RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 U2AF1L4Q8WU68 220 aaKnown RBP26.08■■□□□ 1.77
PNKP-212ENST00000599454 RAI14Q9P0K7 980 aa26.08■■□□□ 1.77
PNKP-212ENST00000599454 FOCADQ5VW36 1801 aa26.08■■□□□ 1.77
PNKP-212ENST00000599454 COA7Q96BR5 231 aa26.07■■□□□ 1.76
PNKP-212ENST00000599454 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.07■■□□□ 1.76
PNKP-212ENST00000599454 SGPL1O95470 568 aa26.06■■□□□ 1.76
PNKP-212ENST00000599454 TRIM27P14373 513 aa26.06■■□□□ 1.76
PNKP-212ENST00000599454 PABPC4Q13310 644 aaKnown RBP eCLIP26.06■■□□□ 1.76
PNKP-212ENST00000599454 FAM110CQ1W6H9 321 aa26.06■■□□□ 1.76
PNKP-212ENST00000599454 PI16Q6UXB8 463 aa26.06■■□□□ 1.76
PNKP-212ENST00000599454 ATF7IPQ6VMQ6 1270 aa26.06■■□□□ 1.76
PNKP-212ENST00000599454 ZNF280CQ8ND82 737 aa26.06■■□□□ 1.76
PNKP-212ENST00000599454 UNC93B1Q9H1C4 597 aa26.06■■□□□ 1.76
PNKP-212ENST00000599454 FARP2O94887 1054 aaPredicted RBP26.05■■□□□ 1.76
PNKP-212ENST00000599454 TBC1D9Q6ZT07 1266 aa26.05■■□□□ 1.76
PNKP-212ENST00000599454 CCDC84Q86UT8 332 aaPredicted RBP26.05■■□□□ 1.76
PNKP-212ENST00000599454 ANKRD13CQ8N6S4 541 aa26.05■■□□□ 1.76
PNKP-212ENST00000599454 NOL10Q9BSC4 688 aaKnown RBP26.05■■□□□ 1.76
PNKP-212ENST00000599454 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.05■■□□□ 1.76
PNKP-212ENST00000599454 HERC5Q9UII4 1024 aaKnown RBP26.05■■□□□ 1.76
PNKP-212ENST00000599454 SIPA1L1O43166 1804 aa26.04■■□□□ 1.76
PNKP-212ENST00000599454 MYO5AQ9Y4I1 1855 aaKnown RBP26.04■■□□□ 1.76
PNKP-212ENST00000599454 FAM196BA6NMK8 535 aa26.04■■□□□ 1.76
PNKP-212ENST00000599454 INHAP05111 366 aa26.04■■□□□ 1.76
PNKP-212ENST00000599454 CAP2P40123 477 aa26.04■■□□□ 1.76
PNKP-212ENST00000599454 MCAMP43121 646 aa26.04■■□□□ 1.76
PNKP-212ENST00000599454 GCLCP48506 637 aaPredicted RBP26.04■■□□□ 1.76
PNKP-212ENST00000599454 TREML2Q5T2D2 321 aa26.04■■□□□ 1.76
PNKP-212ENST00000599454 TEX11Q8IYF3 940 aa26.04■■□□□ 1.76
PNKP-212ENST00000599454 LRP2BPQ9P2M1 347 aa26.04■■□□□ 1.76
PNKP-212ENST00000599454 NR2E3Q9Y5X4 410 aa26.04■■□□□ 1.76
PNKP-212ENST00000599454 PNMA6EA0A0J9YXQ4 647 aa26.03■■□□□ 1.76
PNKP-212ENST00000599454 ELNP15502 786 aa26.03■■□□□ 1.76
PNKP-212ENST00000599454 SPP2Q13103 211 aa26.03■■□□□ 1.76
PNKP-212ENST00000599454 CHRDL2Q6WN34 429 aa26.03■■□□□ 1.76
PNKP-212ENST00000599454 AS3MTQ9HBK9 375 aa26.03■■□□□ 1.76
PNKP-212ENST00000599454 GPR108Q9NPR9 543 aa26.03■■□□□ 1.76
PNKP-212ENST00000599454 USP17L5A8MUK1 530 aa26.02■■□□□ 1.76
PNKP-212ENST00000599454 IGSF3O75054 1194 aa26.02■■□□□ 1.76
PNKP-212ENST00000599454 PLCG2P16885 1265 aa26.02■■□□□ 1.76
PNKP-212ENST00000599454 DHX36Q9H2U1 1008 aaKnown RBP26.02■■□□□ 1.76
PNKP-212ENST00000599454 PI4KBQ9UBF8 816 aa26.02■■□□□ 1.76
PNKP-212ENST00000599454 BAG3O95817 575 aa26.01■■□□□ 1.75
PNKP-212ENST00000599454 FRAT1Q92837 279 aaPredicted RBP26.01■■□□□ 1.75
PNKP-212ENST00000599454 HMGCS2P54868 508 aa26■■□□□ 1.75
PNKP-212ENST00000599454 SH3D19Q5HYK7 790 aa26■■□□□ 1.75
PNKP-212ENST00000599454 PAK6Q9NQU5 681 aaPredicted RBP26■■□□□ 1.75
PNKP-212ENST00000599454 NAA16Q6N069 864 aaPredicted RBP25.99■■□□□ 1.75
PNKP-212ENST00000599454 SH3RF3Q8TEJ3 882 aaPredicted RBP25.99■■□□□ 1.75
PNKP-212ENST00000599454 ALPK3Q96L96 1907 aa25.98■■□□□ 1.75
PNKP-212ENST00000599454 TFRCP02786 760 aaKnown RBP25.98■■□□□ 1.75
PNKP-212ENST00000599454 PPP4CP60510 307 aa25.98■■□□□ 1.75
PNKP-212ENST00000599454 CCDC158Q5M9N0 1113 aa25.98■■□□□ 1.75
PNKP-212ENST00000599454 TTC39AQ5SRH9 613 aa25.98■■□□□ 1.75
PNKP-212ENST00000599454 DEFB118Q96PH6 123 aa25.98■■□□□ 1.75
PNKP-212ENST00000599454 WDR18Q9BV38 432 aa25.98■■□□□ 1.75
PNKP-212ENST00000599454 RBM27Q9P2N5 1060 aaKnown RBP25.98■■□□□ 1.75
PNKP-212ENST00000599454 TAOK2Q9UL54 1235 aa25.98■■□□□ 1.75
PNKP-212ENST00000599454 MYH1P12882 1939 aa25.98■■□□□ 1.75
PNKP-212ENST00000599454 PLXNB2O15031 1838 aa25.98■■□□□ 1.75
PNKP-212ENST00000599454 BCAR3O75815 825 aa25.97■■□□□ 1.75
PNKP-212ENST00000599454 ASNSP08243 561 aa25.97■■□□□ 1.75
PNKP-212ENST00000599454 POLA2Q14181 598 aa25.97■■□□□ 1.75
PNKP-212ENST00000599454 RRP1BQ14684 758 aaKnown RBP25.97■■□□□ 1.75
PNKP-212ENST00000599454 TNNI3KQ59H18 835 aa25.97■■□□□ 1.75
PNKP-212ENST00000599454 CLUAP1Q96AJ1 413 aa25.97■■□□□ 1.75
PNKP-212ENST00000599454 CRISPLD2Q9H0B8 497 aa25.97■■□□□ 1.75
PNKP-212ENST00000599454 ASCC2Q9H1I8 757 aaPredicted RBP25.97■■□□□ 1.75
PNKP-212ENST00000599454 GINM1Q9NU53 330 aa25.97■■□□□ 1.75
PNKP-212ENST00000599454 TNNQ9UQP3 1299 aa25.97■■□□□ 1.75
PNKP-212ENST00000599454 FPGT-TNNI3KV9GXZ4 949 aa25.97■■□□□ 1.75
PNKP-212ENST00000599454 ZBTB7BO15156 539 aaPredicted RBP25.96■■□□□ 1.75
PNKP-212ENST00000599454 ZNF512BQ96KM6 892 aaPredicted RBP25.96■■□□□ 1.75
PNKP-212ENST00000599454 AATFQ9NY61 560 aaKnown RBP eCLIP25.96■■□□□ 1.75
PNKP-212ENST00000599454 HMGCRP04035 888 aa25.95■■□□□ 1.74
PNKP-212ENST00000599454 OS9Q13438 667 aaPredicted RBP25.95■■□□□ 1.74
PNKP-212ENST00000599454 ZKSCAN2Q63HK3 967 aa25.95■■□□□ 1.74
PNKP-212ENST00000599454 FOXP4Q8IVH2 680 aaPredicted RBP25.95■■□□□ 1.74
PNKP-212ENST00000599454 TMEM57Q8N5G2 664 aa25.95■■□□□ 1.74
PNKP-212ENST00000599454 PRO3102Q9H379 93 aa25.95■■□□□ 1.74
PNKP-212ENST00000599454 MORF4L1Q9UBU8 362 aa25.95■■□□□ 1.74
PNKP-212ENST00000599454 BACE1P56817 501 aa25.94■■□□□ 1.74
PNKP-212ENST00000599454 METTL16Q86W50 562 aaKnown RBP25.94■■□□□ 1.74
PNKP-212ENST00000599454 SSH3Q8TE77 659 aa25.94■■□□□ 1.74
PNKP-212ENST00000599454 DBNDD2Q9BQY9 259 aa25.94■■□□□ 1.74
PNKP-212ENST00000599454 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.94■■□□□ 1.74
PNKP-212ENST00000599454 SNRKQ9NRH2 765 aa25.94■■□□□ 1.74
PNKP-212ENST00000599454 TMOD4Q9NZQ9 345 aa25.94■■□□□ 1.74
PNKP-212ENST00000599454 FLT1P17948 1338 aa25.93■■□□□ 1.74
PNKP-212ENST00000599454 C19orf81C9J6K1 198 aa25.93■■□□□ 1.74
PNKP-212ENST00000599454 EVI5O60447 810 aa25.93■■□□□ 1.74
PNKP-212ENST00000599454 HOXA7P31268 230 aaPredicted RBP25.93■■□□□ 1.74
PNKP-212ENST00000599454 IRX3P78415 501 aaPredicted RBP25.93■■□□□ 1.74
PNKP-212ENST00000599454 ATP8B2P98198 1209 aa25.93■■□□□ 1.74
PNKP-212ENST00000599454 ANKLE1Q8NAG6 615 aa25.93■■□□□ 1.74
PNKP-212ENST00000599454 TGFBRAP1Q8WUH2 860 aa25.93■■□□□ 1.74
PNKP-212ENST00000599454 TRIM34Q9BYJ4 488 aa25.93■■□□□ 1.74
PNKP-212ENST00000599454 GJD2Q9UKL4 321 aa25.93■■□□□ 1.74
PNKP-212ENST00000599454 A0A1W2PPC1 479 aa25.92■■□□□ 1.74
PNKP-212ENST00000599454 CYP2E1P05181 493 aaPredicted RBP25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms