RNA–Protein interactions for RNA: ENST00000602287.5

SFXN2-204, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-204ENST00000602287 ATP8B2P98198 1209 aa18.69■□□□□ 0.58
SFXN2-204ENST00000602287 TEX11Q8IYF3 940 aa18.69■□□□□ 0.58
SFXN2-204ENST00000602287 NKX2-3Q8TAU0 364 aa18.69■□□□□ 0.58
SFXN2-204ENST00000602287 SMCR8Q8TEV9 937 aaPredicted RBP18.69■□□□□ 0.58
SFXN2-204ENST00000602287 ZNF512BQ96KM6 892 aaPredicted RBP18.69■□□□□ 0.58
SFXN2-204ENST00000602287 HERC5Q9UII4 1024 aaKnown RBP18.69■□□□□ 0.58
SFXN2-204ENST00000602287 PNMA3Q9UL41 463 aa18.69■□□□□ 0.58
SFXN2-204ENST00000602287 AGTPBP1Q9UPW5 1226 aa18.69■□□□□ 0.58
SFXN2-204ENST00000602287 CEP290O15078 2479 aa18.69■□□□□ 0.58
SFXN2-204ENST00000602287 SIPA1L1O43166 1804 aa18.68■□□□□ 0.58
SFXN2-204ENST00000602287 NAA16Q6N069 864 aaPredicted RBP18.68■□□□□ 0.58
SFXN2-204ENST00000602287 PROCA1Q8NCQ7 364 aaPredicted RBP18.68■□□□□ 0.58
SFXN2-204ENST00000602287 SLAIN1Q8ND83 568 aa18.68■□□□□ 0.58
SFXN2-204ENST00000602287 DHX36Q9H2U1 1008 aaKnown RBP18.68■□□□□ 0.58
SFXN2-204ENST00000602287 ZBED9Q6R2W3 1325 aa18.68■□□□□ 0.58
SFXN2-204ENST00000602287 SURF6O75683 361 aaKnown RBP18.67■□□□□ 0.58
SFXN2-204ENST00000602287 ECM2O94769 699 aaPredicted RBP18.67■□□□□ 0.58
SFXN2-204ENST00000602287 MYCP01106 439 aaPredicted RBP18.67■□□□□ 0.58
SFXN2-204ENST00000602287 UBXN2AP68543 259 aa18.67■□□□□ 0.58
SFXN2-204ENST00000602287 NOP58Q9Y2X3 529 aaKnown RBP18.67■□□□□ 0.58
SFXN2-204ENST00000602287 SLURP2P0DP57 97 aa18.66■□□□□ 0.58
SFXN2-204ENST00000602287 CAP2P40123 477 aa18.66■□□□□ 0.58
SFXN2-204ENST00000602287 PPP4CP60510 307 aa18.66■□□□□ 0.58
SFXN2-204ENST00000602287 PRKCZQ05513 592 aa18.66■□□□□ 0.58
SFXN2-204ENST00000602287 PABPC4Q13310 644 aaKnown RBP eCLIP18.66■□□□□ 0.58
SFXN2-204ENST00000602287 ZNF280CQ8ND82 737 aa18.66■□□□□ 0.58
SFXN2-204ENST00000602287 SH3RF3Q8TEJ3 882 aaPredicted RBP18.66■□□□□ 0.58
SFXN2-204ENST00000602287 DBNDD2Q9BQY9 259 aa18.66■□□□□ 0.58
SFXN2-204ENST00000602287 PI4KBQ9UBF8 816 aa18.66■□□□□ 0.58
SFXN2-204ENST00000602287 FAM196BA6NMK8 535 aa18.65■□□□□ 0.58
SFXN2-204ENST00000602287 GJB1P08034 283 aa18.65■□□□□ 0.58
SFXN2-204ENST00000602287 MTFR1Q15390 333 aa18.65■□□□□ 0.58
SFXN2-204ENST00000602287 ITPRIPQ8IWB1 547 aa18.65■□□□□ 0.58
SFXN2-204ENST00000602287 AS3MTQ9HBK9 375 aa18.65■□□□□ 0.58
SFXN2-204ENST00000602287 AATFQ9NY61 560 aaKnown RBP eCLIP18.65■□□□□ 0.58
SFXN2-204ENST00000602287 BIN2Q9UBW5 565 aaPredicted RBP18.65■□□□□ 0.58
SFXN2-204ENST00000602287 USP17L5A8MUK1 530 aa18.64■□□□□ 0.57
SFXN2-204ENST00000602287 TNPO2O14787 897 aaKnown RBP18.64■□□□□ 0.57
SFXN2-204ENST00000602287 ZBTB7BO15156 539 aaPredicted RBP18.64■□□□□ 0.57
SFXN2-204ENST00000602287 CYP2E1P05181 493 aaPredicted RBP18.64■□□□□ 0.57
SFXN2-204ENST00000602287 CCL5P13501 91 aa18.64■□□□□ 0.57
SFXN2-204ENST00000602287 CAPN2P17655 700 aa18.64■□□□□ 0.57
SFXN2-204ENST00000602287 SPP2Q13103 211 aa18.64■□□□□ 0.57
SFXN2-204ENST00000602287 IRF5Q13568 498 aa18.64■□□□□ 0.57
SFXN2-204ENST00000602287 FAM110CQ1W6H9 321 aa18.64■□□□□ 0.57
SFXN2-204ENST00000602287 CERS3Q8IU89 383 aa18.64■□□□□ 0.57
SFXN2-204ENST00000602287 SNRKQ9NRH2 765 aa18.64■□□□□ 0.57
SFXN2-204ENST00000602287 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.64■□□□□ 0.57
SFXN2-204ENST00000602287 DOCK3Q8IZD9 2030 aa18.64■□□□□ 0.57
SFXN2-204ENST00000602287 MYH1P12882 1939 aa18.63■□□□□ 0.57
SFXN2-204ENST00000602287 ASNSP08243 561 aa18.63■□□□□ 0.57
SFXN2-204ENST00000602287 GJA8P48165 433 aa18.63■□□□□ 0.57
SFXN2-204ENST00000602287 GCLCP48506 637 aaPredicted RBP18.63■□□□□ 0.57
SFXN2-204ENST00000602287 SH3D19Q5HYK7 790 aa18.63■□□□□ 0.57
SFXN2-204ENST00000602287 HABP4Q5JVS0 413 aaKnown RBP18.63■□□□□ 0.57
SFXN2-204ENST00000602287 TREML2Q5T2D2 321 aa18.63■□□□□ 0.57
SFXN2-204ENST00000602287 TMED8Q6PL24 325 aaPredicted RBP18.63■□□□□ 0.57
SFXN2-204ENST00000602287 CCDC84Q86UT8 332 aaPredicted RBP18.63■□□□□ 0.57
SFXN2-204ENST00000602287 PXYLP1Q8TE99 480 aa18.63■□□□□ 0.57
SFXN2-204ENST00000602287 SHISA4Q96DD7 197 aa18.63■□□□□ 0.57
SFXN2-204ENST00000602287 C1orf115Q9H7X2 142 aa18.63■□□□□ 0.57
SFXN2-204ENST00000602287 GINM1Q9NU53 330 aa18.63■□□□□ 0.57
SFXN2-204ENST00000602287 ADCY3O60266 1144 aa18.62■□□□□ 0.57
SFXN2-204ENST00000602287 FLT3LGP49771 235 aa18.62■□□□□ 0.57
SFXN2-204ENST00000602287 METTL16Q86W50 562 aaKnown RBP18.62■□□□□ 0.57
SFXN2-204ENST00000602287 FOXP4Q8IVH2 680 aaPredicted RBP18.62■□□□□ 0.57
SFXN2-204ENST00000602287 COA7Q96BR5 231 aa18.62■□□□□ 0.57
SFXN2-204ENST00000602287 RNF208Q9H0X6 261 aa18.62■□□□□ 0.57
SFXN2-204ENST00000602287 DBNLQ9UJU6 430 aaKnown RBP18.62■□□□□ 0.57
SFXN2-204ENST00000602287 GABRQQ9UN88 632 aa18.62■□□□□ 0.57
SFXN2-204ENST00000602287 FLT1P17948 1338 aa18.62■□□□□ 0.57
SFXN2-204ENST00000602287 RLBP1P12271 317 aa18.61■□□□□ 0.57
SFXN2-204ENST00000602287 ZAP70P43403 619 aa18.61■□□□□ 0.57
SFXN2-204ENST00000602287 HMGCS2P54868 508 aa18.61■□□□□ 0.57
SFXN2-204ENST00000602287 ERC1Q8IUD2 1116 aa18.61■□□□□ 0.57
SFXN2-204ENST00000602287 ANKRD13CQ8N6S4 541 aa18.61■□□□□ 0.57
SFXN2-204ENST00000602287 TGFBRAP1Q8WUH2 860 aa18.61■□□□□ 0.57
SFXN2-204ENST00000602287 WDR18Q9BV38 432 aa18.61■□□□□ 0.57
SFXN2-204ENST00000602287 TRIM34Q9BYJ4 488 aa18.61■□□□□ 0.57
SFXN2-204ENST00000602287 ADGRA1Q86SQ6 560 aa18.6■□□□□ 0.57
SFXN2-204ENST00000602287 MAPKAPK5Q8IW41 473 aa18.6■□□□□ 0.57
SFXN2-204ENST00000602287 CRACR2BQ8N4Y2 399 aaPredicted RBP18.6■□□□□ 0.57
SFXN2-204ENST00000602287 HLA-DOAP06340 250 aa18.59■□□□□ 0.57
SFXN2-204ENST00000602287 RRP1BQ14684 758 aaKnown RBP18.59■□□□□ 0.57
SFXN2-204ENST00000602287 CEP85Q6P2H3 762 aa18.59■□□□□ 0.57
SFXN2-204ENST00000602287 EAF2Q96CJ1 260 aaPredicted RBP18.59■□□□□ 0.57
SFXN2-204ENST00000602287 HTATIP2Q9BUP3 242 aa18.59■□□□□ 0.57
SFXN2-204ENST00000602287 MS4A1P11836 297 aa18.58■□□□□ 0.56
SFXN2-204ENST00000602287 BACE1P56817 501 aa18.58■□□□□ 0.56
SFXN2-204ENST00000602287 UBE2Q1Q7Z7E8 422 aa18.58■□□□□ 0.56
SFXN2-204ENST00000602287 U2AF1L4Q8WU68 220 aaKnown RBP18.58■□□□□ 0.56
SFXN2-204ENST00000602287 CCDC8Q9H0W5 538 aaPredicted RBP18.58■□□□□ 0.56
SFXN2-204ENST00000602287 ASCC2Q9H1I8 757 aaPredicted RBP18.58■□□□□ 0.56
SFXN2-204ENST00000602287 PIH1D3Q9NQM4 214 aaKnown RBP18.58■□□□□ 0.56
SFXN2-204ENST00000602287 TLR7Q9NYK1 1049 aaKnown RBP18.58■□□□□ 0.56
SFXN2-204ENST00000602287 TMOD4Q9NZQ9 345 aa18.58■□□□□ 0.56
SFXN2-204ENST00000602287 RANBP2P49792 3224 aaKnown RBP18.57■□□□□ 0.56
SFXN2-204ENST00000602287 C19orf81C9J6K1 198 aa18.57■□□□□ 0.56
SFXN2-204ENST00000602287 IDH1O75874 414 aaKnown RBP18.57■□□□□ 0.56
SFXN2-204ENST00000602287 INHAP05111 366 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms