RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 ADCY3O60266 1144 aa23.17■■□□□ 1.3
FARP1-229ENST00000600190 MAP4K4O95819 1239 aaPredicted RBP23.17■■□□□ 1.3
FARP1-229ENST00000600190 MCAMP43121 646 aa23.17■■□□□ 1.3
FARP1-229ENST00000600190 FLT3LGP49771 235 aa23.17■■□□□ 1.3
FARP1-229ENST00000600190 AGTPBP1Q9UPW5 1226 aa23.17■■□□□ 1.3
FARP1-229ENST00000600190 PTPRFP10586 1907 aa23.17■■□□□ 1.3
FARP1-229ENST00000600190 FXR1P51114 621 aaKnown RBP eCLIP23.16■■□□□ 1.3
FARP1-229ENST00000600190 SPP2Q13103 211 aa23.16■■□□□ 1.3
FARP1-229ENST00000600190 TREML2Q5T2D2 321 aa23.16■■□□□ 1.3
FARP1-229ENST00000600190 ANKRD13CQ8N6S4 541 aa23.16■■□□□ 1.3
FARP1-229ENST00000600190 OSBPL5Q9H0X9 879 aaPredicted RBP23.16■■□□□ 1.3
FARP1-229ENST00000600190 UNC93B1Q9H1C4 597 aa23.16■■□□□ 1.3
FARP1-229ENST00000600190 CEP290O15078 2479 aa23.15■■□□□ 1.3
FARP1-229ENST00000600190 UQCRFS1P1P0C7P4 283 aa23.15■■□□□ 1.3
FARP1-229ENST00000600190 ELNP15502 786 aa23.15■■□□□ 1.3
FARP1-229ENST00000600190 TEX11Q8IYF3 940 aa23.15■■□□□ 1.3
FARP1-229ENST00000600190 NOL10Q9BSC4 688 aaKnown RBP23.15■■□□□ 1.3
FARP1-229ENST00000600190 PNMA3Q9UL41 463 aa23.15■■□□□ 1.3
FARP1-229ENST00000600190 TAOK2Q9UL54 1235 aa23.15■■□□□ 1.3
FARP1-229ENST00000600190 ZNF280CQ8ND82 737 aa23.14■■□□□ 1.29
FARP1-229ENST00000600190 SH3RF3Q8TEJ3 882 aaPredicted RBP23.14■■□□□ 1.29
FARP1-229ENST00000600190 U2AF1L4Q8WU68 220 aaKnown RBP23.14■■□□□ 1.29
FARP1-229ENST00000600190 SNRKQ9NRH2 765 aa23.14■■□□□ 1.29
FARP1-229ENST00000600190 TMEM57Q8N5G2 664 aa23.13■■□□□ 1.29
FARP1-229ENST00000600190 PROCA1Q8NCQ7 364 aaPredicted RBP23.13■■□□□ 1.29
FARP1-229ENST00000600190 COA7Q96BR5 231 aa23.13■■□□□ 1.29
FARP1-229ENST00000600190 INHAP05111 366 aa23.12■■□□□ 1.29
FARP1-229ENST00000600190 CAP2P40123 477 aa23.12■■□□□ 1.29
FARP1-229ENST00000600190 HMGCS2P54868 508 aa23.12■■□□□ 1.29
FARP1-229ENST00000600190 OS9Q13438 667 aaPredicted RBP23.12■■□□□ 1.29
FARP1-229ENST00000600190 RRP1BQ14684 758 aaKnown RBP23.12■■□□□ 1.29
FARP1-229ENST00000600190 TTC39AQ5SRH9 613 aa23.12■■□□□ 1.29
FARP1-229ENST00000600190 NAA16Q6N069 864 aaPredicted RBP23.12■■□□□ 1.29
FARP1-229ENST00000600190 PXYLP1Q8TE99 480 aa23.12■■□□□ 1.29
FARP1-229ENST00000600190 HTATIP2Q9BUP3 242 aa23.12■■□□□ 1.29
FARP1-229ENST00000600190 AATFQ9NY61 560 aaKnown RBP eCLIP23.12■■□□□ 1.29
FARP1-229ENST00000600190 COL2A1P02458 1487 aaPredicted RBP23.11■■□□□ 1.29
FARP1-229ENST00000600190 SGPL1O95470 568 aa23.11■■□□□ 1.29
FARP1-229ENST00000600190 BAG3O95817 575 aa23.11■■□□□ 1.29
FARP1-229ENST00000600190 IRF5Q13568 498 aa23.11■■□□□ 1.29
FARP1-229ENST00000600190 CCDC158Q5M9N0 1113 aa23.11■■□□□ 1.29
FARP1-229ENST00000600190 CHRDL2Q6WN34 429 aa23.11■■□□□ 1.29
FARP1-229ENST00000600190 UBE2Q1Q7Z7E8 422 aa23.11■■□□□ 1.29
FARP1-229ENST00000600190 TBC1D2Q9BYX2 928 aa23.11■■□□□ 1.29
FARP1-229ENST00000600190 USP17L5A8MUK1 530 aa23.1■■□□□ 1.29
FARP1-229ENST00000600190 FARP2O94887 1054 aaPredicted RBP23.1■■□□□ 1.29
FARP1-229ENST00000600190 PABPC4Q13310 644 aaKnown RBP eCLIP23.1■■□□□ 1.29
FARP1-229ENST00000600190 FAM110CQ1W6H9 321 aa23.1■■□□□ 1.29
FARP1-229ENST00000600190 TNNI3KQ59H18 835 aa23.1■■□□□ 1.29
FARP1-229ENST00000600190 PI4KBQ9UBF8 816 aa23.1■■□□□ 1.29
FARP1-229ENST00000600190 HERC5Q9UII4 1024 aaKnown RBP23.1■■□□□ 1.29
FARP1-229ENST00000600190 FPGT-TNNI3KV9GXZ4 949 aa23.1■■□□□ 1.29
FARP1-229ENST00000600190 ATAD5Q96QE3 1844 aa23.1■■□□□ 1.29
FARP1-229ENST00000600190 TFRCP02786 760 aaKnown RBP23.09■■□□□ 1.29
FARP1-229ENST00000600190 TGFBRAP1Q8WUH2 860 aa23.09■■□□□ 1.29
FARP1-229ENST00000600190 DEFB118Q96PH6 123 aa23.09■■□□□ 1.29
FARP1-229ENST00000600190 DBNDD2Q9BQY9 259 aa23.09■■□□□ 1.29
FARP1-229ENST00000600190 CHMP4BQ9H444 224 aaKnown RBP23.09■■□□□ 1.29
FARP1-229ENST00000600190 AS3MTQ9HBK9 375 aa23.09■■□□□ 1.29
FARP1-229ENST00000600190 GPR108Q9NPR9 543 aa23.09■■□□□ 1.29
FARP1-229ENST00000600190 RANBP2P49792 3224 aaKnown RBP23.08■■□□□ 1.29
FARP1-229ENST00000600190 SZT2Q5T011 3432 aa23.08■■□□□ 1.29
FARP1-229ENST00000600190 SURF6O75683 361 aaKnown RBP23.08■■□□□ 1.29
FARP1-229ENST00000600190 GCLCP48506 637 aaPredicted RBP23.08■■□□□ 1.29
FARP1-229ENST00000600190 POLA2Q14181 598 aa23.08■■□□□ 1.29
FARP1-229ENST00000600190 ITPRIPQ8IWB1 547 aa23.08■■□□□ 1.29
FARP1-229ENST00000600190 DHX36Q9H2U1 1008 aaKnown RBP23.08■■□□□ 1.29
FARP1-229ENST00000600190 CYP2E1P05181 493 aaPredicted RBP23.07■■□□□ 1.28
FARP1-229ENST00000600190 PLCG2P16885 1265 aa23.07■■□□□ 1.28
FARP1-229ENST00000600190 ATP8B2P98198 1209 aa23.07■■□□□ 1.28
FARP1-229ENST00000600190 MAPKAPK5Q8IW41 473 aa23.07■■□□□ 1.28
FARP1-229ENST00000600190 SSH3Q8TE77 659 aa23.07■■□□□ 1.28
FARP1-229ENST00000600190 ASCC2Q9H1I8 757 aaPredicted RBP23.07■■□□□ 1.28
FARP1-229ENST00000600190 C1orf115Q9H7X2 142 aa23.07■■□□□ 1.28
FARP1-229ENST00000600190 PPP4CP60510 307 aa23.06■■□□□ 1.28
FARP1-229ENST00000600190 ADGRA1Q86SQ6 560 aa23.06■■□□□ 1.28
FARP1-229ENST00000600190 TRIM34Q9BYJ4 488 aa23.06■■□□□ 1.28
FARP1-229ENST00000600190 RBM27Q9P2N5 1060 aaKnown RBP23.06■■□□□ 1.28
FARP1-229ENST00000600190 NR2E3Q9Y5X4 410 aa23.06■■□□□ 1.28
FARP1-229ENST00000600190 LOC285556D6RIA3 1793 aa23.06■■□□□ 1.28
FARP1-229ENST00000600190 DOCK3Q8IZD9 2030 aa23.06■■□□□ 1.28
FARP1-229ENST00000600190 MTMR2Q13614 643 aa23.05■■□□□ 1.28
FARP1-229ENST00000600190 SH3D19Q5HYK7 790 aa23.05■■□□□ 1.28
FARP1-229ENST00000600190 CRACR2BQ8N4Y2 399 aaPredicted RBP23.05■■□□□ 1.28
FARP1-229ENST00000600190 FLT1P17948 1338 aa23.05■■□□□ 1.28
FARP1-229ENST00000600190 TRIOBPQ9H2D6 2365 aa23.04■■□□□ 1.28
FARP1-229ENST00000600190 ASNSP08243 561 aa23.04■■□□□ 1.28
FARP1-229ENST00000600190 ZAP70P43403 619 aa23.04■■□□□ 1.28
FARP1-229ENST00000600190 FOXP4Q8IVH2 680 aaPredicted RBP23.04■■□□□ 1.28
FARP1-229ENST00000600190 WDR18Q9BV38 432 aa23.04■■□□□ 1.28
FARP1-229ENST00000600190 PAK6Q9NQU5 681 aaPredicted RBP23.04■■□□□ 1.28
FARP1-229ENST00000600190 TMOD4Q9NZQ9 345 aa23.04■■□□□ 1.28
FARP1-229ENST00000600190 PALD1Q9ULE6 856 aa23.04■■□□□ 1.28
FARP1-229ENST00000600190 BACE1P56817 501 aa23.03■■□□□ 1.28
FARP1-229ENST00000600190 IRX3P78415 501 aaPredicted RBP23.03■■□□□ 1.28
FARP1-229ENST00000600190 JAG1P78504 1218 aa23.03■■□□□ 1.28
FARP1-229ENST00000600190 SAP30BPQ9UHR5 308 aaKnown RBP23.03■■□□□ 1.28
FARP1-229ENST00000600190 MAST2Q6P0Q8 1798 aa23.03■■□□□ 1.28
FARP1-229ENST00000600190 EVI5O60447 810 aa23.02■■□□□ 1.28
FARP1-229ENST00000600190 GDF11O95390 407 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms