RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 RAET1EQ8TD07 263 aa20.83■□□□□ 0.93
SCAF1-204ENST00000601038 SH3RF3Q8TEJ3 882 aaPredicted RBP20.83■□□□□ 0.93
SCAF1-204ENST00000601038 HERC5Q9UII4 1024 aaKnown RBP20.83■□□□□ 0.93
SCAF1-204ENST00000601038 PHIPQ8WWQ0 1821 aa20.83■□□□□ 0.92
SCAF1-204ENST00000601038 PTPRFP10586 1907 aa20.82■□□□□ 0.92
SCAF1-204ENST00000601038 MYPNQ86TC9 1320 aa20.82■□□□□ 0.92
SCAF1-204ENST00000601038 GRK4P32298 578 aa20.82■□□□□ 0.92
SCAF1-204ENST00000601038 CAP2P40123 477 aa20.82■□□□□ 0.92
SCAF1-204ENST00000601038 CCDC84Q86UT8 332 aaPredicted RBP20.82■□□□□ 0.92
SCAF1-204ENST00000601038 TBC1D2Q9BYX2 928 aa20.82■□□□□ 0.92
SCAF1-204ENST00000601038 DHX36Q9H2U1 1008 aaKnown RBP20.82■□□□□ 0.92
SCAF1-204ENST00000601038 AATFQ9NY61 560 aaKnown RBP eCLIP20.82■□□□□ 0.92
SCAF1-204ENST00000601038 PI4KBQ9UBF8 816 aa20.82■□□□□ 0.92
SCAF1-204ENST00000601038 AGTPBP1Q9UPW5 1226 aa20.82■□□□□ 0.92
SCAF1-204ENST00000601038 PROCA1Q8NCQ7 364 aaPredicted RBP20.81■□□□□ 0.92
SCAF1-204ENST00000601038 SMCR8Q8TEV9 937 aaPredicted RBP20.81■□□□□ 0.92
SCAF1-204ENST00000601038 GCC1Q96CN9 775 aa20.81■□□□□ 0.92
SCAF1-204ENST00000601038 DBNLQ9UJU6 430 aaKnown RBP20.81■□□□□ 0.92
SCAF1-204ENST00000601038 ZBED9Q6R2W3 1325 aa20.8■□□□□ 0.92
SCAF1-204ENST00000601038 ZAP70P43403 619 aa20.8■□□□□ 0.92
SCAF1-204ENST00000601038 SPP2Q13103 211 aa20.8■□□□□ 0.92
SCAF1-204ENST00000601038 ADGRA1Q86SQ6 560 aa20.8■□□□□ 0.92
SCAF1-204ENST00000601038 ZNF280CQ8ND82 737 aa20.8■□□□□ 0.92
SCAF1-204ENST00000601038 EAF2Q96CJ1 260 aaPredicted RBP20.8■□□□□ 0.92
SCAF1-204ENST00000601038 PRKCZQ05513 592 aa20.79■□□□□ 0.92
SCAF1-204ENST00000601038 RRP1BQ14684 758 aaKnown RBP20.79■□□□□ 0.92
SCAF1-204ENST00000601038 MTFR1Q15390 333 aa20.79■□□□□ 0.92
SCAF1-204ENST00000601038 CEP85Q6P2H3 762 aa20.79■□□□□ 0.92
SCAF1-204ENST00000601038 TGFBRAP1Q8WUH2 860 aa20.79■□□□□ 0.92
SCAF1-204ENST00000601038 CCDC8Q9H0W5 538 aaPredicted RBP20.79■□□□□ 0.92
SCAF1-204ENST00000601038 PIH1D3Q9NQM4 214 aaKnown RBP20.79■□□□□ 0.92
SCAF1-204ENST00000601038 USP17L5A8MUK1 530 aa20.78■□□□□ 0.92
SCAF1-204ENST00000601038 TREML2Q5T2D2 321 aa20.78■□□□□ 0.92
SCAF1-204ENST00000601038 FOXP4Q8IVH2 680 aaPredicted RBP20.78■□□□□ 0.92
SCAF1-204ENST00000601038 TLR7Q9NYK1 1049 aaKnown RBP20.78■□□□□ 0.92
SCAF1-204ENST00000601038 PNMA3Q9UL41 463 aa20.78■□□□□ 0.92
SCAF1-204ENST00000601038 MGAMO43451 1857 aa20.77■□□□□ 0.92
SCAF1-204ENST00000601038 METTL16Q86W50 562 aaKnown RBP20.77■□□□□ 0.92
SCAF1-204ENST00000601038 MAPKAPK5Q8IW41 473 aa20.77■□□□□ 0.92
SCAF1-204ENST00000601038 AS3MTQ9HBK9 375 aa20.77■□□□□ 0.92
SCAF1-204ENST00000601038 GABRQQ9UN88 632 aa20.77■□□□□ 0.92
SCAF1-204ENST00000601038 MKI67P46013 3256 aaKnown RBP20.77■□□□□ 0.92
SCAF1-204ENST00000601038 FLT1P17948 1338 aa20.77■□□□□ 0.91
SCAF1-204ENST00000601038 HMGCS2P54868 508 aa20.76■□□□□ 0.91
SCAF1-204ENST00000601038 UBXN2AP68543 259 aa20.76■□□□□ 0.91
SCAF1-204ENST00000601038 SH3D19Q5HYK7 790 aa20.76■□□□□ 0.91
SCAF1-204ENST00000601038 ERC1Q8IUD2 1116 aa20.76■□□□□ 0.91
SCAF1-204ENST00000601038 ANKRD13CQ8N6S4 541 aa20.76■□□□□ 0.91
SCAF1-204ENST00000601038 SLAIN1Q8ND83 568 aa20.76■□□□□ 0.91
SCAF1-204ENST00000601038 NKX2-3Q8TAU0 364 aa20.76■□□□□ 0.91
SCAF1-204ENST00000601038 PANK1Q8TE04 598 aa20.76■□□□□ 0.91
SCAF1-204ENST00000601038 BIN2Q9UBW5 565 aaPredicted RBP20.76■□□□□ 0.91
SCAF1-204ENST00000601038 MAST2Q6P0Q8 1798 aa20.76■□□□□ 0.91
SCAF1-204ENST00000601038 MYO5AQ9Y4I1 1855 aaKnown RBP20.75■□□□□ 0.91
SCAF1-204ENST00000601038 TNPO2O14787 897 aaKnown RBP20.75■□□□□ 0.91
SCAF1-204ENST00000601038 GJB1P08034 283 aa20.75■□□□□ 0.91
SCAF1-204ENST00000601038 ASNSP08243 561 aa20.75■□□□□ 0.91
SCAF1-204ENST00000601038 CYP7A1P22680 504 aa20.75■□□□□ 0.91
SCAF1-204ENST00000601038 FLT3LGP49771 235 aa20.75■□□□□ 0.91
SCAF1-204ENST00000601038 PABPC4Q13310 644 aaKnown RBP eCLIP20.75■□□□□ 0.91
SCAF1-204ENST00000601038 FAM110CQ1W6H9 321 aa20.75■□□□□ 0.91
SCAF1-204ENST00000601038 WDR18Q9BV38 432 aa20.75■□□□□ 0.91
SCAF1-204ENST00000601038 PALD1Q9ULE6 856 aa20.75■□□□□ 0.91
SCAF1-204ENST00000601038 BRCA2P51587 3418 aa20.75■□□□□ 0.91
SCAF1-204ENST00000601038 ATAD5Q96QE3 1844 aa20.74■□□□□ 0.91
SCAF1-204ENST00000601038 ADCY3O60266 1144 aa20.74■□□□□ 0.91
SCAF1-204ENST00000601038 IDH1O75874 414 aaKnown RBP20.74■□□□□ 0.91
SCAF1-204ENST00000601038 MS4A1P11836 297 aa20.74■□□□□ 0.91
SCAF1-204ENST00000601038 CCL5P13501 91 aa20.74■□□□□ 0.91
SCAF1-204ENST00000601038 GCLCP48506 637 aaPredicted RBP20.74■□□□□ 0.91
SCAF1-204ENST00000601038 HSP90AB4PQ58FF6 505 aa20.74■□□□□ 0.91
SCAF1-204ENST00000601038 CERS3Q8IU89 383 aa20.74■□□□□ 0.91
SCAF1-204ENST00000601038 CRACR2BQ8N4Y2 399 aaPredicted RBP20.74■□□□□ 0.91
SCAF1-204ENST00000601038 PXYLP1Q8TE99 480 aa20.74■□□□□ 0.91
SCAF1-204ENST00000601038 RNF208Q9H0X6 261 aa20.74■□□□□ 0.91
SCAF1-204ENST00000601038 DNAJC18Q9H819 358 aa20.74■□□□□ 0.91
SCAF1-204ENST00000601038 GINM1Q9NU53 330 aa20.74■□□□□ 0.91
SCAF1-204ENST00000601038 EXOC6BQ9Y2D4 811 aa20.74■□□□□ 0.91
SCAF1-204ENST00000601038 GJA8P48165 433 aa20.73■□□□□ 0.91
SCAF1-204ENST00000601038 DYNLL1P63167 89 aaKnown RBP20.73■□□□□ 0.91
SCAF1-204ENST00000601038 IRF5Q13568 498 aa20.73■□□□□ 0.91
SCAF1-204ENST00000601038 TMED8Q6PL24 325 aaPredicted RBP20.73■□□□□ 0.91
SCAF1-204ENST00000601038 AACSQ86V21 672 aa20.73■□□□□ 0.91
SCAF1-204ENST00000601038 COA7Q96BR5 231 aa20.73■□□□□ 0.91
SCAF1-204ENST00000601038 SHISA4Q96DD7 197 aa20.73■□□□□ 0.91
SCAF1-204ENST00000601038 TRIM34Q9BYJ4 488 aa20.73■□□□□ 0.91
SCAF1-204ENST00000601038 SIPA1L1O43166 1804 aa20.73■□□□□ 0.91
SCAF1-204ENST00000601038 CDK5RAP2Q96SN8 1893 aa20.73■□□□□ 0.91
SCAF1-204ENST00000601038 HLA-DOAP06340 250 aa20.72■□□□□ 0.91
SCAF1-204ENST00000601038 BACE1P56817 501 aa20.72■□□□□ 0.91
SCAF1-204ENST00000601038 ASCC2Q9H1I8 757 aaPredicted RBP20.72■□□□□ 0.91
SCAF1-204ENST00000601038 PCDH10Q9P2E7 1040 aa20.72■□□□□ 0.91
SCAF1-204ENST00000601038 LOC285556D6RIA3 1793 aa20.72■□□□□ 0.91
SCAF1-204ENST00000601038 FOCADQ5VW36 1801 aa20.71■□□□□ 0.91
SCAF1-204ENST00000601038 C19orf81C9J6K1 198 aa20.71■□□□□ 0.91
SCAF1-204ENST00000601038 JAG1P78504 1218 aa20.71■□□□□ 0.91
SCAF1-204ENST00000601038 MAP3K12Q12852 859 aa20.71■□□□□ 0.91
SCAF1-204ENST00000601038 MTMR2Q13614 643 aa20.71■□□□□ 0.91
SCAF1-204ENST00000601038 HABP4Q5JVS0 413 aaKnown RBP20.71■□□□□ 0.91
SCAF1-204ENST00000601038 MAGEB6Q8N7X4 407 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms