RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	CHRND	Q07001	517 aa		13.01	□□□□□ -0.33
SUPT5H-216	ENST00000599335	NIM1K	Q8IY84	436 aa		13.01	□□□□□ -0.33
SUPT5H-216	ENST00000599335	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.01	□□□□□ -0.33
SUPT5H-216	ENST00000599335	RNF113A	O15541	343 aa	Known RBP	13.01	□□□□□ -0.33
SUPT5H-216	ENST00000599335	PAX3	P23760	479 aa		13.01	□□□□□ -0.33
SUPT5H-216	ENST00000599335	HNRNPH2	P55795	449 aa	Known RBP	13.01	□□□□□ -0.33
SUPT5H-216	ENST00000599335	CDC37L1	Q7L3B6	337 aa		13.01	□□□□□ -0.33
SUPT5H-216	ENST00000599335	TAOK3	Q9H2K8	898 aa		13.01	□□□□□ -0.33
SUPT5H-216	ENST00000599335	KIF3C	O14782	793 aa		13.01	□□□□□ -0.33
SUPT5H-216	ENST00000599335	BCAM	P50895	628 aa		13.01	□□□□□ -0.33
SUPT5H-216	ENST00000599335	KRT85	P78386	507 aa		13.01	□□□□□ -0.33
SUPT5H-216	ENST00000599335	SCARF1	Q14162	830 aa		13.01	□□□□□ -0.33
SUPT5H-216	ENST00000599335	PLEKHG2	Q9H7P9	1386 aa		13	□□□□□ -0.33
SUPT5H-216	ENST00000599335	NTSR2	O95665	410 aa		13	□□□□□ -0.33
SUPT5H-216	ENST00000599335	PAX7	P23759	505 aa		13	□□□□□ -0.33
SUPT5H-216	ENST00000599335	ZAP70	P43403	619 aa		13	□□□□□ -0.33
SUPT5H-216	ENST00000599335	PSMD2	Q13200	908 aa		13	□□□□□ -0.33
SUPT5H-216	ENST00000599335	TTC19	Q6DKK2	380 aa	Predicted RBP	13	□□□□□ -0.33
SUPT5H-216	ENST00000599335	RAB11FIP4	Q86YS3	637 aa		13	□□□□□ -0.33
SUPT5H-216	ENST00000599335	ERCC4	Q92889	916 aa	Predicted RBP	13	□□□□□ -0.33
SUPT5H-216	ENST00000599335	ZNF609	O15014	1411 aa		13	□□□□□ -0.33
SUPT5H-216	ENST00000599335	APOBR	Q0VD83	1088 aa		13	□□□□□ -0.33
SUPT5H-216	ENST00000599335	GPS2	Q13227	327 aa		13	□□□□□ -0.33
SUPT5H-216	ENST00000599335	KRT222	Q8N1A0	295 aa		13	□□□□□ -0.33
SUPT5H-216	ENST00000599335	MED23	Q9ULK4	1368 aa		13	□□□□□ -0.33
SUPT5H-216	ENST00000599335	TOB2	Q14106	344 aa	Predicted RBP	13	□□□□□ -0.33
SUPT5H-216	ENST00000599335	DZIP1	Q86YF9	867 aa	Known RBP	13	□□□□□ -0.33
SUPT5H-216	ENST00000599335	NOP2	P46087	812 aa	Known RBP	12.99	□□□□□ -0.33
SUPT5H-216	ENST00000599335	EIF6	P56537	245 aa	Known RBP	12.99	□□□□□ -0.33
SUPT5H-216	ENST00000599335	UBE2H	P62256	183 aa		12.99	□□□□□ -0.33
SUPT5H-216	ENST00000599335	GUCY1B3	Q02153	619 aa		12.99	□□□□□ -0.33
SUPT5H-216	ENST00000599335	OGFOD1	Q8N543	542 aa		12.99	□□□□□ -0.33
SUPT5H-216	ENST00000599335	TERF2	Q15554	542 aa		12.99	□□□□□ -0.33
SUPT5H-216	ENST00000599335	IL17RA	Q96F46	866 aa		12.99	□□□□□ -0.33
SUPT5H-216	ENST00000599335	HELLS	Q9NRZ9	838 aa		12.99	□□□□□ -0.33
SUPT5H-216	ENST00000599335	CSF1R	P07333	972 aa		12.99	□□□□□ -0.33
SUPT5H-216	ENST00000599335	HSPD1	P10809	573 aa	Known RBP	12.99	□□□□□ -0.33
SUPT5H-216	ENST00000599335	ABCD1	P33897	745 aa		12.99	□□□□□ -0.33
SUPT5H-216	ENST00000599335	NOLC1	Q14978	699 aa	Known RBP eCLIP	12.99	□□□□□ -0.33
SUPT5H-216	ENST00000599335	GIMAP6	Q6P9H5	292 aa		12.99	□□□□□ -0.33
SUPT5H-216	ENST00000599335	RALYL	Q86SE5	291 aa	Known RBP	12.99	□□□□□ -0.33
SUPT5H-216	ENST00000599335	BICD2	Q8TD16	824 aa		12.99	□□□□□ -0.33
SUPT5H-216	ENST00000599335	CAMK4	Q16566	473 aa		12.98	□□□□□ -0.33
SUPT5H-216	ENST00000599335	HS1BP3	Q53T59	392 aa		12.98	□□□□□ -0.33
SUPT5H-216	ENST00000599335	CCDC93	Q567U6	631 aa		12.98	□□□□□ -0.33
SUPT5H-216	ENST00000599335	MSL3	Q8N5Y2	521 aa	Known RBP	12.98	□□□□□ -0.33
SUPT5H-216	ENST00000599335	MXD3	Q9BW11	206 aa		12.98	□□□□□ -0.33
SUPT5H-216	ENST00000599335	ABCC12	Q96J65	1359 aa		12.98	□□□□□ -0.33
SUPT5H-216	ENST00000599335	ST3GAL1	Q11201	340 aa		12.98	□□□□□ -0.33
SUPT5H-216	ENST00000599335	PICALM	Q13492	652 aa		12.98	□□□□□ -0.33
SUPT5H-216	ENST00000599335	CCDC183	Q5T5S1	534 aa		12.98	□□□□□ -0.33
SUPT5H-216	ENST00000599335	DPY19L2	Q6NUT2	758 aa		12.98	□□□□□ -0.33
SUPT5H-216	ENST00000599335	GPR108	Q9NPR9	543 aa		12.98	□□□□□ -0.33
SUPT5H-216	ENST00000599335	MAST3	O60307	1309 aa		12.98	□□□□□ -0.33
SUPT5H-216	ENST00000599335	ATP2B2	Q01814	1243 aa		12.98	□□□□□ -0.33
SUPT5H-216	ENST00000599335	DHX32	Q7L7V1	743 aa	Known RBP	12.98	□□□□□ -0.33
SUPT5H-216	ENST00000599335	SPATA32	Q96LK8	384 aa		12.98	□□□□□ -0.33
SUPT5H-216	ENST00000599335	NCOA5	Q9HCD5	579 aa	Known RBP	12.98	□□□□□ -0.33
SUPT5H-216	ENST00000599335		M0R2C6	588 aa		12.97	□□□□□ -0.33
SUPT5H-216	ENST00000599335	CIAO1	O76071	339 aa		12.97	□□□□□ -0.33
SUPT5H-216	ENST00000599335	GRAP	Q13588	217 aa		12.97	□□□□□ -0.33
SUPT5H-216	ENST00000599335	IMMT	Q16891	758 aa	Known RBP	12.97	□□□□□ -0.33
SUPT5H-216	ENST00000599335	ZMYM1	Q5SVZ6	1142 aa		12.97	□□□□□ -0.33
SUPT5H-216	ENST00000599335	GRAPL	Q8TC17	118 aa	Predicted RBP	12.97	□□□□□ -0.33
SUPT5H-216	ENST00000599335	KCNB2	Q92953	911 aa		12.97	□□□□□ -0.33
SUPT5H-216	ENST00000599335	OSBP2	Q969R2	916 aa		12.97	□□□□□ -0.33
SUPT5H-216	ENST00000599335	SLC24A3	Q9HC58	644 aa		12.97	□□□□□ -0.33
SUPT5H-216	ENST00000599335	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	12.97	□□□□□ -0.33	2e-7	■■■■□ 19.9
SUPT5H-216	ENST00000599335	RIPOR2	Q9Y4F9	1068 aa		12.97	□□□□□ -0.33
SUPT5H-216	ENST00000599335	SLC9C2	Q5TAH2	1124 aa		12.97	□□□□□ -0.33
SUPT5H-216	ENST00000599335	JMY	Q8N9B5	988 aa		12.97	□□□□□ -0.33
SUPT5H-216	ENST00000599335	MIGA1	Q8NAN2	632 aa		12.97	□□□□□ -0.33
SUPT5H-216	ENST00000599335	TSPAN18	Q96SJ8	248 aa		12.97	□□□□□ -0.33
SUPT5H-216	ENST00000599335	LMOD1	P29536	600 aa	Predicted RBP	12.96	□□□□□ -0.33
SUPT5H-216	ENST00000599335	HIBADH	P31937	336 aa	Known RBP	12.96	□□□□□ -0.33
SUPT5H-216	ENST00000599335	MNAT1	P51948	309 aa		12.96	□□□□□ -0.33
SUPT5H-216	ENST00000599335	C9orf131	Q5VYM1	1079 aa		12.96	□□□□□ -0.33
SUPT5H-216	ENST00000599335	JAKMIP3	Q5VZ66	844 aa		12.96	□□□□□ -0.33
SUPT5H-216	ENST00000599335	UBR2	Q8IWV8	1755 aa		12.96	□□□□□ -0.33
SUPT5H-216	ENST00000599335		E7EWF7	191 aa		12.96	□□□□□ -0.33
SUPT5H-216	ENST00000599335	SRGN	P10124	158 aa		12.96	□□□□□ -0.33
SUPT5H-216	ENST00000599335	MCM5	P33992	734 aa		12.96	□□□□□ -0.33
SUPT5H-216	ENST00000599335	PHKA1	P46020	1223 aa		12.96	□□□□□ -0.33
SUPT5H-216	ENST00000599335	TRDN	Q13061	729 aa		12.96	□□□□□ -0.33
SUPT5H-216	ENST00000599335	STOX1	Q6ZVD7	989 aa		12.96	□□□□□ -0.33
SUPT5H-216	ENST00000599335	EYA3	Q99504	573 aa		12.96	□□□□□ -0.33
SUPT5H-216	ENST00000599335	CTNNA3	Q9UI47	895 aa		12.96	□□□□□ -0.33
SUPT5H-216	ENST00000599335	ARFGEF2	Q9Y6D5	1785 aa		12.96	□□□□□ -0.34
SUPT5H-216	ENST00000599335	RIOK3	O14730	519 aa	Known RBP	12.96	□□□□□ -0.34
SUPT5H-216	ENST00000599335	CPLX1	O14810	134 aa		12.96	□□□□□ -0.34
SUPT5H-216	ENST00000599335	TPM1	P09493	284 aa		12.96	□□□□□ -0.34
SUPT5H-216	ENST00000599335	SLFN14	P0C7P3	912 aa		12.96	□□□□□ -0.34
SUPT5H-216	ENST00000599335	ZNF280D	Q6N043	979 aa		12.96	□□□□□ -0.34
SUPT5H-216	ENST00000599335	N4BP2	Q86UW6	1770 aa	Predicted RBP	12.95	□□□□□ -0.34
SUPT5H-216	ENST00000599335	GPSM2	P81274	684 aa		12.95	□□□□□ -0.34
SUPT5H-216	ENST00000599335	TCP10	Q12799	353 aa		12.95	□□□□□ -0.34
SUPT5H-216	ENST00000599335	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	12.95	□□□□□ -0.34
SUPT5H-216	ENST00000599335	PIAS4	Q8N2W9	510 aa	Predicted RBP	12.95	□□□□□ -0.34
SUPT5H-216	ENST00000599335	GTF3C6	Q969F1	213 aa		12.95	□□□□□ -0.34
SUPT5H-216	ENST00000599335	NWD2	Q9ULI1	1742 aa		12.95	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 12 ms