RNA–Protein interactions for RNA: ENST00000598452.1

SNRPA-204, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-204ENST00000598452 TREML2Q5T2D2 321 aa23.18■■□□□ 1.3
SNRPA-204ENST00000598452 ADGRA1Q86SQ6 560 aa23.18■■□□□ 1.3
SNRPA-204ENST00000598452 TLR7Q9NYK1 1049 aaKnown RBP23.18■■□□□ 1.3
SNRPA-204ENST00000598452 GABRQQ9UN88 632 aa23.18■■□□□ 1.3
SNRPA-204ENST00000598452 SLC45A1Q9Y2W3 748 aa23.18■■□□□ 1.3
SNRPA-204ENST00000598452 DOCK1Q14185 1865 aa23.17■■□□□ 1.3
SNRPA-204ENST00000598452 SPP2Q13103 211 aa23.17■■□□□ 1.3
SNRPA-204ENST00000598452 SMCR8Q8TEV9 937 aaPredicted RBP23.17■■□□□ 1.3
SNRPA-204ENST00000598452 NOL10Q9BSC4 688 aaKnown RBP23.17■■□□□ 1.3
SNRPA-204ENST00000598452 CCDC8Q9H0W5 538 aaPredicted RBP23.17■■□□□ 1.3
SNRPA-204ENST00000598452 NOP58Q9Y2X3 529 aaKnown RBP23.17■■□□□ 1.3
SNRPA-204ENST00000598452 COL2A1P02458 1487 aaPredicted RBP23.17■■□□□ 1.3
SNRPA-204ENST00000598452 CAP2P40123 477 aa23.16■■□□□ 1.3
SNRPA-204ENST00000598452 ZAP70P43403 619 aa23.16■■□□□ 1.3
SNRPA-204ENST00000598452 PIH1D3Q9NQM4 214 aaKnown RBP23.16■■□□□ 1.3
SNRPA-204ENST00000598452 DBNLQ9UJU6 430 aaKnown RBP23.16■■□□□ 1.3
SNRPA-204ENST00000598452 AGTPBP1Q9UPW5 1226 aa23.16■■□□□ 1.3
SNRPA-204ENST00000598452 BAG3O95817 575 aa23.15■■□□□ 1.3
SNRPA-204ENST00000598452 MAPKAPK5Q8IW41 473 aa23.15■■□□□ 1.3
SNRPA-204ENST00000598452 TGFBRAP1Q8WUH2 860 aa23.15■■□□□ 1.3
SNRPA-204ENST00000598452 EAF2Q96CJ1 260 aaPredicted RBP23.15■■□□□ 1.3
SNRPA-204ENST00000598452 SHISA4Q96DD7 197 aa23.15■■□□□ 1.3
SNRPA-204ENST00000598452 BIN2Q9UBW5 565 aaPredicted RBP23.15■■□□□ 1.3
SNRPA-204ENST00000598452 PHIPQ8WWQ0 1821 aa23.15■■□□□ 1.3
SNRPA-204ENST00000598452 PPP4CP60510 307 aa23.14■■□□□ 1.29
SNRPA-204ENST00000598452 DIEXFQ68CQ4 756 aaKnown RBP23.14■■□□□ 1.29
SNRPA-204ENST00000598452 ZNF280CQ8ND82 737 aa23.14■■□□□ 1.29
SNRPA-204ENST00000598452 ZNF512BQ96KM6 892 aaPredicted RBP23.14■■□□□ 1.29
SNRPA-204ENST00000598452 CCL5P13501 91 aa23.13■■□□□ 1.29
SNRPA-204ENST00000598452 HMGCS2P54868 508 aa23.13■■□□□ 1.29
SNRPA-204ENST00000598452 ANKRD13CQ8N6S4 541 aa23.13■■□□□ 1.29
SNRPA-204ENST00000598452 PANK1Q8TE04 598 aa23.13■■□□□ 1.29
SNRPA-204ENST00000598452 GCC1Q96CN9 775 aa23.13■■□□□ 1.29
SNRPA-204ENST00000598452 PI4KBQ9UBF8 816 aa23.13■■□□□ 1.29
SNRPA-204ENST00000598452 HERC5Q9UII4 1024 aaKnown RBP23.13■■□□□ 1.29
SNRPA-204ENST00000598452 PTPRFP10586 1907 aa23.12■■□□□ 1.29
SNRPA-204ENST00000598452 PLCG2P16885 1265 aa23.12■■□□□ 1.29
SNRPA-204ENST00000598452 FLT3LGP49771 235 aa23.12■■□□□ 1.29
SNRPA-204ENST00000598452 DYNLL1P63167 89 aaKnown RBP23.12■■□□□ 1.29
SNRPA-204ENST00000598452 JAG1P78504 1218 aa23.12■■□□□ 1.29
SNRPA-204ENST00000598452 CEP85Q6P2H3 762 aa23.12■■□□□ 1.29
SNRPA-204ENST00000598452 NDUFB9Q9Y6M9 179 aa23.12■■□□□ 1.29
SNRPA-204ENST00000598452 FLT1P17948 1338 aa23.11■■□□□ 1.29
SNRPA-204ENST00000598452 USP17L5A8MUK1 530 aa23.11■■□□□ 1.29
SNRPA-204ENST00000598452 TNPO2O14787 897 aaKnown RBP23.11■■□□□ 1.29
SNRPA-204ENST00000598452 IGSF3O75054 1194 aa23.11■■□□□ 1.29
SNRPA-204ENST00000598452 SHROOM1Q2M3G4 852 aaPredicted RBP23.11■■□□□ 1.29
SNRPA-204ENST00000598452 HABP4Q5JVS0 413 aaKnown RBP23.11■■□□□ 1.29
SNRPA-204ENST00000598452 PROCA1Q8NCQ7 364 aaPredicted RBP23.11■■□□□ 1.29
SNRPA-204ENST00000598452 RNF208Q9H0X6 261 aa23.11■■□□□ 1.29
SNRPA-204ENST00000598452 DHX36Q9H2U1 1008 aaKnown RBP23.11■■□□□ 1.29
SNRPA-204ENST00000598452 DNAJC18Q9H819 358 aa23.11■■□□□ 1.29
SNRPA-204ENST00000598452 PALD1Q9ULE6 856 aa23.11■■□□□ 1.29
SNRPA-204ENST00000598452 ADCY3O60266 1144 aa23.1■■□□□ 1.29
SNRPA-204ENST00000598452 ELNP15502 786 aa23.1■■□□□ 1.29
SNRPA-204ENST00000598452 CYP7A1P22680 504 aa23.1■■□□□ 1.29
SNRPA-204ENST00000598452 UBXN2AP68543 259 aa23.1■■□□□ 1.29
SNRPA-204ENST00000598452 SLAIN1Q8ND83 568 aa23.1■■□□□ 1.29
SNRPA-204ENST00000598452 SAP30BPQ9UHR5 308 aaKnown RBP23.1■■□□□ 1.29
SNRPA-204ENST00000598452 PNMA3Q9UL41 463 aa23.1■■□□□ 1.29
SNRPA-204ENST00000598452 EXOC6BQ9Y2D4 811 aa23.1■■□□□ 1.29
SNRPA-204ENST00000598452 IDH1O75874 414 aaKnown RBP23.09■■□□□ 1.29
SNRPA-204ENST00000598452 GJB1P08034 283 aa23.09■■□□□ 1.29
SNRPA-204ENST00000598452 TBC1D2Q9BYX2 928 aa23.09■■□□□ 1.29
SNRPA-204ENST00000598452 UNC93B1Q9H1C4 597 aa23.09■■□□□ 1.29
SNRPA-204ENST00000598452 MAST2Q6P0Q8 1798 aa23.09■■□□□ 1.29
SNRPA-204ENST00000598452 GJA8P48165 433 aa23.08■■□□□ 1.29
SNRPA-204ENST00000598452 SH3D19Q5HYK7 790 aa23.08■■□□□ 1.29
SNRPA-204ENST00000598452 CRACR2BQ8N4Y2 399 aaPredicted RBP23.08■■□□□ 1.29
SNRPA-204ENST00000598452 MIGA1Q8NAN2 632 aa23.08■■□□□ 1.29
SNRPA-204ENST00000598452 ASCC2Q9H1I8 757 aaPredicted RBP23.08■■□□□ 1.29
SNRPA-204ENST00000598452 AS3MTQ9HBK9 375 aa23.08■■□□□ 1.29
SNRPA-204ENST00000598452 TAOK2Q9UL54 1235 aa23.08■■□□□ 1.29
SNRPA-204ENST00000598452 ZBED9Q6R2W3 1325 aa23.08■■□□□ 1.28
SNRPA-204ENST00000598452 MGAMO43451 1857 aa23.07■■□□□ 1.28
SNRPA-204ENST00000598452 GDF11O95390 407 aa23.07■■□□□ 1.28
SNRPA-204ENST00000598452 MTMR2Q13614 643 aa23.07■■□□□ 1.28
SNRPA-204ENST00000598452 FAM110CQ1W6H9 321 aa23.07■■□□□ 1.28
SNRPA-204ENST00000598452 AACSQ86V21 672 aa23.07■■□□□ 1.28
SNRPA-204ENST00000598452 METTL16Q86W50 562 aaKnown RBP23.07■■□□□ 1.28
SNRPA-204ENST00000598452 FOXP4Q8IVH2 680 aaPredicted RBP23.07■■□□□ 1.28
SNRPA-204ENST00000598452 NKX2-3Q8TAU0 364 aa23.07■■□□□ 1.28
SNRPA-204ENST00000598452 ANTXR1Q9H6X2 564 aa23.07■■□□□ 1.28
SNRPA-204ENST00000598452 SIPA1L1O43166 1804 aa23.07■■□□□ 1.28
SNRPA-204ENST00000598452 H0YGN5 161 aa23.06■■□□□ 1.28
SNRPA-204ENST00000598452 INHAP05111 366 aa23.06■■□□□ 1.28
SNRPA-204ENST00000598452 ASNSP08243 561 aa23.06■■□□□ 1.28
SNRPA-204ENST00000598452 MAGEB6Q8N7X4 407 aa23.06■■□□□ 1.28
SNRPA-204ENST00000598452 U2AF1L4Q8WU68 220 aaKnown RBP23.06■■□□□ 1.28
SNRPA-204ENST00000598452 COA7Q96BR5 231 aa23.06■■□□□ 1.28
SNRPA-204ENST00000598452 WDR18Q9BV38 432 aa23.06■■□□□ 1.28
SNRPA-204ENST00000598452 TRIM34Q9BYJ4 488 aa23.06■■□□□ 1.28
SNRPA-204ENST00000598452 MYO5AQ9Y4I1 1855 aaKnown RBP23.05■■□□□ 1.28
SNRPA-204ENST00000598452 GCLCP48506 637 aaPredicted RBP23.05■■□□□ 1.28
SNRPA-204ENST00000598452 PABPC4Q13310 644 aaKnown RBP eCLIP23.05■■□□□ 1.28
SNRPA-204ENST00000598452 IRF5Q13568 498 aa23.05■■□□□ 1.28
SNRPA-204ENST00000598452 PXYLP1Q8TE99 480 aa23.05■■□□□ 1.28
SNRPA-204ENST00000598452 IL1RAPL2Q9NP60 686 aa23.05■■□□□ 1.28
SNRPA-204ENST00000598452 ATAD5Q96QE3 1844 aa23.05■■□□□ 1.28
SNRPA-204ENST00000598452 MS4A1P11836 297 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms