RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 ZNF277Q9NRM2 450 aaPredicted RBP12.59□□□□□ -0.39
ZNF558-207ENST00000601372 USP17L3A6NCW0 530 aa12.59□□□□□ -0.39
ZNF558-207ENST00000601372 USP17L4A6NCW7 530 aa12.59□□□□□ -0.39
ZNF558-207ENST00000601372 DNA2P51530 1060 aa12.59□□□□□ -0.39
ZNF558-207ENST00000601372 USP17L1Q7RTZ2 530 aa12.59□□□□□ -0.39
ZNF558-207ENST00000601372 KIFC2Q96AC6 838 aa12.59□□□□□ -0.39
ZNF558-207ENST00000601372 SEPT11Q9NVA2 429 aaKnown RBP12.59□□□□□ -0.39
ZNF558-207ENST00000601372 PKD2L1Q9P0L9 805 aa12.59□□□□□ -0.39
ZNF558-207ENST00000601372 A0A0D9SFI3 127 aa12.58□□□□□ -0.39
ZNF558-207ENST00000601372 ENOX2Q16206 610 aaKnown RBP12.58□□□□□ -0.39
ZNF558-207ENST00000601372 HS1BP3Q53T59 392 aa12.58□□□□□ -0.4
ZNF558-207ENST00000601372 SYNE4Q8N205 404 aa12.58□□□□□ -0.4
ZNF558-207ENST00000601372 CCDC150Q8NCX0 1101 aa12.58□□□□□ -0.4
ZNF558-207ENST00000601372 PAXBP1Q9Y5B6 917 aa12.58□□□□□ -0.4
ZNF558-207ENST00000601372 KIF2AO00139 706 aaPredicted RBP12.58□□□□□ -0.4
ZNF558-207ENST00000601372 ERLIN1O75477 346 aa12.58□□□□□ -0.4
ZNF558-207ENST00000601372 ADORA1P30542 326 aa12.58□□□□□ -0.4
ZNF558-207ENST00000601372 ARMC9Q7Z3E5 817 aa12.58□□□□□ -0.4
ZNF558-207ENST00000601372 SEC62Q99442 399 aaKnown RBP12.58□□□□□ -0.4
ZNF558-207ENST00000601372 UBE4AQ14139 1066 aa12.58□□□□□ -0.4
ZNF558-207ENST00000601372 CENPHQ9H3R5 247 aa12.58□□□□□ -0.4
ZNF558-207ENST00000601372 IFNKQ9P0W0 207 aa12.58□□□□□ -0.4
ZNF558-207ENST00000601372 USH1GQ495M9 461 aa12.58□□□□□ -0.4
ZNF558-207ENST00000601372 KIAA1210Q9ULL0 1709 aa12.58□□□□□ -0.4
ZNF558-207ENST00000601372 PDE8BO95263 885 aa12.58□□□□□ -0.4
ZNF558-207ENST00000601372 ZNF853P0CG23 659 aa12.58□□□□□ -0.4
ZNF558-207ENST00000601372 BICD1Q96G01 975 aa12.58□□□□□ -0.4
ZNF558-207ENST00000601372 CBX8Q9HC52 389 aa12.58□□□□□ -0.4
ZNF558-207ENST00000601372 ZMYND15Q9H091 742 aa12.57□□□□□ -0.4
ZNF558-207ENST00000601372 TLR7Q9NYK1 1049 aaKnown RBP12.57□□□□□ -0.4
ZNF558-207ENST00000601372 NRKQ7Z2Y5 1582 aa12.57□□□□□ -0.4
ZNF558-207ENST00000601372 TRERF1Q96PN7 1200 aa12.57□□□□□ -0.4
ZNF558-207ENST00000601372 PHKA1P46020 1223 aa12.57□□□□□ -0.4
ZNF558-207ENST00000601372 CC2D2BQ6DHV5 1058 aa12.57□□□□□ -0.4
ZNF558-207ENST00000601372 TPCN1Q9ULQ1 816 aa12.57□□□□□ -0.4
ZNF558-207ENST00000601372 SPECC1Q5M775 1068 aa12.57□□□□□ -0.4
ZNF558-207ENST00000601372 SLC1A4P43007 532 aa12.56□□□□□ -0.4
ZNF558-207ENST00000601372 FAM47AQ5JRC9 791 aa12.56□□□□□ -0.4
ZNF558-207ENST00000601372 DHX58Q96C10 678 aa12.56□□□□□ -0.4
ZNF558-207ENST00000601372 RBM28Q9NW13 759 aaKnown RBP12.56□□□□□ -0.4
ZNF558-207ENST00000601372 KBTBD3Q8NAB2 608 aa12.56□□□□□ -0.4
ZNF558-207ENST00000601372 SSH3Q8TE77 659 aa12.56□□□□□ -0.4
ZNF558-207ENST00000601372 SDR42E1Q8WUS8 393 aa12.56□□□□□ -0.4
ZNF558-207ENST00000601372 TSG101Q99816 390 aa12.56□□□□□ -0.4
ZNF558-207ENST00000601372 DNAI1Q9UI46 699 aa12.56□□□□□ -0.4
ZNF558-207ENST00000601372 GNG11P61952 73 aa12.56□□□□□ -0.4
ZNF558-207ENST00000601372 ADCK5Q3MIX3 580 aa12.56□□□□□ -0.4
ZNF558-207ENST00000601372 LEO1Q8WVC0 666 aaPredicted RBP12.56□□□□□ -0.4
ZNF558-207ENST00000601372 UBE2Q2Q8WVN8 375 aa12.56□□□□□ -0.4
ZNF558-207ENST00000601372 UBR1Q8IWV7 1749 aa12.56□□□□□ -0.4
ZNF558-207ENST00000601372 NFIXQ14938 502 aa12.56□□□□□ -0.4
ZNF558-207ENST00000601372 FCHSD1Q86WN1 690 aa12.56□□□□□ -0.4
ZNF558-207ENST00000601372 SLIT1O75093 1534 aa12.56□□□□□ -0.4
ZNF558-207ENST00000601372 SYCP3Q8IZU3 236 aa12.56□□□□□ -0.4
ZNF558-207ENST00000601372 ERMNQ8TAM6 284 aa12.56□□□□□ -0.4
ZNF558-207ENST00000601372 GPHNQ9NQX3 736 aaPredicted RBP12.56□□□□□ -0.4
ZNF558-207ENST00000601372 MYCLP12524 364 aaPredicted RBP12.56□□□□□ -0.4
ZNF558-207ENST00000601372 CERKLQ49MI3 558 aaPredicted RBP12.56□□□□□ -0.4
ZNF558-207ENST00000601372 DNAI2Q9GZS0 605 aa12.56□□□□□ -0.4
ZNF558-207ENST00000601372 IGSF3O75054 1194 aa12.55□□□□□ -0.4
ZNF558-207ENST00000601372 EIF3JO75822 258 aaKnown RBP12.55□□□□□ -0.4
ZNF558-207ENST00000601372 SUPT20HL1Q3ZLR7 823 aa12.55□□□□□ -0.4
ZNF558-207ENST00000601372 ZFP91Q96JP5 570 aaPredicted RBP12.55□□□□□ -0.4
ZNF558-207ENST00000601372 FSD2A1L4K1 749 aa12.55□□□□□ -0.4
ZNF558-207ENST00000601372 ZNF397Q8NF99 534 aaPredicted RBP12.55□□□□□ -0.4
ZNF558-207ENST00000601372 LSG1Q9H089 658 aaKnown RBP12.55□□□□□ -0.4
ZNF558-207ENST00000601372 RRAGBQ5VZM2 374 aa12.55□□□□□ -0.4
ZNF558-207ENST00000601372 TSC1Q92574 1164 aa12.55□□□□□ -0.4
ZNF558-207ENST00000601372 CLSTN2Q9H4D0 955 aa12.55□□□□□ -0.4
ZNF558-207ENST00000601372 NOD1Q9Y239 953 aa12.55□□□□□ -0.4
ZNF558-207ENST00000601372 STX17P56962 302 aa12.55□□□□□ -0.4
ZNF558-207ENST00000601372 MYL10Q9BUA6 226 aa12.55□□□□□ -0.4
ZNF558-207ENST00000601372 DRC1Q96MC2 740 aa12.55□□□□□ -0.4
ZNF558-207ENST00000601372 TBC1D10BQ4KMP7 808 aaPredicted RBP12.54□□□□□ -0.4
ZNF558-207ENST00000601372 DHX37Q8IY37 1157 aaKnown RBP12.54□□□□□ -0.4
ZNF558-207ENST00000601372 RASEFQ8IZ41 740 aa12.54□□□□□ -0.4
ZNF558-207ENST00000601372 CSRNP1Q96S65 589 aa12.54□□□□□ -0.4
ZNF558-207ENST00000601372 ARPP21Q9UBL0 812 aaPredicted RBP12.54□□□□□ -0.4
ZNF558-207ENST00000601372 KRT2P35908 639 aa12.54□□□□□ -0.4
ZNF558-207ENST00000601372 UBA7P41226 1012 aa12.54□□□□□ -0.4
ZNF558-207ENST00000601372 EAF2Q96CJ1 260 aaPredicted RBP12.54□□□□□ -0.4
ZNF558-207ENST00000601372 REREQ9P2R6 1566 aa12.54□□□□□ -0.4
ZNF558-207ENST00000601372 BACH1O14867 736 aa12.54□□□□□ -0.4
ZNF558-207ENST00000601372 ECE2O60344 883 aa12.54□□□□□ -0.4
ZNF558-207ENST00000601372 BSDC1Q9NW68 430 aaPredicted RBP12.54□□□□□ -0.4
ZNF558-207ENST00000601372 LRRC7Q96NW7 1537 aa12.54□□□□□ -0.4
ZNF558-207ENST00000601372 SYT10Q6XYQ8 523 aa12.54□□□□□ -0.4
ZNF558-207ENST00000601372 ATP10DQ9P241 1426 aa12.54□□□□□ -0.4
ZNF558-207ENST00000601372 KIF20BQ96Q89 1820 aa12.54□□□□□ -0.4
ZNF558-207ENST00000601372 CIAO1O76071 339 aa12.54□□□□□ -0.4
ZNF558-207ENST00000601372 CNGA1P29973 690 aa12.54□□□□□ -0.4
ZNF558-207ENST00000601372 SLC15A2Q16348 729 aa12.54□□□□□ -0.4
ZNF558-207ENST00000601372 TFAP4Q01664 338 aa12.54□□□□□ -0.4
ZNF558-207ENST00000601372 PABPC4Q13310 644 aaKnown RBP eCLIP12.54□□□□□ -0.4
ZNF558-207ENST00000601372 CAVIN2O95810 425 aa12.53□□□□□ -0.4
ZNF558-207ENST00000601372 IDEP14735 1019 aa12.53□□□□□ -0.4
ZNF558-207ENST00000601372 SPA17Q15506 151 aa12.53□□□□□ -0.4
ZNF558-207ENST00000601372 RGS12O14924 1447 aa12.53□□□□□ -0.4
ZNF558-207ENST00000601372 KARSQ15046 597 aaKnown RBP12.53□□□□□ -0.4
ZNF558-207ENST00000601372 USP17L12C9JPN9 530 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms