RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 ANKRD24Q8TF21 1146 aa5.03□□□□□ -1.6
SGMS1-207ENST00000602619 C20orf173Q96LM9 149 aa5.03□□□□□ -1.6
SGMS1-207ENST00000602619 SRCIN1Q9C0H9 1055 aa5.03□□□□□ -1.6
SGMS1-207ENST00000602619 ABCB6Q9NP58 842 aa5.03□□□□□ -1.6
SGMS1-207ENST00000602619 DISC1Q9NRI5 854 aa5.03□□□□□ -1.6
SGMS1-207ENST00000602619 SNX11Q9Y5W9 270 aa5.03□□□□□ -1.6
SGMS1-207ENST00000602619 NPIPB6E9PJ23 425 aa5.02□□□□□ -1.61
SGMS1-207ENST00000602619 NFIBO00712 420 aa5.02□□□□□ -1.61
SGMS1-207ENST00000602619 GIPC1O14908 333 aa5.02□□□□□ -1.61
SGMS1-207ENST00000602619 LDHBP07195 334 aaKnown RBP5.02□□□□□ -1.61
SGMS1-207ENST00000602619 ITIH2P19823 946 aa5.02□□□□□ -1.61
SGMS1-207ENST00000602619 AFMP43652 599 aa5.02□□□□□ -1.61
SGMS1-207ENST00000602619 MAPK8P45983 427 aa5.02□□□□□ -1.61
SGMS1-207ENST00000602619 MPZL3Q6UWV2 235 aa5.02□□□□□ -1.61
SGMS1-207ENST00000602619 DDX54Q8TDD1 881 aaKnown RBP5.02□□□□□ -1.61
SGMS1-207ENST00000602619 HEXIM2Q96MH2 286 aaKnown RBP5.02□□□□□ -1.61
SGMS1-207ENST00000602619 FRMD6Q96NE9 622 aa5.02□□□□□ -1.61
SGMS1-207ENST00000602619 PIDD1Q9HB75 910 aa5.02□□□□□ -1.61
SGMS1-207ENST00000602619 ATP2B2Q01814 1243 aa5.01□□□□□ -1.61
SGMS1-207ENST00000602619 IKZF1Q13422 519 aa5.01□□□□□ -1.61
SGMS1-207ENST00000602619 GRM2Q14416 872 aa5.01□□□□□ -1.61
SGMS1-207ENST00000602619 EAPPQ56P03 285 aaPredicted RBP5.01□□□□□ -1.61
SGMS1-207ENST00000602619 FAM214BQ7L5A3 538 aa5.01□□□□□ -1.61
SGMS1-207ENST00000602619 RGS22Q8NE09 1264 aa5.01□□□□□ -1.61
SGMS1-207ENST00000602619 EPS8L3Q8TE67 593 aaKnown RBP5.01□□□□□ -1.61
SGMS1-207ENST00000602619 ASB11Q8WXH4 323 aa5.01□□□□□ -1.61
SGMS1-207ENST00000602619 SETDB2Q96T68 719 aa5.01□□□□□ -1.61
SGMS1-207ENST00000602619 ATXN3LQ9H3M9 355 aa5.01□□□□□ -1.61
SGMS1-207ENST00000602619 CCDC86Q9H6F5 360 aaKnown RBP5.01□□□□□ -1.61
SGMS1-207ENST00000602619 LIN7BQ9HAP6 207 aa5.01□□□□□ -1.61
SGMS1-207ENST00000602619 KCNK12Q9HB15 430 aa5.01□□□□□ -1.61
SGMS1-207ENST00000602619 TRAK1Q9UPV9 953 aa5.01□□□□□ -1.61
SGMS1-207ENST00000602619 RNGTTO60942 597 aaKnown RBP5□□□□□ -1.61
SGMS1-207ENST00000602619 GNA15P30679 374 aa5□□□□□ -1.61
SGMS1-207ENST00000602619 ID3Q02535 119 aa5□□□□□ -1.61
SGMS1-207ENST00000602619 TTLL4Q14679 1199 aa5□□□□□ -1.61
SGMS1-207ENST00000602619 LARP7Q4G0J3 582 aaKnown RBP eCLIP5□□□□□ -1.61
SGMS1-207ENST00000602619 TMEM67Q5HYA8 995 aa5□□□□□ -1.61
SGMS1-207ENST00000602619 PI16Q6UXB8 463 aa5□□□□□ -1.61
SGMS1-207ENST00000602619 FBXO15Q8NCQ5 510 aaPredicted RBP5□□□□□ -1.61
SGMS1-207ENST00000602619 C3orf58Q8NDZ4 430 aa5□□□□□ -1.61
SGMS1-207ENST00000602619 KIRREL1Q96J84 757 aa5□□□□□ -1.61
SGMS1-207ENST00000602619 PCOLCE2Q9UKZ9 415 aa5□□□□□ -1.61
SGMS1-207ENST00000602619 WWC3Q9ULE0 1092 aa5□□□□□ -1.61
SGMS1-207ENST00000602619 PCDHGC5Q9Y5F6 944 aa5□□□□□ -1.61
SGMS1-207ENST00000602619 RBM47A0AV96 593 aaKnown RBP4.99□□□□□ -1.61
SGMS1-207ENST00000602619 ZNF862O60290 1169 aa4.99□□□□□ -1.61
SGMS1-207ENST00000602619 SLFN14P0C7P3 912 aa4.99□□□□□ -1.61
SGMS1-207ENST00000602619 XRCC5P13010 732 aaKnown RBP4.99□□□□□ -1.61
SGMS1-207ENST00000602619 HCLS1P14317 486 aaPredicted RBP4.99□□□□□ -1.61
SGMS1-207ENST00000602619 HOXA5P20719 270 aa4.99□□□□□ -1.61
SGMS1-207ENST00000602619 KCNA10Q16322 511 aa4.99□□□□□ -1.61
SGMS1-207ENST00000602619 RPS26P11Q5JNZ5 115 aaPredicted RBP4.99□□□□□ -1.61
SGMS1-207ENST00000602619 DIRC2Q96SL1 478 aa4.99□□□□□ -1.61
SGMS1-207ENST00000602619 ZC3H12CQ9C0D7 883 aaKnown RBP4.99□□□□□ -1.61
SGMS1-207ENST00000602619 ZNF576Q9H609 170 aa4.99□□□□□ -1.61
SGMS1-207ENST00000602619 CD320Q9NPF0 282 aa4.99□□□□□ -1.61
SGMS1-207ENST00000602619 CCDC9Q9Y3X0 531 aaKnown RBP4.99□□□□□ -1.61
SGMS1-207ENST00000602619 TMEM238LA0A1B0GVL6 79 aa4.98□□□□□ -1.61
SGMS1-207ENST00000602619 TMEM253P0C7T8 217 aa4.98□□□□□ -1.61
SGMS1-207ENST00000602619 DAB2P98082 770 aa4.98□□□□□ -1.61
SGMS1-207ENST00000602619 ATG14Q6ZNE5 492 aa4.98□□□□□ -1.61
SGMS1-207ENST00000602619 CYFIP1Q7L576 1253 aa4.98□□□□□ -1.61
SGMS1-207ENST00000602619 TMC4Q7Z404 712 aa4.98□□□□□ -1.61
SGMS1-207ENST00000602619 SPACA3Q8IXA5 215 aa4.98□□□□□ -1.61
SGMS1-207ENST00000602619 TOP6BLQ8N6T0 577 aa4.98□□□□□ -1.61
SGMS1-207ENST00000602619 BCO2Q9BYV7 579 aa4.98□□□□□ -1.61
SGMS1-207ENST00000602619 OSBPL7Q9BZF2 842 aa4.98□□□□□ -1.61
SGMS1-207ENST00000602619 EHD4Q9H223 541 aa4.98□□□□□ -1.61
SGMS1-207ENST00000602619 NSUN3Q9H649 340 aaKnown RBP4.98□□□□□ -1.61
SGMS1-207ENST00000602619 C12orf49Q9H741 205 aa4.98□□□□□ -1.61
SGMS1-207ENST00000602619 C19orf73Q9NVV2 129 aa4.98□□□□□ -1.61
SGMS1-207ENST00000602619 NLRP2Q9NX02 1062 aa4.98□□□□□ -1.61
SGMS1-207ENST00000602619 PPM1HQ9ULR3 514 aa4.98□□□□□ -1.61
SGMS1-207ENST00000602619 SPG7Q9UQ90 795 aa4.98□□□□□ -1.61
SGMS1-207ENST00000602619 NEFMP07197 916 aa4.97□□□□□ -1.61
SGMS1-207ENST00000602619 ZNF16P17020 682 aaPredicted RBP4.97□□□□□ -1.61
SGMS1-207ENST00000602619 AP3B2Q13367 1082 aa4.97□□□□□ -1.61
SGMS1-207ENST00000602619 NKPD1Q17RQ9 610 aa4.97□□□□□ -1.61
SGMS1-207ENST00000602619 KIF4BQ2VIQ3 1234 aa4.97□□□□□ -1.61
SGMS1-207ENST00000602619 RELTQ969Z4 430 aa4.97□□□□□ -1.61
SGMS1-207ENST00000602619 DUSP9Q99956 384 aaKnown RBP4.97□□□□□ -1.61
SGMS1-207ENST00000602619 BCL2L13Q9BXK5 485 aa4.97□□□□□ -1.61
SGMS1-207ENST00000602619 FAM8A1Q9UBU6 413 aa4.97□□□□□ -1.61
SGMS1-207ENST00000602619 AK5Q9Y6K8 562 aa4.97□□□□□ -1.61
SGMS1-207ENST00000602619 GADD45BO75293 160 aaPredicted RBP4.96□□□□□ -1.62
SGMS1-207ENST00000602619 TAGLNQ01995 201 aaKnown RBP4.96□□□□□ -1.62
SGMS1-207ENST00000602619 MRPL58Q14197 206 aaKnown RBP4.96□□□□□ -1.62
SGMS1-207ENST00000602619 CIAPIN1Q6FI81 312 aa4.96□□□□□ -1.62
SGMS1-207ENST00000602619 NXPE4Q6UWF7 544 aa4.96□□□□□ -1.62
SGMS1-207ENST00000602619 ISL2Q96A47 359 aa4.96□□□□□ -1.62
SGMS1-207ENST00000602619 PARP2Q9UGN5 583 aa4.96□□□□□ -1.62
SGMS1-207ENST00000602619 ETV2O00321 342 aaPredicted RBP4.95□□□□□ -1.62
SGMS1-207ENST00000602619 IGF2BP3O00425 579 aaKnown RBP eCLIP4.95□□□□□ -1.62
SGMS1-207ENST00000602619 MED14OSP0DP75 135 aa4.95□□□□□ -1.62
SGMS1-207ENST00000602619 VAMP1P23763 118 aa4.95□□□□□ -1.62
SGMS1-207ENST00000602619 GSTT1P30711 240 aa4.95□□□□□ -1.62
SGMS1-207ENST00000602619 ZNF157P51786 506 aaPredicted RBP4.95□□□□□ -1.62
SGMS1-207ENST00000602619 GIPC2Q8TF65 315 aa4.95□□□□□ -1.62
SGMS1-207ENST00000602619 RNF19AQ9NV58 838 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms