RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 DUOX1Q9NRD9 1551 aa19.89■□□□□ 0.77
SHKBP1-216ENST00000598201 FGRP09769 529 aa19.88■□□□□ 0.77
SHKBP1-216ENST00000598201 CYP2D6P10635 497 aa19.88■□□□□ 0.77
SHKBP1-216ENST00000598201 DALRD3Q5D0E6 543 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-216ENST00000598201 OLFM4Q6UX06 510 aa19.88■□□□□ 0.77
SHKBP1-216ENST00000598201 MTA3Q9BTC8 594 aa19.88■□□□□ 0.77
SHKBP1-216ENST00000598201 ATP8A2Q9NTI2 1148 aa19.88■□□□□ 0.77
SHKBP1-216ENST00000598201 LTBP1Q14766 1721 aa19.88■□□□□ 0.77
SHKBP1-216ENST00000598201 LRRC37AA6NMS7 1700 aa19.88■□□□□ 0.77
SHKBP1-216ENST00000598201 C6orf229H3BNL8 230 aa19.88■□□□□ 0.77
SHKBP1-216ENST00000598201 CEBPZQ03701 1054 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-216ENST00000598201 SEC23AQ15436 765 aa19.88■□□□□ 0.77
SHKBP1-216ENST00000598201 PGBD1Q96JS3 809 aa19.88■□□□□ 0.77
SHKBP1-216ENST00000598201 ATP6V0A2Q9Y487 856 aa19.88■□□□□ 0.77
SHKBP1-216ENST00000598201 ERICH2A1L162 156 aa19.87■□□□□ 0.77
SHKBP1-216ENST00000598201 NASPP49321 788 aaPredicted RBP19.87■□□□□ 0.77
SHKBP1-216ENST00000598201 UBAC1Q9BSL1 405 aa19.87■□□□□ 0.77
SHKBP1-216ENST00000598201 NID2Q14112 1375 aa19.87■□□□□ 0.77
SHKBP1-216ENST00000598201 TNKSO95271 1327 aa19.87■□□□□ 0.77
SHKBP1-216ENST00000598201 UBE2Q2LH0YL09 131 aa19.87■□□□□ 0.77
SHKBP1-216ENST00000598201 CDKL5O76039 1030 aa19.87■□□□□ 0.77
SHKBP1-216ENST00000598201 LIG1P18858 919 aa19.87■□□□□ 0.77
SHKBP1-216ENST00000598201 TMC4Q7Z404 712 aa19.87■□□□□ 0.77
SHKBP1-216ENST00000598201 SH3RF3Q8TEJ3 882 aaPredicted RBP19.87■□□□□ 0.77
SHKBP1-216ENST00000598201 USP28Q96RU2 1077 aa19.87■□□□□ 0.77
SHKBP1-216ENST00000598201 CFAP45Q9UL16 551 aa19.87■□□□□ 0.77
SHKBP1-216ENST00000598201 BCS1LQ9Y276 419 aa19.87■□□□□ 0.77
SHKBP1-216ENST00000598201 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.87■□□□□ 0.77
SHKBP1-216ENST00000598201 MYH15Q9Y2K3 1946 aa19.86■□□□□ 0.77
SHKBP1-216ENST00000598201 ALG1Q9BT22 464 aa19.86■□□□□ 0.77
SHKBP1-216ENST00000598201 MKRN1Q9UHC7 482 aaKnown RBP19.86■□□□□ 0.77
SHKBP1-216ENST00000598201 MYH2Q9UKX2 1941 aa19.86■□□□□ 0.77
SHKBP1-216ENST00000598201 USP17L8P0C7I0 530 aa19.85■□□□□ 0.77
SHKBP1-216ENST00000598201 SLC4A8Q2Y0W8 1093 aa19.85■□□□□ 0.77
SHKBP1-216ENST00000598201 SBK1Q52WX2 424 aa19.85■□□□□ 0.77
SHKBP1-216ENST00000598201 CPLX2Q6PUV4 134 aaKnown RBP19.85■□□□□ 0.77
SHKBP1-216ENST00000598201 SYNE3Q6ZMZ3 975 aa19.85■□□□□ 0.77
SHKBP1-216ENST00000598201 ENAHQ8N8S7 591 aaPredicted RBP19.85■□□□□ 0.77
SHKBP1-216ENST00000598201 BRCA1P38398 1863 aaKnown RBP19.85■□□□□ 0.77
SHKBP1-216ENST00000598201 KIF28PB7ZC32 967 aa19.85■□□□□ 0.77
SHKBP1-216ENST00000598201 IGSF3O75054 1194 aa19.85■□□□□ 0.77
SHKBP1-216ENST00000598201 IARSP41252 1262 aaKnown RBP19.85■□□□□ 0.77
SHKBP1-216ENST00000598201 GSTO1P78417 241 aa19.85■□□□□ 0.77
SHKBP1-216ENST00000598201 ZNF654Q8IZM8 581 aa19.85■□□□□ 0.77
SHKBP1-216ENST00000598201 TMTC2Q8N394 836 aa19.85■□□□□ 0.77
SHKBP1-216ENST00000598201 ZSCAN10Q96SZ4 725 aaPredicted RBP19.85■□□□□ 0.77
SHKBP1-216ENST00000598201 ZNF219Q9P2Y4 722 aaPredicted RBP19.85■□□□□ 0.77
SHKBP1-216ENST00000598201 ARPP21Q9UBL0 812 aaPredicted RBP19.85■□□□□ 0.77
SHKBP1-216ENST00000598201 SLX4Q8IY92 1834 aa19.85■□□□□ 0.77
SHKBP1-216ENST00000598201 PCP11498 1178 aaKnown RBP19.84■□□□□ 0.77
SHKBP1-216ENST00000598201 RTFDC1Q9BY42 306 aaPredicted RBP19.84■□□□□ 0.77
SHKBP1-216ENST00000598201 TSPY26PQ9H489 355 aa19.84■□□□□ 0.77
SHKBP1-216ENST00000598201 MCM9Q9NXL9 1143 aa19.84■□□□□ 0.77
SHKBP1-216ENST00000598201 RCOR1Q9UKL0 485 aa19.84■□□□□ 0.77
SHKBP1-216ENST00000598201 MROH7-TTC4A0A0A0MT08 1334 aa19.84■□□□□ 0.77
SHKBP1-216ENST00000598201 RIMBP2O15034 1052 aa19.83■□□□□ 0.77
SHKBP1-216ENST00000598201 C21orf2O43822 256 aa19.83■□□□□ 0.77
SHKBP1-216ENST00000598201 POLR3DP05423 398 aaPredicted RBP19.83■□□□□ 0.77
SHKBP1-216ENST00000598201 PPP4CP60510 307 aa19.83■□□□□ 0.77
SHKBP1-216ENST00000598201 RTN1Q16799 776 aa19.83■□□□□ 0.77
SHKBP1-216ENST00000598201 C7orf43Q8WVR3 580 aa19.83■□□□□ 0.77
SHKBP1-216ENST00000598201 SLC26A6Q9BXS9 759 aa19.83■□□□□ 0.77
SHKBP1-216ENST00000598201 GOLGA6L4A6NEF3 574 aa19.83■□□□□ 0.76
SHKBP1-216ENST00000598201 ORC4O43929 436 aa19.83■□□□□ 0.76
SHKBP1-216ENST00000598201 IFNAR1P17181 557 aa19.83■□□□□ 0.76
SHKBP1-216ENST00000598201 KIF23Q02241 960 aaPredicted RBP19.83■□□□□ 0.76
SHKBP1-216ENST00000598201 MFSD14BQ5SR56 506 aa19.83■□□□□ 0.76
SHKBP1-216ENST00000598201 NUP133Q8WUM0 1156 aa19.83■□□□□ 0.76
SHKBP1-216ENST00000598201 ZNF396Q96N95 335 aaPredicted RBP19.83■□□□□ 0.76
SHKBP1-216ENST00000598201 TAOK2Q9UL54 1235 aa19.83■□□□□ 0.76
SHKBP1-216ENST00000598201 LAMB1P07942 1786 aa19.83■□□□□ 0.76
SHKBP1-216ENST00000598201 FMNL1O95466 1100 aaPredicted RBP19.82■□□□□ 0.76
SHKBP1-216ENST00000598201 USP5P45974 858 aa19.82■□□□□ 0.76
SHKBP1-216ENST00000598201 KRT40Q6A162 431 aa19.82■□□□□ 0.76
SHKBP1-216ENST00000598201 ATL3Q6DD88 541 aa19.82■□□□□ 0.76
SHKBP1-216ENST00000598201 CMTR1Q8N1G2 835 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-216ENST00000598201 FANCBQ8NB91 859 aa19.82■□□□□ 0.76
SHKBP1-216ENST00000598201 TMX4Q9H1E5 349 aaPredicted RBP19.82■□□□□ 0.76
SHKBP1-216ENST00000598201 ECM29Q5VYK3 1845 aa19.82■□□□□ 0.76
SHKBP1-216ENST00000598201 NMT2O60551 498 aa19.82■□□□□ 0.76
SHKBP1-216ENST00000598201 BAG3O95817 575 aa19.82■□□□□ 0.76
SHKBP1-216ENST00000598201 LDHCP07864 332 aa19.82■□□□□ 0.76
SHKBP1-216ENST00000598201 GUCY1A2P33402 732 aa19.82■□□□□ 0.76
SHKBP1-216ENST00000598201 SSRP1Q08945 709 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-216ENST00000598201 FAM47AQ5JRC9 791 aa19.82■□□□□ 0.76
SHKBP1-216ENST00000598201 STK36Q9NRP7 1315 aa19.81■□□□□ 0.76
SHKBP1-216ENST00000598201 LETM1O95202 739 aaPredicted RBP19.81■□□□□ 0.76
SHKBP1-216ENST00000598201 RCAN1P53805 252 aa19.81■□□□□ 0.76
SHKBP1-216ENST00000598201 C12orf60Q5U649 245 aa19.81■□□□□ 0.76
SHKBP1-216ENST00000598201 NBPF11Q86T75 865 aa19.81■□□□□ 0.76
SHKBP1-216ENST00000598201 CCDC82Q8N4S0 544 aa19.81■□□□□ 0.76
SHKBP1-216ENST00000598201 MPNDQ8N594 471 aa19.81■□□□□ 0.76
SHKBP1-216ENST00000598201 RNF214Q8ND24 703 aa19.81■□□□□ 0.76
SHKBP1-216ENST00000598201 TGFBRAP1Q8WUH2 860 aa19.81■□□□□ 0.76
SHKBP1-216ENST00000598201 DACT1Q9NYF0 836 aa19.81■□□□□ 0.76
SHKBP1-216ENST00000598201 BTDP43251 543 aa19.8■□□□□ 0.76
SHKBP1-216ENST00000598201 GTF2IP78347 998 aa19.8■□□□□ 0.76
SHKBP1-216ENST00000598201 IFIT1BQ5T764 474 aaKnown RBP19.8■□□□□ 0.76
SHKBP1-216ENST00000598201 IQCA1Q86XH1 822 aa19.8■□□□□ 0.76
SHKBP1-216ENST00000598201 RGS22Q8NE09 1264 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms