RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 STT3AP46977 705 aa5.84□□□□□ -1.48
SPTBN1-206ENST00000602898 LLGL2Q6P1M3 1020 aa5.84□□□□□ -1.48
SPTBN1-206ENST00000602898 RASSF3Q86WH2 238 aa5.84□□□□□ -1.48
SPTBN1-206ENST00000602898 DDX42Q86XP3 938 aaKnown RBP eCLIP5.84□□□□□ -1.48
SPTBN1-206ENST00000602898 CKAP2LQ8IYA6 745 aa5.84□□□□□ -1.48
SPTBN1-206ENST00000602898 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.84□□□□□ -1.48
SPTBN1-206ENST00000602898 GTF3C2Q8WUA4 911 aaPredicted RBP5.84□□□□□ -1.48
SPTBN1-206ENST00000602898 EMID1Q96A84 441 aaPredicted RBP5.84□□□□□ -1.48
SPTBN1-206ENST00000602898 DEPDC7Q96QD5 511 aa5.84□□□□□ -1.48
SPTBN1-206ENST00000602898 DNAJC7Q99615 494 aa5.84□□□□□ -1.48
SPTBN1-206ENST00000602898 RASSF4Q9H2L5 321 aa5.84□□□□□ -1.48
SPTBN1-206ENST00000602898 FAM50BQ9Y247 325 aa5.84□□□□□ -1.48
SPTBN1-206ENST00000602898 MORC2Q9Y6X9 1032 aaPredicted RBP5.84□□□□□ -1.48
SPTBN1-206ENST00000602898 IQGAP1P46940 1657 aa5.84□□□□□ -1.48
SPTBN1-206ENST00000602898 XIRP1Q702N8 1843 aaKnown RBP5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 ZNF518AQ6AHZ1 1483 aa5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 SHANK2Q9UPX8 1470 aa5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 PRRT4C9JH25 899 aa5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 IPO7O95373 1038 aaKnown RBP5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 VARSP26640 1264 aaKnown RBP5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 PTK7Q13308 1070 aa5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 FXNQ16595 210 aa5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 ALFQ53S48 1182 aa5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 BRICD5Q6PL45 260 aa5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 KIAA0907Q7Z7F0 614 aaPredicted RBP5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 RETREG3Q86VR2 466 aa5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 MGARPQ8TDB4 240 aa5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 HNRNPLLQ8WVV9 542 aaKnown RBP5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 SELENOOQ9BVL4 669 aa5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 NWD1Q149M9 1564 aa5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 ORC4O43929 436 aa5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 LZTS3O60299 673 aaPredicted RBP5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 HSD17B7P56937 341 aa5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 TRIM29Q14134 588 aa5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 ANKRD45Q5TZF3 282 aa5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 KIAA1614Q5VZ46 1190 aa5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 PCDH10Q9P2E7 1040 aa5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 DNMT1P26358 1616 aaKnown RBP5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 ABCA6Q8N139 1617 aa5.83□□□□□ -1.48
SPTBN1-206ENST00000602898 FMNL1O95466 1100 aaPredicted RBP5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 NCAM1P13591 858 aa5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 UBA7P41226 1012 aa5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 RENBPP51606 427 aa5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 GSCP56915 257 aaPredicted RBP5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 USP46P62068 366 aa5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 SQSTM1Q13501 440 aa5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 CCDC91Q7Z6B0 441 aa5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 MORC1Q86VD1 984 aa5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 SAMD14Q8IZD0 417 aaPredicted RBP5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 FRS2Q8WU20 508 aa5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 ZNF496Q96IT1 587 aaPredicted RBP5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 RTFDC1Q9BY42 306 aaPredicted RBP5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 CCDC8Q9H0W5 538 aaPredicted RBP5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 TRMT1Q9NXH9 659 aaKnown RBP5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 FBXO2Q9UK22 296 aaPredicted RBP5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 ODF2LQ9ULJ1 636 aa5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 ZNF652Q9Y2D9 606 aa5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 IBTKQ9P2D0 1353 aaPredicted RBP5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 MAGEB6P1A0A0J9YX57 407 aa5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 C21orf2O43822 256 aa5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 TMEM127O75204 238 aa5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 SARSP49591 514 aaKnown RBP5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 TUBB8Q3ZCM7 444 aa5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 PLA2G2CQ5R387 149 aa5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 ANKRD13BQ86YJ7 626 aa5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 PDCL2Q8N4E4 241 aa5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 NOL10Q9BSC4 688 aaKnown RBP5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 NUCKS1Q9H1E3 243 aaKnown RBP5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 SUDS3Q9H7L9 328 aaPredicted RBP5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 CD2APQ9Y5K6 639 aa5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 SETD5Q9C0A6 1442 aa5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 ATP7AQ04656 1500 aa5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 FAM135BQ49AJ0 1406 aa5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 SCAPERQ9BY12 1400 aa5.82□□□□□ -1.48
SPTBN1-206ENST00000602898 CCDC196A0A1B0GTZ2 297 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 RASSF10A6NK89 507 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 H0Y3Z8 333 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 F2P00734 622 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 CTSHP09668 335 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 FBXO45P0C2W1 286 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 TCIRG1Q13488 830 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 TERF2Q15554 542 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 C6orf118Q5T5N4 469 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 RC3H1Q5TC82 1133 aaKnown RBP5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 MILR1Q7Z6M3 343 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 FAM174AQ8TBP5 190 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 TBC1D22AQ8WUA7 517 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 SCLT1Q96NL6 688 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 FMNL2Q96PY5 1086 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 AP1M1Q9BXS5 423 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 DHX36Q9H2U1 1008 aaKnown RBP5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 LGR6Q9HBX8 967 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 LAMC1P11047 1609 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 USP17L5A8MUK1 530 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 VSTM5A8MXK1 200 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 F6X3S4 739 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 NBPF7P0C2Y1 421 aaPredicted RBP5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 RAB15P59190 212 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 DPYDQ12882 1025 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 PAK2Q13177 524 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms