RNA–Protein interactions for RNA: ENST00000597360.5

PDE4C-211, Transcript of phosphodiesterase 4C, humanhuman

TSL 2

Gene PDE4C, Length 3,511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-211ENST00000597360 MROH7-TTC4A0A0A0MT08 1334 aa17.47■□□□□ 0.39
PDE4C-211ENST00000597360 KIF28PB7ZC32 967 aa17.47■□□□□ 0.39
PDE4C-211ENST00000597360 SMYD4Q8IYR2 804 aaPredicted RBP17.47■□□□□ 0.39
PDE4C-211ENST00000597360 HNRNPLLQ8WVV9 542 aaKnown RBP17.47■□□□□ 0.39
PDE4C-211ENST00000597360 PRC1O43663 620 aa17.46■□□□□ 0.39
PDE4C-211ENST00000597360 DDX58O95786 925 aaKnown RBP17.46■□□□□ 0.39
PDE4C-211ENST00000597360 A1BGP04217 495 aa17.46■□□□□ 0.39
PDE4C-211ENST00000597360 CDC25AP30304 524 aa17.46■□□□□ 0.39
PDE4C-211ENST00000597360 CRB1P82279 1406 aa17.46■□□□□ 0.39
PDE4C-211ENST00000597360 FMR1Q06787 632 aaKnown RBP eCLIP17.46■□□□□ 0.39
PDE4C-211ENST00000597360 TTC39AQ5SRH9 613 aa17.46■□□□□ 0.39
PDE4C-211ENST00000597360 LGR6Q9HBX8 967 aa17.46■□□□□ 0.39
PDE4C-211ENST00000597360 INTS13Q9NVM9 706 aa17.46■□□□□ 0.39
PDE4C-211ENST00000597360 TRIM10Q9UDY6 481 aa17.46■□□□□ 0.39
PDE4C-211ENST00000597360 TFR2Q9UP52 801 aa17.46■□□□□ 0.39
PDE4C-211ENST00000597360 EDC4Q6P2E9 1401 aaKnown RBP17.46■□□□□ 0.39
PDE4C-211ENST00000597360 WHAMMP3Q1A5X7 153 aa17.46■□□□□ 0.39
PDE4C-211ENST00000597360 LMOD2Q6P5Q4 547 aa17.46■□□□□ 0.39
PDE4C-211ENST00000597360 BRAPQ7Z569 592 aa17.46■□□□□ 0.39
PDE4C-211ENST00000597360 VEZTQ9HBM0 779 aa17.46■□□□□ 0.39
PDE4C-211ENST00000597360 SERTAD1Q9UHV2 236 aa17.46■□□□□ 0.39
PDE4C-211ENST00000597360 PEX19P40855 299 aa17.46■□□□□ 0.38
PDE4C-211ENST00000597360 VPS37DQ86XT2 251 aa17.46■□□□□ 0.38
PDE4C-211ENST00000597360 GOLGA6L7A0A1B0GV03 622 aa17.45■□□□□ 0.38
PDE4C-211ENST00000597360 MMP14P50281 582 aa17.45■□□□□ 0.38
PDE4C-211ENST00000597360 SAFBQ15424 915 aaKnown RBP eCLIP17.45■□□□□ 0.38
PDE4C-211ENST00000597360 CCDC122Q5T0U0 273 aa17.45■□□□□ 0.38
PDE4C-211ENST00000597360 GNL3LQ9NVN8 582 aaKnown RBP17.45■□□□□ 0.38
PDE4C-211ENST00000597360 POLR3EQ9NVU0 708 aa17.45■□□□□ 0.38
PDE4C-211ENST00000597360 CDK12Q9NYV4 1490 aaPredicted RBP17.45■□□□□ 0.38
PDE4C-211ENST00000597360 MACROD2A1Z1Q3 448 aa17.45■□□□□ 0.38
PDE4C-211ENST00000597360 PROSER3Q2NL68 480 aa17.45■□□□□ 0.38
PDE4C-211ENST00000597360 CEP85LQ5SZL2 805 aa17.45■□□□□ 0.38
PDE4C-211ENST00000597360 MAPK8IP1Q9UQF2 711 aa17.45■□□□□ 0.38
PDE4C-211ENST00000597360 USP32Q8NFA0 1604 aa17.45■□□□□ 0.38
PDE4C-211ENST00000597360 MCM3P25205 808 aa17.44■□□□□ 0.38
PDE4C-211ENST00000597360 CASP1P29466 404 aa17.44■□□□□ 0.38
PDE4C-211ENST00000597360 CCDC181Q5TID7 509 aa17.44■□□□□ 0.38
PDE4C-211ENST00000597360 TMEM139Q8IV31 216 aa17.44■□□□□ 0.38
PDE4C-211ENST00000597360 AIDAQ96BJ3 306 aa17.44■□□□□ 0.38
PDE4C-211ENST00000597360 DBF4Q9UBU7 674 aaPredicted RBP17.44■□□□□ 0.38
PDE4C-211ENST00000597360 XRN1Q8IZH2 1706 aaKnown RBP17.44■□□□□ 0.38
PDE4C-211ENST00000597360 FDPSP14324 419 aaKnown RBP17.44■□□□□ 0.38
PDE4C-211ENST00000597360 KRT9P35527 623 aa17.44■□□□□ 0.38
PDE4C-211ENST00000597360 IFT88Q13099 833 aa17.44■□□□□ 0.38
PDE4C-211ENST00000597360 POSTNQ15063 836 aa17.44■□□□□ 0.38
PDE4C-211ENST00000597360 DBNLQ9UJU6 430 aaKnown RBP17.44■□□□□ 0.38
PDE4C-211ENST00000597360 PRR36Q9H6K5 1346 aa17.44■□□□□ 0.38
PDE4C-211ENST00000597360 NEDD9Q14511 834 aa17.44■□□□□ 0.38
PDE4C-211ENST00000597360 RASSF8Q8NHQ8 419 aa17.44■□□□□ 0.38
PDE4C-211ENST00000597360 MYD88Q99836 296 aa17.44■□□□□ 0.38
PDE4C-211ENST00000597360 TTF2Q9UNY4 1162 aaKnown RBP17.44■□□□□ 0.38
PDE4C-211ENST00000597360 HPDP32754 393 aaPredicted RBP17.43■□□□□ 0.38
PDE4C-211ENST00000597360 SHC4Q6S5L8 630 aa17.43■□□□□ 0.38
PDE4C-211ENST00000597360 METTL16Q86W50 562 aaKnown RBP17.43■□□□□ 0.38
PDE4C-211ENST00000597360 BCCIPQ9P287 314 aaKnown RBP eCLIP17.43■□□□□ 0.38
PDE4C-211ENST00000597360 MAP2P11137 1827 aaKnown RBP17.43■□□□□ 0.38
PDE4C-211ENST00000597360 CALRP27797 417 aaKnown RBP17.43■□□□□ 0.38
PDE4C-211ENST00000597360 SLC39A14Q15043 492 aa17.43■□□□□ 0.38
PDE4C-211ENST00000597360 MSANTD4Q8NCY6 345 aa17.43■□□□□ 0.38
PDE4C-211ENST00000597360 MYL10Q9BUA6 226 aa17.43■□□□□ 0.38
PDE4C-211ENST00000597360 SELENOOQ9BVL4 669 aa17.43■□□□□ 0.38
PDE4C-211ENST00000597360 MAN1B1Q9UKM7 699 aa17.43■□□□□ 0.38
PDE4C-211ENST00000597360 HPCAL4Q9UM19 191 aa17.43■□□□□ 0.38
PDE4C-211ENST00000597360 TIMM10P62072 90 aa17.43■□□□□ 0.38
PDE4C-211ENST00000597360 BIRC2Q13490 618 aa17.43■□□□□ 0.38
PDE4C-211ENST00000597360 HSF2BPO75031 334 aa17.42■□□□□ 0.38
PDE4C-211ENST00000597360 TUBBP07437 444 aa17.42■□□□□ 0.38
PDE4C-211ENST00000597360 SLC7A5Q01650 507 aa17.42■□□□□ 0.38
PDE4C-211ENST00000597360 IMMTQ16891 758 aaKnown RBP17.42■□□□□ 0.38
PDE4C-211ENST00000597360 SLC9C2Q5TAH2 1124 aa17.42■□□□□ 0.38
PDE4C-211ENST00000597360 SH2D3CQ8N5H7 860 aa17.42■□□□□ 0.38
PDE4C-211ENST00000597360 HSD3B7Q9H2F3 369 aa17.42■□□□□ 0.38
PDE4C-211ENST00000597360 TAB2Q9NYJ8 693 aa17.42■□□□□ 0.38
PDE4C-211ENST00000597360 RAB21Q9UL25 225 aa17.42■□□□□ 0.38
PDE4C-211ENST00000597360 SAR1BQ9Y6B6 198 aa17.42■□□□□ 0.38
PDE4C-211ENST00000597360 CHD2O14647 1828 aaKnown RBP17.42■□□□□ 0.38
PDE4C-211ENST00000597360 C2orf54Q08AI8 447 aa17.42■□□□□ 0.38
PDE4C-211ENST00000597360 PPFIA1Q13136 1202 aa17.42■□□□□ 0.38
PDE4C-211ENST00000597360 SWT1Q5T5J6 900 aaKnown RBP17.42■□□□□ 0.38
PDE4C-211ENST00000597360 KRT40Q6A162 431 aa17.42■□□□□ 0.38
PDE4C-211ENST00000597360 B4GALNT4Q76KP1 1039 aa17.42■□□□□ 0.38
PDE4C-211ENST00000597360 ATP5J2-PTCD1G3V325 749 aa17.42■□□□□ 0.38
PDE4C-211ENST00000597360 PTCD1O75127 700 aaKnown RBP17.42■□□□□ 0.38
PDE4C-211ENST00000597360 RPS6KA5O75582 802 aa17.42■□□□□ 0.38
PDE4C-211ENST00000597360 SYF2O95926 243 aaKnown RBP17.42■□□□□ 0.38
PDE4C-211ENST00000597360 KIF23Q02241 960 aaPredicted RBP17.42■□□□□ 0.38
PDE4C-211ENST00000597360 ZNF530Q6P9A1 599 aaPredicted RBP17.42■□□□□ 0.38
PDE4C-211ENST00000597360 MICALCLQ6ZW33 695 aa17.42■□□□□ 0.38
PDE4C-211ENST00000597360 UBE3BQ7Z3V4 1068 aa17.42■□□□□ 0.38
PDE4C-211ENST00000597360 COG1Q8WTW3 980 aa17.42■□□□□ 0.38
PDE4C-211ENST00000597360 MMS19Q96T76 1030 aa17.42■□□□□ 0.38
PDE4C-211ENST00000597360 SLC26A6Q9BXS9 759 aa17.42■□□□□ 0.38
PDE4C-211ENST00000597360 SARNPP82979 210 aaKnown RBP17.41■□□□□ 0.38
PDE4C-211ENST00000597360 ODF2Q5BJF6 829 aa17.41■□□□□ 0.38
PDE4C-211ENST00000597360 RRP12Q5JTH9 1297 aaKnown RBP17.41■□□□□ 0.38
PDE4C-211ENST00000597360 CNGA4Q8IV77 575 aa17.41■□□□□ 0.38
PDE4C-211ENST00000597360 FOXP4Q8IVH2 680 aaPredicted RBP17.41■□□□□ 0.38
PDE4C-211ENST00000597360 LMTK3Q96Q04 1460 aa17.41■□□□□ 0.38
PDE4C-211ENST00000597360 SKAP2O75563 359 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms