00000604213 ABCC12Q96J65 1359 aa17.41■□□□□ 0.38
LYSMD4-211ENST00000604213 GOLGA8AA7E2F4 631 aa17.4■□□□□ 0.38
LYSMD4-211ENST00000604213 B4E1Z4 1266 aa17.4■□□□□ 0.38
LYSMD4-211ENST00000604213 CABP4P57796 275 aa17.4■□□□□ 0.38
LYSMD4-211ENST00000604213 MAPK8IP2Q13387 824 aaPredicted RBP17.4■□□□□ 0.38
LYSMD4-211ENST00000604213 NAA15Q9BXJ9 866 aaKnown RBP17.4■□□□□ 0.38
LYSMD4-211ENST00000604213 LY9Q9HBG7 655 aa17.4■□□□□ 0.38
LYSMD4-211ENST00000604213 LAMB4A4D0S4 1761 aa17.4■□□□□ 0.38
LYSMD4-211ENST00000604213 NUP188Q5SRE5 1749 aa17.4■□□□□ 0.38
LYSMD4-211ENST00000604213 TRIM66O15016 1216 aa17.4■□□□□ 0.38
LYSMD4-211ENST00000604213 KIF5CO60282 957 aa17.4■□□□□ 0.38
LYSMD4-211ENST00000604213 ERCC5P28715 1186 aaPredicted RBP17.4■□□□□ 0.38
LYSMD4-211ENST00000604213 RBL2Q08999 1139 aa17.4■□□□□ 0.38
LYSMD4-211ENST00000604213 MCM6Q14566 821 aa17.4■□□□□ 0.38
LYSMD4-211ENST00000604213 SPATA20Q8TB22 786 aa17.4■□□□□ 0.38
LYSMD4-211ENST00000604213 IPO4Q8TEX9 1081 aaKnown RBP17.4■□□□□ 0.38
LYSMD4-211ENST00000604213 TMEM87BQ96K49 555 aa17.4■□□□□ 0.38
LYSMD4-211ENST00000604213 MYL10Q9BUA6 226 aa17.4■□□□□ 0.38
LYSMD4-211ENST00000604213 SLC26A6Q9BXS9 759 aa17.4■□□□□ 0.38
LYSMD4-211ENST00000604213 VPS18Q9P253 973 aa17.4■□□□□ 0.38
LYSMD4-211ENST00000604213 L1RE1Q9UN81 338 aa17.4■□□□□ 0.38
LYSMD4-211ENST00000604213 STK36Q9NRP7 1315 aa17.4■□□□□ 0.38
LYSMD4-211ENST00000604213 BTBD18B2RXH4 712 aa17.39■□□□□ 0.38
LYSMD4-211ENST00000604213 ACTN4O43707 911 aaKnown RBP17.39■□□□□ 0.38
LYSMD4-211ENST00000604213 TUBB2AQ13885 445 aa17.39■□□□□ 0.38
LYSMD4-211ENST00000604213 CCDC57Q2TAC2 916 aa17.39■□□□□ 0.38
LYSMD4-211ENST00000604213 SGMS1Q86VZ5 419 aa17.39■□□□□ 0.38
LYSMD4-211ENST00000604213 TUBB2BQ9BVA1 445 aa17.39■□□□□ 0.38
LYSMD4-211ENST00000604213 ZBTB3Q9H5J0 574 aa17.39■□□□□ 0.38
LYSMD4-211ENST00000604213 ADD2P35612 726 aa17.39■□□□□ 0.37
LYSMD4-211ENST00000604213 PBX1P40424 430 aa17.39■□□□□ 0.37
LYSMD4-211ENST00000604213 NFXL1Q6ZNB6 911 aa17.39■□□□□ 0.37
LYSMD4-211ENST00000604213 RASGRP2Q7LDG7 609 aa17.39■□□□□ 0.37
LYSMD4-211ENST00000604213 KRT28Q7Z3Y7 464 aa17.39■□□□□ 0.37
LYSMD4-211ENST00000604213 SRLQ86TD4 932 aa17.39■□□□□ 0.37
LYSMD4-211ENST00000604213 ABCB6Q9NP58 842 aa17.39■□□□□ 0.37
LYSMD4-211ENST00000604213 FBXO3Q9UK99 471 aa17.39■□□□□ 0.37
LYSMD4-211ENST00000604213 TRPM3Q9HCF6 1732 aaPredicted RBP17.39■□□□□ 0.37
LYSMD4-211ENST00000604213 FMNL1O95466 1100 aaPredicted RBP17.38■□□□□ 0.37
LYSMD4-211ENST00000604213 SSRP1Q08945 709 aaKnown RBP17.38■□□□□ 0.37
LYSMD4-211ENST00000604213 ZNF569Q5MCW4 686 aa17.38■□□□□ 0.37
LYSMD4-211ENST00000604213 PPFIBP1Q86W92 1011 aa17.38■□□□□ 0.37
LYSMD4-211ENST00000604213 IGSF22Q8N9C0 903 aa17.38■□□□□ 0.37
LYSMD4-211ENST00000604213 ZNF579Q8NAF0 562 aaKnown RBP17.38■□□□□ 0.37
LYSMD4-211ENST00000604213 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.38■□□□□ 0.37
LYSMD4-211ENST00000604213 N4BP1O75113 896 aaKnown RBP17.38■□□□□ 0.37
LYSMD4-211ENST00000604213 MMP1P03956 469 aa17.38■□□□□ 0.37
LYSMD4-211ENST00000604213 C10orf67Q8IYJ2 551 aa17.38■□□□□ 0.37
LYSMD4-211ENST00000604213 RRP15Q9Y3B9 282 aaKnown RBP17.38■□□□□ 0.37
LYSMD4-211ENST00000604213 ERLIN1O75477 346 aa17.37■□□□□ 0.37
LYSMD4-211ENST00000604213 GUCY1A2P33402 732 aa17.37■□□□□ 0.37
LYSMD4-211ENST00000604213 MCAMP43121 646 aa17.37■□□□□ 0.37
LYSMD4-211ENST00000604213 TUBB4BP68371 445 aa17.37■□□□□ 0.37
LYSMD4-211ENST00000604213 TMEM67Q5HYA8 995 aa17.37■□□□□ 0.37
LYSMD4-211ENST00000604213 DIS3L2Q8IYB7 885 aaKnown RBP17.37■□□□□ 0.37
LYSMD4-211ENST00000604213 SUGCTQ9HAC7 445 aa17.37■□□□□ 0.37
LYSMD4-211ENST00000604213 MYH7P12883 1935 aa17.37■□□□□ 0.37
LYSMD4-211ENST00000604213 ATRNO75882 1429 aa17.37■□□□□ 0.37
LYSMD4-211ENST00000604213 A1BGP04217 495 aa17.37■□□□□ 0.37
LYSMD4-211ENST00000604213 KIF4BQ2VIQ3 1234 aa17.37■□□□□ 0.37
LYSMD4-211ENST00000604213 SPATA1Q5VX52 437 aa17.37■□□□□ 0.37
LYSMD4-211ENST00000604213 KANK3Q6NY19 840 aa17.37■□□□□ 0.37
LYSMD4-211ENST00000604213 CPLX3Q8WVH0 158 aa17.37■□□□□ 0.37
LYSMD4-211ENST00000604213 ADD3Q9UEY8 706 aaKnown RBP17.37■□□□□ 0.37
LYSMD4-211ENST00000604213 KCNJ14Q9UNX9 436 aa17.37■□□□□ 0.37
LYSMD4-211ENST00000604213 CTAGE9A4FU28 777 aa17.36■□□□□ 0.37
LYSMD4-211ENST00000604213 MFAP3LO75121 409 aa17.36■□□□□ 0.37
LYSMD4-211ENST00000604213 EIF3JO75822 258 aaKnown RBP17.36■□□□□ 0.37
LYSMD4-211ENST00000604213 APPP05067 770 aa17.36■□□□□ 0.37
LYSMD4-211ENST00000604213 USP49Q70CQ1 688 aa17.36■□□□□ 0.37
LYSMD4-211ENST00000604213 WASF1Q92558 559 aa17.36■□□□□ 0.37
LYSMD4-211ENST00000604213 INCENPQ9NQS7 918 aa17.36■□□□□ 0.37
LYSMD4-211ENST00000604213 RSPH14Q9UHP6 348 aa17.36■□□□□ 0.37
LYSMD4-211ENST00000604213 FAN1Q9Y2M0 1017 aa17.36■□□□□ 0.37
LYSMD4-211ENST00000604213 PCDHB6Q9Y5E3 794 aa17.36■□□□□ 0.37
LYSMD4-211ENST00000604213 SRPRBQ9Y5M8 271 aaKnown RBP17.36■□□□□ 0.37
LYSMD4-211ENST00000604213 FER1L4A9Z1Z3 1794 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms