RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 FOCADQ5VW36 1801 aa21.55■■□□□ 1.04
RETREG3-212ENST00000593251 INHAP05111 366 aa21.55■■□□□ 1.04
RETREG3-212ENST00000593251 TRIM27P14373 513 aa21.55■■□□□ 1.04
RETREG3-212ENST00000593251 ARID4AP29374 1257 aaPredicted RBP21.55■■□□□ 1.04
RETREG3-212ENST00000593251 MCAMP43121 646 aa21.55■■□□□ 1.04
RETREG3-212ENST00000593251 GSTO1P78417 241 aa21.55■■□□□ 1.04
RETREG3-212ENST00000593251 SPP2Q13103 211 aa21.55■■□□□ 1.04
RETREG3-212ENST00000593251 RRP1BQ14684 758 aaKnown RBP21.55■■□□□ 1.04
RETREG3-212ENST00000593251 FRAT1Q92837 279 aaPredicted RBP21.55■■□□□ 1.04
RETREG3-212ENST00000593251 CLUAP1Q96AJ1 413 aa21.55■■□□□ 1.04
RETREG3-212ENST00000593251 OSBPL5Q9H0X9 879 aaPredicted RBP21.55■■□□□ 1.04
RETREG3-212ENST00000593251 ALPK3Q96L96 1907 aa21.55■■□□□ 1.04
RETREG3-212ENST00000593251 NPM3O75607 178 aaKnown RBP21.54■■□□□ 1.04
RETREG3-212ENST00000593251 BCAR3O75815 825 aa21.54■■□□□ 1.04
RETREG3-212ENST00000593251 FARP2O94887 1054 aaPredicted RBP21.54■■□□□ 1.04
RETREG3-212ENST00000593251 GNAI2P04899 355 aa21.54■■□□□ 1.04
RETREG3-212ENST00000593251 G3BP1Q13283 466 aaKnown RBP eCLIP21.54■■□□□ 1.04
RETREG3-212ENST00000593251 TEX11Q8IYF3 940 aa21.54■■□□□ 1.04
RETREG3-212ENST00000593251 HTATIP2Q9BUP3 242 aa21.54■■□□□ 1.04
RETREG3-212ENST00000593251 COL2A1P02458 1487 aaPredicted RBP21.53■■□□□ 1.04
RETREG3-212ENST00000593251 SGPL1O95470 568 aa21.53■■□□□ 1.04
RETREG3-212ENST00000593251 HMGCS2P54868 508 aa21.53■■□□□ 1.04
RETREG3-212ENST00000593251 PXYLP1Q8TE99 480 aa21.53■■□□□ 1.04
RETREG3-212ENST00000593251 SH3RF3Q8TEJ3 882 aaPredicted RBP21.53■■□□□ 1.04
RETREG3-212ENST00000593251 SNRKQ9NRH2 765 aa21.53■■□□□ 1.04
RETREG3-212ENST00000593251 LRP2BPQ9P2M1 347 aa21.53■■□□□ 1.04
RETREG3-212ENST00000593251 RBM27Q9P2N5 1060 aaKnown RBP21.53■■□□□ 1.04
RETREG3-212ENST00000593251 SZT2Q5T011 3432 aa21.52■■□□□ 1.04
RETREG3-212ENST00000593251 IRF5Q13568 498 aa21.52■■□□□ 1.04
RETREG3-212ENST00000593251 ATF7IPQ6VMQ6 1270 aa21.52■■□□□ 1.04
RETREG3-212ENST00000593251 PROCA1Q8NCQ7 364 aaPredicted RBP21.52■■□□□ 1.04
RETREG3-212ENST00000593251 ZNF280CQ8ND82 737 aa21.52■■□□□ 1.04
RETREG3-212ENST00000593251 COA7Q96BR5 231 aa21.52■■□□□ 1.04
RETREG3-212ENST00000593251 DEFB118Q96PH6 123 aa21.52■■□□□ 1.04
RETREG3-212ENST00000593251 PNMA3Q9UL41 463 aa21.52■■□□□ 1.04
RETREG3-212ENST00000593251 PLXNB2O15031 1838 aa21.52■■□□□ 1.04
RETREG3-212ENST00000593251 IPO8O15397 1037 aaKnown RBP21.51■■□□□ 1.03
RETREG3-212ENST00000593251 MAP4K4O95819 1239 aaPredicted RBP21.51■■□□□ 1.03
RETREG3-212ENST00000593251 CAP2P40123 477 aa21.51■■□□□ 1.03
RETREG3-212ENST00000593251 FAM110CQ1W6H9 321 aa21.51■■□□□ 1.03
RETREG3-212ENST00000593251 RANBP2P49792 3224 aaKnown RBP21.5■■□□□ 1.03
RETREG3-212ENST00000593251 TFRCP02786 760 aaKnown RBP21.5■■□□□ 1.03
RETREG3-212ENST00000593251 UQCRFS1P1P0C7P4 283 aa21.5■■□□□ 1.03
RETREG3-212ENST00000593251 AATFQ9NY61 560 aaKnown RBP eCLIP21.5■■□□□ 1.03
RETREG3-212ENST00000593251 USP17L5A8MUK1 530 aa21.49■■□□□ 1.03
RETREG3-212ENST00000593251 NOL10Q9BSC4 688 aaKnown RBP21.49■■□□□ 1.03
RETREG3-212ENST00000593251 ZBTB7BO15156 539 aaPredicted RBP21.48■■□□□ 1.03
RETREG3-212ENST00000593251 TTC39AQ5SRH9 613 aa21.48■■□□□ 1.03
RETREG3-212ENST00000593251 NAA16Q6N069 864 aaPredicted RBP21.48■■□□□ 1.03
RETREG3-212ENST00000593251 TMEM57Q8N5G2 664 aa21.48■■□□□ 1.03
RETREG3-212ENST00000593251 DBNDD2Q9BQY9 259 aa21.48■■□□□ 1.03
RETREG3-212ENST00000593251 ASCC2Q9H1I8 757 aaPredicted RBP21.48■■□□□ 1.03
RETREG3-212ENST00000593251 PAK6Q9NQU5 681 aaPredicted RBP21.48■■□□□ 1.03
RETREG3-212ENST00000593251 NR2E3Q9Y5X4 410 aa21.48■■□□□ 1.03
RETREG3-212ENST00000593251 MYH1P12882 1939 aa21.48■■□□□ 1.03
RETREG3-212ENST00000593251 CCER2I3L3R5 266 aa21.47■■□□□ 1.03
RETREG3-212ENST00000593251 JAG1P78504 1218 aa21.47■■□□□ 1.03
RETREG3-212ENST00000593251 ADGRA1Q86SQ6 560 aa21.47■■□□□ 1.03
RETREG3-212ENST00000593251 MAPKAPK5Q8IW41 473 aa21.47■■□□□ 1.03
RETREG3-212ENST00000593251 TGFBRAP1Q8WUH2 860 aa21.47■■□□□ 1.03
RETREG3-212ENST00000593251 AS3MTQ9HBK9 375 aa21.47■■□□□ 1.03
RETREG3-212ENST00000593251 HERC5Q9UII4 1024 aaKnown RBP21.47■■□□□ 1.03
RETREG3-212ENST00000593251 PEX10O60683 326 aa21.46■■□□□ 1.03
RETREG3-212ENST00000593251 GCLCP48506 637 aaPredicted RBP21.46■■□□□ 1.03
RETREG3-212ENST00000593251 PABPC4Q13310 644 aaKnown RBP eCLIP21.46■■□□□ 1.03
RETREG3-212ENST00000593251 OS9Q13438 667 aaPredicted RBP21.46■■□□□ 1.03
RETREG3-212ENST00000593251 MTMR2Q13614 643 aa21.46■■□□□ 1.03
RETREG3-212ENST00000593251 SHROOM1Q2M3G4 852 aaPredicted RBP21.46■■□□□ 1.03
RETREG3-212ENST00000593251 TNNI3KQ59H18 835 aa21.46■■□□□ 1.03
RETREG3-212ENST00000593251 SH3D19Q5HYK7 790 aa21.46■■□□□ 1.03
RETREG3-212ENST00000593251 TBC1D2Q9BYX2 928 aa21.46■■□□□ 1.03
RETREG3-212ENST00000593251 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.46■■□□□ 1.03
RETREG3-212ENST00000593251 PI4KBQ9UBF8 816 aa21.46■■□□□ 1.03
RETREG3-212ENST00000593251 FPGT-TNNI3KV9GXZ4 949 aa21.46■■□□□ 1.03
RETREG3-212ENST00000593251 EVI5O60447 810 aa21.45■■□□□ 1.02
RETREG3-212ENST00000593251 BAG3O95817 575 aa21.45■■□□□ 1.02
RETREG3-212ENST00000593251 CYP2E1P05181 493 aaPredicted RBP21.45■■□□□ 1.02
RETREG3-212ENST00000593251 TRIM32Q13049 653 aa21.45■■□□□ 1.02
RETREG3-212ENST00000593251 POLA2Q14181 598 aa21.45■■□□□ 1.02
RETREG3-212ENST00000593251 DIS3LQ8TF46 1054 aaKnown RBP21.45■■□□□ 1.02
RETREG3-212ENST00000593251 PAWRQ96IZ0 340 aaKnown RBP21.45■■□□□ 1.02
RETREG3-212ENST00000593251 CRISPLD2Q9H0B8 497 aa21.45■■□□□ 1.02
RETREG3-212ENST00000593251 PRO3102Q9H379 93 aa21.45■■□□□ 1.02
RETREG3-212ENST00000593251 C1orf115Q9H7X2 142 aa21.45■■□□□ 1.02
RETREG3-212ENST00000593251 DNAJC18Q9H819 358 aa21.45■■□□□ 1.02
RETREG3-212ENST00000593251 DDX60LQ5H9U9 1706 aaKnown RBP21.44■■□□□ 1.02
RETREG3-212ENST00000593251 GDF11O95390 407 aa21.44■■□□□ 1.02
RETREG3-212ENST00000593251 CCDC158Q5M9N0 1113 aa21.44■■□□□ 1.02
RETREG3-212ENST00000593251 DHX36Q9H2U1 1008 aaKnown RBP21.44■■□□□ 1.02
RETREG3-212ENST00000593251 GPR108Q9NPR9 543 aa21.44■■□□□ 1.02
RETREG3-212ENST00000593251 GJD2Q9UKL4 321 aa21.44■■□□□ 1.02
RETREG3-212ENST00000593251 PALD1Q9ULE6 856 aa21.44■■□□□ 1.02
RETREG3-212ENST00000593251 FLT1P17948 1338 aa21.44■■□□□ 1.02
RETREG3-212ENST00000593251 HMGCRP04035 888 aa21.43■■□□□ 1.02
RETREG3-212ENST00000593251 PLCG2P16885 1265 aa21.43■■□□□ 1.02
RETREG3-212ENST00000593251 ZAP70P43403 619 aa21.43■■□□□ 1.02
RETREG3-212ENST00000593251 IRX3P78415 501 aaPredicted RBP21.43■■□□□ 1.02
RETREG3-212ENST00000593251 CRACR2BQ8N4Y2 399 aaPredicted RBP21.43■■□□□ 1.02
RETREG3-212ENST00000593251 WDR18Q9BV38 432 aa21.43■■□□□ 1.02
RETREG3-212ENST00000593251 PIH1D3Q9NQM4 214 aaKnown RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms