RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 CPLX2Q6PUV4 134 aaKnown RBP17.49■□□□□ 0.39
GTF2F1-202ENST00000593678 OGFOD1Q8N543 542 aa17.49■□□□□ 0.39
GTF2F1-202ENST00000593678 IGDCC4Q8TDY8 1250 aa17.49■□□□□ 0.39
GTF2F1-202ENST00000593678 STX6O43752 255 aa17.48■□□□□ 0.39
GTF2F1-202ENST00000593678 RAD17O75943 681 aa17.48■□□□□ 0.39
GTF2F1-202ENST00000593678 METAP2P50579 478 aaKnown RBP eCLIP17.48■□□□□ 0.393e-8■■■■■ 26.8
GTF2F1-202ENST00000593678 PKP1Q13835 747 aa17.48■□□□□ 0.39
GTF2F1-202ENST00000593678 RSBN1LQ6PCB5 846 aaPredicted RBP17.48■□□□□ 0.39
GTF2F1-202ENST00000593678 TTC6Q86TZ1 520 aa17.48■□□□□ 0.39
GTF2F1-202ENST00000593678 SGMS1Q86VZ5 419 aa17.48■□□□□ 0.39
GTF2F1-202ENST00000593678 ZKSCAN3Q9BRR0 538 aa17.48■□□□□ 0.39
GTF2F1-202ENST00000593678 ANP32EQ9BTT0 268 aa17.48■□□□□ 0.39
GTF2F1-202ENST00000593678 LY9Q9HBG7 655 aa17.48■□□□□ 0.39
GTF2F1-202ENST00000593678 BRPF3Q9ULD4 1205 aa17.48■□□□□ 0.39
GTF2F1-202ENST00000593678 ROBO3Q96MS0 1386 aa17.48■□□□□ 0.39
GTF2F1-202ENST00000593678 CDK5RAP2Q96SN8 1893 aa17.48■□□□□ 0.39
GTF2F1-202ENST00000593678 TNKSO95271 1327 aa17.48■□□□□ 0.39
GTF2F1-202ENST00000593678 ZBTB43O43298 467 aa17.47■□□□□ 0.39
GTF2F1-202ENST00000593678 CDKL5O76039 1030 aa17.47■□□□□ 0.39
GTF2F1-202ENST00000593678 LARP1BQ659C4 914 aaKnown RBP17.47■□□□□ 0.39
GTF2F1-202ENST00000593678 ZSCAN10Q96SZ4 725 aaPredicted RBP17.47■□□□□ 0.39
GTF2F1-202ENST00000593678 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.47■□□□□ 0.39
GTF2F1-202ENST00000593678 TACC3Q9Y6A5 838 aa17.47■□□□□ 0.39
GTF2F1-202ENST00000593678 PSME4Q14997 1843 aa17.47■□□□□ 0.39
GTF2F1-202ENST00000593678 DDX11L8A8MPP1 907 aa17.47■□□□□ 0.39
GTF2F1-202ENST00000593678 PSMD14O00487 310 aa17.47■□□□□ 0.39
GTF2F1-202ENST00000593678 BRD1O95696 1058 aa17.47■□□□□ 0.39
GTF2F1-202ENST00000593678 SYT1P21579 422 aa17.47■□□□□ 0.39
GTF2F1-202ENST00000593678 FER1L6Q2WGJ9 1857 aa17.47■□□□□ 0.39
GTF2F1-202ENST00000593678 APOBEC3HQ6NTF7 200 aaKnown RBP17.47■□□□□ 0.39
GTF2F1-202ENST00000593678 CDC42EP5Q6NZY7 148 aa17.47■□□□□ 0.39
GTF2F1-202ENST00000593678 APOA5Q6Q788 366 aa17.47■□□□□ 0.39
GTF2F1-202ENST00000593678 MICU3Q86XE3 530 aa17.47■□□□□ 0.39
GTF2F1-202ENST00000593678 ZNF444Q8N0Y2 327 aaPredicted RBP17.47■□□□□ 0.39
GTF2F1-202ENST00000593678 HLA-DOAP06340 250 aa17.46■□□□□ 0.39
GTF2F1-202ENST00000593678 VIL1P09327 827 aaKnown RBP17.46■□□□□ 0.39
GTF2F1-202ENST00000593678 CCDC178Q5BJE1 867 aa17.46■□□□□ 0.39
GTF2F1-202ENST00000593678 IFIT1BQ5T764 474 aaKnown RBP17.46■□□□□ 0.39
GTF2F1-202ENST00000593678 FOXD4L5Q5VV16 416 aaPredicted RBP17.46■□□□□ 0.39
GTF2F1-202ENST00000593678 FOXD4L4Q8WXT5 416 aaPredicted RBP17.46■□□□□ 0.39
GTF2F1-202ENST00000593678 NCOA5Q9HCD5 579 aaKnown RBP17.46■□□□□ 0.39
GTF2F1-202ENST00000593678 ATP6V1DQ9Y5K8 247 aa17.46■□□□□ 0.39
GTF2F1-202ENST00000593678 MYH1P12882 1939 aa17.46■□□□□ 0.39
GTF2F1-202ENST00000593678 FOCADQ5VW36 1801 aa17.45■□□□□ 0.38
GTF2F1-202ENST00000593678 PTPDC1A2A3K4 754 aa17.45■□□□□ 0.38
GTF2F1-202ENST00000593678 VPS37CA5D8V6 355 aaPredicted RBP17.45■□□□□ 0.38
GTF2F1-202ENST00000593678 GOLGA8AA7E2F4 631 aa17.45■□□□□ 0.38
GTF2F1-202ENST00000593678 WDHD1O75717 1129 aaPredicted RBP17.45■□□□□ 0.38
GTF2F1-202ENST00000593678 TSPY3P0CV98 308 aa17.45■□□□□ 0.38
GTF2F1-202ENST00000593678 TSPY8P0CW00 308 aa17.45■□□□□ 0.38
GTF2F1-202ENST00000593678 PTMSP20962 102 aa17.45■□□□□ 0.38
GTF2F1-202ENST00000593678 TNIP1Q15025 636 aa17.45■□□□□ 0.38
GTF2F1-202ENST00000593678 DDX11Q96FC9 970 aa17.45■□□□□ 0.38
GTF2F1-202ENST00000593678 TMOD2Q9NZR1 351 aa17.45■□□□□ 0.38
GTF2F1-202ENST00000593678 LTBP3Q9NS15 1303 aa17.45■□□□□ 0.38
GTF2F1-202ENST00000593678 SMIM22K7EJ46 135 aa17.44■□□□□ 0.38
GTF2F1-202ENST00000593678 JAK2O60674 1132 aa17.44■□□□□ 0.38
GTF2F1-202ENST00000593678 MCM4P33991 863 aa17.44■□□□□ 0.38
GTF2F1-202ENST00000593678 PLCD1P51178 756 aa17.44■□□□□ 0.38
GTF2F1-202ENST00000593678 CFAP100Q494V2 611 aa17.44■□□□□ 0.38
GTF2F1-202ENST00000593678 CIAPIN1Q6FI81 312 aa17.44■□□□□ 0.38
GTF2F1-202ENST00000593678 NSUN7Q8NE18 718 aaKnown RBP17.44■□□□□ 0.38
GTF2F1-202ENST00000593678 AGBL3Q8NEM8 1001 aa17.44■□□□□ 0.38
GTF2F1-202ENST00000593678 NLGN2Q8NFZ4 835 aa17.44■□□□□ 0.38
GTF2F1-202ENST00000593678 NKX2-3Q8TAU0 364 aa17.44■□□□□ 0.38
GTF2F1-202ENST00000593678 DYNLL2Q96FJ2 89 aa17.44■□□□□ 0.38
GTF2F1-202ENST00000593678 GOLGB1Q14789 3259 aaKnown RBP17.44■□□□□ 0.38
GTF2F1-202ENST00000593678 ZNF646O15015 1829 aaPredicted RBP17.44■□□□□ 0.38
GTF2F1-202ENST00000593678 CCDC196A0A1B0GTZ2 297 aa17.44■□□□□ 0.38
GTF2F1-202ENST00000593678 H3BQV1 296 aa17.44■□□□□ 0.38
GTF2F1-202ENST00000593678 NFKBIEO00221 500 aa17.44■□□□□ 0.38
GTF2F1-202ENST00000593678 ZSCAN22P10073 491 aaPredicted RBP17.44■□□□□ 0.38
GTF2F1-202ENST00000593678 RCAN1P53805 252 aa17.44■□□□□ 0.38
GTF2F1-202ENST00000593678 FAM47AQ5JRC9 791 aa17.44■□□□□ 0.38
GTF2F1-202ENST00000593678 IFFO2Q5TF58 517 aa17.44■□□□□ 0.38
GTF2F1-202ENST00000593678 CATIPQ7Z7H3 387 aa17.44■□□□□ 0.38
GTF2F1-202ENST00000593678 RAB11FIP4Q86YS3 637 aa17.44■□□□□ 0.38
GTF2F1-202ENST00000593678 SMARCC2Q8TAQ2 1214 aa17.44■□□□□ 0.38
GTF2F1-202ENST00000593678 OSBPL5Q9H0X9 879 aaPredicted RBP17.44■□□□□ 0.38
GTF2F1-202ENST00000593678 ADAMTSL1Q8N6G6 1762 aa17.43■□□□□ 0.38
GTF2F1-202ENST00000593678 TFAP4Q01664 338 aa17.43■□□□□ 0.38
GTF2F1-202ENST00000593678 DLGAP5Q15398 846 aa17.43■□□□□ 0.38
GTF2F1-202ENST00000593678 C16orf86Q6ZW13 317 aa17.43■□□□□ 0.38
GTF2F1-202ENST00000593678 ENAHQ8N8S7 591 aaPredicted RBP17.43■□□□□ 0.38
GTF2F1-202ENST00000593678 DHX36Q9H2U1 1008 aaKnown RBP17.43■□□□□ 0.38
GTF2F1-202ENST00000593678 HPS5Q9UPZ3 1129 aa17.43■□□□□ 0.38
GTF2F1-202ENST00000593678 ZDHHC9Q9Y397 364 aa17.43■□□□□ 0.38
GTF2F1-202ENST00000593678 DDX60LQ5H9U9 1706 aaKnown RBP17.43■□□□□ 0.38
GTF2F1-202ENST00000593678 ECM29Q5VYK3 1845 aa17.42■□□□□ 0.38
GTF2F1-202ENST00000593678 ARFGEF1Q9Y6D6 1849 aa17.42■□□□□ 0.38
GTF2F1-202ENST00000593678 CALM1P0DP23 149 aa17.42■□□□□ 0.38
GTF2F1-202ENST00000593678 CALM2P0DP24 149 aa17.42■□□□□ 0.38
GTF2F1-202ENST00000593678 CALM3P0DP25 149 aa17.42■□□□□ 0.38
GTF2F1-202ENST00000593678 EVX2Q03828 476 aa17.42■□□□□ 0.38
GTF2F1-202ENST00000593678 PPP2R5BQ15173 497 aa17.42■□□□□ 0.38
GTF2F1-202ENST00000593678 CLEC17AQ6ZS10 378 aa17.42■□□□□ 0.38
GTF2F1-202ENST00000593678 ZNF654Q8IZM8 581 aa17.42■□□□□ 0.38
GTF2F1-202ENST00000593678 NUP133Q8WUM0 1156 aa17.42■□□□□ 0.38
GTF2F1-202ENST00000593678 TRIM34Q9BYJ4 488 aa17.42■□□□□ 0.38
GTF2F1-202ENST00000593678 SENP2Q9HC62 589 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms