RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 SMC5Q8IY18 1101 aa25.52■■□□□ 1.68
PNKP-209ENST00000596726 PI4K2BQ8TCG2 481 aa25.52■■□□□ 1.68
PNKP-209ENST00000596726 BRI3BPQ8WY22 251 aa25.52■■□□□ 1.68
PNKP-209ENST00000596726 IGHDP01880 384 aa25.51■■□□□ 1.67
PNKP-209ENST00000596726 USP5P45974 858 aa25.51■■□□□ 1.67
PNKP-209ENST00000596726 UBE3CQ15386 1083 aa25.51■■□□□ 1.67
PNKP-209ENST00000596726 NOM1Q5C9Z4 860 aaKnown RBP25.51■■□□□ 1.67
PNKP-209ENST00000596726 PALD1Q9ULE6 856 aa25.51■■□□□ 1.67
PNKP-209ENST00000596726 KCNH4Q9UQ05 1017 aa25.51■■□□□ 1.67
PNKP-209ENST00000596726 ATAD5Q96QE3 1844 aa25.51■■□□□ 1.67
PNKP-209ENST00000596726 CCL15-CCL14A0A0B4J2E2 113 aa25.5■■□□□ 1.67
PNKP-209ENST00000596726 CCL15Q16663 113 aa25.5■■□□□ 1.67
PNKP-209ENST00000596726 DDX60LQ5H9U9 1706 aaKnown RBP25.5■■□□□ 1.67
PNKP-209ENST00000596726 OTUD7BQ6GQQ9 843 aa25.5■■□□□ 1.67
PNKP-209ENST00000596726 FOXP4Q8IVH2 680 aaPredicted RBP25.5■■□□□ 1.67
PNKP-209ENST00000596726 TNS4Q8IZW8 715 aa25.5■■□□□ 1.67
PNKP-209ENST00000596726 KBTBD3Q8NAB2 608 aa25.5■■□□□ 1.67
PNKP-209ENST00000596726 R3HDMLQ9H3Y0 253 aa25.5■■□□□ 1.67
PNKP-209ENST00000596726 SAP30BPQ9UHR5 308 aaKnown RBP25.5■■□□□ 1.67
PNKP-209ENST00000596726 NAV1Q8NEY1 1877 aa25.49■■□□□ 1.67
PNKP-209ENST00000596726 ERC2O15083 957 aa25.49■■□□□ 1.67
PNKP-209ENST00000596726 CHGBP05060 677 aa25.49■■□□□ 1.67
PNKP-209ENST00000596726 PTPRAP18433 802 aa25.49■■□□□ 1.67
PNKP-209ENST00000596726 MX1P20591 662 aa25.49■■□□□ 1.67
PNKP-209ENST00000596726 SNAPC2Q13487 334 aa25.49■■□□□ 1.67
PNKP-209ENST00000596726 ZSCAN25Q6NSZ9 544 aa25.49■■□□□ 1.67
PNKP-209ENST00000596726 LCORLQ8N3X6 602 aa25.49■■□□□ 1.67
PNKP-209ENST00000596726 ZBTB47Q9UFB7 747 aaPredicted RBP25.49■■□□□ 1.67
PNKP-209ENST00000596726 GLRX3O76003 335 aaKnown RBP25.48■■□□□ 1.67
PNKP-209ENST00000596726 CETPP11597 493 aa25.48■■□□□ 1.67
PNKP-209ENST00000596726 RRP1BQ14684 758 aaKnown RBP25.48■■□□□ 1.67
PNKP-209ENST00000596726 CRNKL1Q9BZJ0 848 aaKnown RBP25.48■■□□□ 1.67
PNKP-209ENST00000596726 DNAJC18Q9H819 358 aa25.48■■□□□ 1.67
PNKP-209ENST00000596726 PICK1Q9NRD5 415 aa25.48■■□□□ 1.67
PNKP-209ENST00000596726 PTPRFP10586 1907 aa25.47■■□□□ 1.67
PNKP-209ENST00000596726 STAP2Q9UGK3 403 aa25.47■■□□□ 1.67
PNKP-209ENST00000596726 GPR25O00155 361 aa25.46■■□□□ 1.67
PNKP-209ENST00000596726 CXCL11O14625 94 aa25.46■■□□□ 1.67
PNKP-209ENST00000596726 HLA-DOAP06340 250 aa25.46■■□□□ 1.67
PNKP-209ENST00000596726 CAP2P40123 477 aa25.46■■□□□ 1.67
PNKP-209ENST00000596726 FAM43AQ8N2R8 423 aa25.46■■□□□ 1.67
PNKP-209ENST00000596726 ARMT1Q9H993 441 aa25.46■■□□□ 1.67
PNKP-209ENST00000596726 AFG3L2Q9Y4W6 797 aa25.46■■□□□ 1.67
PNKP-209ENST00000596726 ZHX2Q9Y6X8 837 aa25.46■■□□□ 1.67
PNKP-209ENST00000596726 MBD4O95243 580 aa25.45■■□□□ 1.66
PNKP-209ENST00000596726 IRX6P78412 446 aaPredicted RBP25.45■■□□□ 1.66
PNKP-209ENST00000596726 MOGSQ13724 837 aa25.45■■□□□ 1.66
PNKP-209ENST00000596726 EHD4Q9H223 541 aa25.45■■□□□ 1.66
PNKP-209ENST00000596726 ZCCHC17Q9NP64 241 aaKnown RBP25.45■■□□□ 1.66
PNKP-209ENST00000596726 BTBD19C9JJ37 291 aa25.44■■□□□ 1.66
PNKP-209ENST00000596726 CRACR2BQ8N4Y2 399 aaPredicted RBP25.44■■□□□ 1.66
PNKP-209ENST00000596726 SDR42E1Q8WUS8 393 aa25.44■■□□□ 1.66
PNKP-209ENST00000596726 ZNF296Q8WUU4 475 aaPredicted RBP25.44■■□□□ 1.66
PNKP-209ENST00000596726 PUS7LQ9H0K6 701 aaKnown RBP25.44■■□□□ 1.66
PNKP-209ENST00000596726 DCP1AQ9NPI6 582 aaPredicted RBP25.44■■□□□ 1.66
PNKP-209ENST00000596726 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.44■■□□□ 1.66
PNKP-209ENST00000596726 BAZ2AQ9UIF9 1905 aaKnown RBP25.43■■□□□ 1.66
PNKP-209ENST00000596726 PDE1AP54750 535 aa25.43■■□□□ 1.66
PNKP-209ENST00000596726 CRHR2Q13324 411 aa25.43■■□□□ 1.66
PNKP-209ENST00000596726 SLC4A8Q2Y0W8 1093 aa25.43■■□□□ 1.66
PNKP-209ENST00000596726 TTC6Q86TZ1 520 aa25.43■■□□□ 1.66
PNKP-209ENST00000596726 LNPKQ9C0E8 428 aa25.43■■□□□ 1.66
PNKP-209ENST00000596726 PRKAB2O43741 272 aa25.42■■□□□ 1.66
PNKP-209ENST00000596726 ZFYP08048 801 aaPredicted RBP25.42■■□□□ 1.66
PNKP-209ENST00000596726 NUCB1Q02818 461 aa25.42■■□□□ 1.66
PNKP-209ENST00000596726 B4GALNT3Q6L9W6 998 aa25.42■■□□□ 1.66
PNKP-209ENST00000596726 ATP8A2Q9NTI2 1148 aa25.42■■□□□ 1.66
PNKP-209ENST00000596726 SERPINB13Q9UIV8 391 aa25.42■■□□□ 1.66
PNKP-209ENST00000596726 A0A0G2JLL6 359 aaPredicted RBP25.41■■□□□ 1.66
PNKP-209ENST00000596726 RNF113AO15541 343 aaKnown RBP25.41■■□□□ 1.66
PNKP-209ENST00000596726 PLCD1P51178 756 aa25.41■■□□□ 1.66
PNKP-209ENST00000596726 JAG1P78504 1218 aa25.41■■□□□ 1.66
PNKP-209ENST00000596726 TATDN1Q6P1N9 297 aa25.41■■□□□ 1.66
PNKP-209ENST00000596726 PRRT2Q7Z6L0 340 aaPredicted RBP25.41■■□□□ 1.66
PNKP-209ENST00000596726 CCDC84Q86UT8 332 aaPredicted RBP25.41■■□□□ 1.66
PNKP-209ENST00000596726 APPBP2Q92624 585 aa25.41■■□□□ 1.66
PNKP-209ENST00000596726 TRIM34Q9BYJ4 488 aa25.41■■□□□ 1.66
PNKP-209ENST00000596726 FKTNO75072 461 aa25.4■■□□□ 1.66
PNKP-209ENST00000596726 POLR3DP05423 398 aaPredicted RBP25.4■■□□□ 1.66
PNKP-209ENST00000596726 IFFO2Q5TF58 517 aa25.4■■□□□ 1.66
PNKP-209ENST00000596726 ANKRD23Q86SG2 305 aa25.4■■□□□ 1.66
PNKP-209ENST00000596726 CHD1LQ86WJ1 897 aa25.4■■□□□ 1.66
PNKP-209ENST00000596726 OSBP2Q969R2 916 aa25.4■■□□□ 1.66
PNKP-209ENST00000596726 TBC1D2Q9BYX2 928 aa25.4■■□□□ 1.66
PNKP-209ENST00000596726 GINM1Q9NU53 330 aa25.4■■□□□ 1.66
PNKP-209ENST00000596726 MCM9Q9NXL9 1143 aa25.4■■□□□ 1.66
PNKP-209ENST00000596726 GABPAQ06546 454 aa25.39■■□□□ 1.66
PNKP-209ENST00000596726 TAF1CQ15572 869 aaPredicted RBP25.39■■□□□ 1.66
PNKP-209ENST00000596726 GPAT2Q6NUI2 795 aa25.39■■□□□ 1.66
PNKP-209ENST00000596726 STRBPQ96SI9 672 aaKnown RBP25.39■■□□□ 1.66
PNKP-209ENST00000596726 ZFYVE28Q9HCC9 887 aa25.39■■□□□ 1.66
PNKP-209ENST00000596726 USP17L5A8MUK1 530 aa25.38■■□□□ 1.65
PNKP-209ENST00000596726 ASNSP08243 561 aa25.38■■□□□ 1.65
PNKP-209ENST00000596726 LRRFIP1Q32MZ4 808 aaKnown RBP25.38■■□□□ 1.65
PNKP-209ENST00000596726 SLC4A4Q9Y6R1 1079 aa25.38■■□□□ 1.65
PNKP-209ENST00000596726 TRIM75PA6NK02 468 aa25.37■■□□□ 1.65
PNKP-209ENST00000596726 EVX2Q03828 476 aa25.37■■□□□ 1.65
PNKP-209ENST00000596726 SHROOM1Q2M3G4 852 aaPredicted RBP25.37■■□□□ 1.65
PNKP-209ENST00000596726 FASTKD5Q7L8L6 764 aaKnown RBP25.37■■□□□ 1.65
PNKP-209ENST00000596726 ZNF280CQ8ND82 737 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms