RNA–Protein interactions for RNA: ENST00000600940.1

USP29-204, Transcript of ubiquitin specific peptidase 29, humanhuman

TSL 4

Gene USP29, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-204ENST00000600940 DPF3Q92784 378 aa17.04■□□□□ 0.32
USP29-204ENST00000600940 TRIM34Q9BYJ4 488 aa17.04■□□□□ 0.32
USP29-204ENST00000600940 RNF208Q9H0X6 261 aa17.04■□□□□ 0.32
USP29-204ENST00000600940 SNRKQ9NRH2 765 aa17.04■□□□□ 0.32
USP29-204ENST00000600940 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.04■□□□□ 0.32
USP29-204ENST00000600940 TNPO2O14787 897 aaKnown RBP17.03■□□□□ 0.32
USP29-204ENST00000600940 BAG3O95817 575 aa17.03■□□□□ 0.32
USP29-204ENST00000600940 MAP4K4O95819 1239 aaPredicted RBP17.03■□□□□ 0.32
USP29-204ENST00000600940 BCRP11274 1271 aa17.03■□□□□ 0.32
USP29-204ENST00000600940 MAP3K10Q02779 954 aa17.03■□□□□ 0.32
USP29-204ENST00000600940 NAA16Q6N069 864 aaPredicted RBP17.03■□□□□ 0.32
USP29-204ENST00000600940 PNMA3Q9UL41 463 aa17.03■□□□□ 0.32
USP29-204ENST00000600940 SLC45A1Q9Y2W3 748 aa17.03■□□□□ 0.32
USP29-204ENST00000600940 RFX7Q2KHR2 1363 aa17.02■□□□□ 0.32
USP29-204ENST00000600940 MGAMO43451 1857 aa17.02■□□□□ 0.32
USP29-204ENST00000600940 TBC1D12O60347 775 aa17.02■□□□□ 0.32
USP29-204ENST00000600940 SURF6O75683 361 aaKnown RBP17.02■□□□□ 0.32
USP29-204ENST00000600940 CCL5P13501 91 aa17.02■□□□□ 0.32
USP29-204ENST00000600940 MCAMP43121 646 aa17.02■□□□□ 0.32
USP29-204ENST00000600940 SPP2Q13103 211 aa17.02■□□□□ 0.32
USP29-204ENST00000600940 SLAIN1Q8ND83 568 aa17.02■□□□□ 0.32
USP29-204ENST00000600940 OSBPL5Q9H0X9 879 aaPredicted RBP17.02■□□□□ 0.32
USP29-204ENST00000600940 AGTPBP1Q9UPW5 1226 aa17.02■□□□□ 0.32
USP29-204ENST00000600940 ADCY3O60266 1144 aa17.01■□□□□ 0.31
USP29-204ENST00000600940 HNRNPUQ00839 825 aaKnown RBP eCLIP17.01■□□□□ 0.31
USP29-204ENST00000600940 ITPRIPQ8IWB1 547 aa17.01■□□□□ 0.31
USP29-204ENST00000600940 ANKRD13CQ8N6S4 541 aa17.01■□□□□ 0.31
USP29-204ENST00000600940 SH3RF3Q8TEJ3 882 aaPredicted RBP17.01■□□□□ 0.31
USP29-204ENST00000600940 ZNF384Q8TF68 577 aa17.01■□□□□ 0.31
USP29-204ENST00000600940 COA7Q96BR5 231 aa17.01■□□□□ 0.31
USP29-204ENST00000600940 AATFQ9NY61 560 aaKnown RBP eCLIP17.01■□□□□ 0.31
USP29-204ENST00000600940 GABRQQ9UN88 632 aa17.01■□□□□ 0.31
USP29-204ENST00000600940 PLCG2P16885 1265 aa17■□□□□ 0.31
USP29-204ENST00000600940 FLT3LGP49771 235 aa17■□□□□ 0.31
USP29-204ENST00000600940 PABPC4Q13310 644 aaKnown RBP eCLIP17■□□□□ 0.31
USP29-204ENST00000600940 TNNI3KQ59H18 835 aa17■□□□□ 0.31
USP29-204ENST00000600940 CRACR2BQ8N4Y2 399 aaPredicted RBP17■□□□□ 0.31
USP29-204ENST00000600940 ZNF280CQ8ND82 737 aa17■□□□□ 0.31
USP29-204ENST00000600940 C1orf115Q9H7X2 142 aa17■□□□□ 0.31
USP29-204ENST00000600940 AS3MTQ9HBK9 375 aa17■□□□□ 0.31
USP29-204ENST00000600940 PI4KBQ9UBF8 816 aa17■□□□□ 0.31
USP29-204ENST00000600940 FPGT-TNNI3KV9GXZ4 949 aa17■□□□□ 0.31
USP29-204ENST00000600940 PTPRFP10586 1907 aa17■□□□□ 0.31
USP29-204ENST00000600940 USP17L5A8MUK1 530 aa16.99■□□□□ 0.31
USP29-204ENST00000600940 GJB1P08034 283 aa16.99■□□□□ 0.31
USP29-204ENST00000600940 HMGCS2P54868 508 aa16.99■□□□□ 0.31
USP29-204ENST00000600940 ATP8B2P98198 1209 aa16.99■□□□□ 0.31
USP29-204ENST00000600940 TREML2Q5T2D2 321 aa16.99■□□□□ 0.31
USP29-204ENST00000600940 DIEXFQ68CQ4 756 aaKnown RBP16.99■□□□□ 0.31
USP29-204ENST00000600940 DBNDD2Q9BQY9 259 aa16.99■□□□□ 0.31
USP29-204ENST00000600940 TBC1D2Q9BYX2 928 aa16.99■□□□□ 0.31
USP29-204ENST00000600940 HERC5Q9UII4 1024 aaKnown RBP16.99■□□□□ 0.31
USP29-204ENST00000600940 CEP290O15078 2479 aa16.99■□□□□ 0.31
USP29-204ENST00000600940 H0YGN5 161 aa16.98■□□□□ 0.31
USP29-204ENST00000600940 ELNP15502 786 aa16.98■□□□□ 0.31
USP29-204ENST00000600940 CAP2P40123 477 aa16.98■□□□□ 0.31
USP29-204ENST00000600940 GJA8P48165 433 aa16.98■□□□□ 0.31
USP29-204ENST00000600940 MAPKAPK5Q8IW41 473 aa16.98■□□□□ 0.31
USP29-204ENST00000600940 PROCA1Q8NCQ7 364 aaPredicted RBP16.98■□□□□ 0.31
USP29-204ENST00000600940 TGFBRAP1Q8WUH2 860 aa16.98■□□□□ 0.31
USP29-204ENST00000600940 HTATIP2Q9BUP3 242 aa16.98■□□□□ 0.31
USP29-204ENST00000600940 DHX36Q9H2U1 1008 aaKnown RBP16.98■□□□□ 0.31
USP29-204ENST00000600940 GPR108Q9NPR9 543 aa16.98■□□□□ 0.31
USP29-204ENST00000600940 COLQQ9Y215 455 aaPredicted RBP16.98■□□□□ 0.31
USP29-204ENST00000600940 PHIPQ8WWQ0 1821 aa16.98■□□□□ 0.31
USP29-204ENST00000600940 TFRCP02786 760 aaKnown RBP16.97■□□□□ 0.31
USP29-204ENST00000600940 SSH3Q8TE77 659 aa16.97■□□□□ 0.31
USP29-204ENST00000600940 UNC93B1Q9H1C4 597 aa16.97■□□□□ 0.31
USP29-204ENST00000600940 TMOD4Q9NZQ9 345 aa16.97■□□□□ 0.31
USP29-204ENST00000600940 ATAD5Q96QE3 1844 aa16.97■□□□□ 0.31
USP29-204ENST00000600940 INHAP05111 366 aa16.96■□□□□ 0.31
USP29-204ENST00000600940 GCLCP48506 637 aaPredicted RBP16.96■□□□□ 0.31
USP29-204ENST00000600940 FAM110CQ1W6H9 321 aa16.96■□□□□ 0.31
USP29-204ENST00000600940 U2AF1L4Q8WU68 220 aaKnown RBP16.96■□□□□ 0.31
USP29-204ENST00000600940 SHISA4Q96DD7 197 aa16.96■□□□□ 0.31
USP29-204ENST00000600940 SAP30BPQ9UHR5 308 aaKnown RBP16.96■□□□□ 0.31
USP29-204ENST00000600940 COL2A1P02458 1487 aaPredicted RBP16.96■□□□□ 0.31
USP29-204ENST00000600940 IDH1O75874 414 aaKnown RBP16.95■□□□□ 0.3
USP29-204ENST00000600940 FARP2O94887 1054 aaPredicted RBP16.95■□□□□ 0.3
USP29-204ENST00000600940 CYP2E1P05181 493 aaPredicted RBP16.95■□□□□ 0.3
USP29-204ENST00000600940 HLA-DOAP06340 250 aa16.95■□□□□ 0.3
USP29-204ENST00000600940 ASNSP08243 561 aa16.95■□□□□ 0.3
USP29-204ENST00000600940 CYP7A1P22680 504 aa16.95■□□□□ 0.3
USP29-204ENST00000600940 ZAP70P43403 619 aa16.95■□□□□ 0.3
USP29-204ENST00000600940 IRX3P78415 501 aaPredicted RBP16.95■□□□□ 0.3
USP29-204ENST00000600940 PXYLP1Q8TE99 480 aa16.95■□□□□ 0.3
USP29-204ENST00000600940 CCDC8Q9H0W5 538 aaPredicted RBP16.95■□□□□ 0.3
USP29-204ENST00000600940 PALD1Q9ULE6 856 aa16.95■□□□□ 0.3
USP29-204ENST00000600940 SGPL1O95470 568 aa16.94■□□□□ 0.3
USP29-204ENST00000600940 IRF5Q13568 498 aa16.94■□□□□ 0.3
USP29-204ENST00000600940 MTMR2Q13614 643 aa16.94■□□□□ 0.3
USP29-204ENST00000600940 FOXP4Q8IVH2 680 aaPredicted RBP16.94■□□□□ 0.3
USP29-204ENST00000600940 CCAR1Q8IX12 1150 aaKnown RBP16.94■□□□□ 0.3
USP29-204ENST00000600940 DEFB118Q96PH6 123 aa16.94■□□□□ 0.3
USP29-204ENST00000600940 BCL11AQ9H165 835 aa16.94■□□□□ 0.3
USP29-204ENST00000600940 ASCC2Q9H1I8 757 aaPredicted RBP16.94■□□□□ 0.3
USP29-204ENST00000600940 NR2E3Q9Y5X4 410 aa16.94■□□□□ 0.3
USP29-204ENST00000600940 DOCK3Q8IZD9 2030 aa16.94■□□□□ 0.3
USP29-204ENST00000600940 FLT1P17948 1338 aa16.94■□□□□ 0.3
USP29-204ENST00000600940 GDF11O95390 407 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms