RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 DDR1Q08345 913 aa22.85■■□□□ 1.25
CLIP3-206ENST00000593074 SLC26A6Q9BXS9 759 aa22.85■■□□□ 1.25
CLIP3-206ENST00000593074 DLEC1Q9Y238 1755 aa22.84■■□□□ 1.25
CLIP3-206ENST00000593074 POLRMTO00411 1230 aaKnown RBP22.84■■□□□ 1.25
CLIP3-206ENST00000593074 SF3A1Q15459 793 aaKnown RBP22.84■■□□□ 1.25
CLIP3-206ENST00000593074 LUZP1Q86V48 1076 aa22.84■■□□□ 1.25
CLIP3-206ENST00000593074 ZNF654Q8IZM8 581 aa22.84■■□□□ 1.25
CLIP3-206ENST00000593074 STK11IPQ8N1F8 1099 aa22.84■■□□□ 1.25
CLIP3-206ENST00000593074 TNKSO95271 1327 aa22.83■■□□□ 1.25
CLIP3-206ENST00000593074 CCDC196A0A1B0GTZ2 297 aa22.83■■□□□ 1.25
CLIP3-206ENST00000593074 PLSCR1O15162 318 aa22.83■■□□□ 1.25
CLIP3-206ENST00000593074 PRDX5P30044 214 aa22.83■■□□□ 1.25
CLIP3-206ENST00000593074 TRIM29Q14134 588 aa22.83■■□□□ 1.25
CLIP3-206ENST00000593074 SMIM22K7EJ46 135 aa22.83■■□□□ 1.24
CLIP3-206ENST00000593074 BBOX1O75936 387 aa22.83■■□□□ 1.24
CLIP3-206ENST00000593074 CTR9Q6PD62 1173 aa22.83■■□□□ 1.24
CLIP3-206ENST00000593074 C15orf52Q6ZUT6 534 aaKnown RBP22.83■■□□□ 1.24
CLIP3-206ENST00000593074 NBPF11Q86T75 865 aa22.83■■□□□ 1.24
CLIP3-206ENST00000593074 TDRD7Q8NHU6 1098 aaKnown RBP22.83■■□□□ 1.24
CLIP3-206ENST00000593074 GPSM2P81274 684 aa22.82■■□□□ 1.24
CLIP3-206ENST00000593074 SLC39A14Q15043 492 aa22.82■■□□□ 1.24
CLIP3-206ENST00000593074 ZNF804AQ7Z570 1209 aa22.82■■□□□ 1.24
CLIP3-206ENST00000593074 WDR66Q8TBY9 1149 aa22.82■■□□□ 1.24
CLIP3-206ENST00000593074 UBE2Q2LH0YL09 131 aa22.81■■□□□ 1.24
CLIP3-206ENST00000593074 IGSF3O75054 1194 aa22.81■■□□□ 1.24
CLIP3-206ENST00000593074 APBA3O96018 575 aa22.81■■□□□ 1.24
CLIP3-206ENST00000593074 HOXA10P31260 410 aaPredicted RBP22.81■■□□□ 1.24
CLIP3-206ENST00000593074 AXDND1Q5T1B0 1012 aaPredicted RBP22.81■■□□□ 1.24
CLIP3-206ENST00000593074 SLC51AQ86UW1 340 aa22.81■■□□□ 1.24
CLIP3-206ENST00000593074 TRIM22Q8IYM9 498 aa22.81■■□□□ 1.24
CLIP3-206ENST00000593074 FANCBQ8NB91 859 aa22.81■■□□□ 1.24
CLIP3-206ENST00000593074 DNAJC25Q9H1X3 360 aa22.81■■□□□ 1.24
CLIP3-206ENST00000593074 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.81■■□□□ 1.24
CLIP3-206ENST00000593074 CYP2D7A0A087X1C5 515 aa22.81■■□□□ 1.24
CLIP3-206ENST00000593074 ATP2B4P23634 1241 aa22.81■■□□□ 1.24
CLIP3-206ENST00000593074 ZNF165P49910 485 aa22.81■■□□□ 1.24
CLIP3-206ENST00000593074 NDUFA8P51970 172 aa22.81■■□□□ 1.24
CLIP3-206ENST00000593074 PPP2R5BQ15173 497 aa22.81■■□□□ 1.24
CLIP3-206ENST00000593074 STX1AQ16623 288 aa22.81■■□□□ 1.24
CLIP3-206ENST00000593074 CRNKL1Q9BZJ0 848 aaKnown RBP22.81■■□□□ 1.24
CLIP3-206ENST00000593074 JAG2Q9Y219 1238 aa22.81■■□□□ 1.24
CLIP3-206ENST00000593074 MYH2Q9UKX2 1941 aa22.81■■□□□ 1.24
CLIP3-206ENST00000593074 A0A1B0GVL5 298 aa22.8■■□□□ 1.24
CLIP3-206ENST00000593074 CRACR2BQ8N4Y2 399 aaPredicted RBP22.8■■□□□ 1.24
CLIP3-206ENST00000593074 ENAHQ8N8S7 591 aaPredicted RBP22.8■■□□□ 1.24
CLIP3-206ENST00000593074 CRAMP1Q96RY5 1269 aa22.8■■□□□ 1.24
CLIP3-206ENST00000593074 ZSCAN10Q96SZ4 725 aaPredicted RBP22.8■■□□□ 1.24
CLIP3-206ENST00000593074 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.8■■□□□ 1.24
CLIP3-206ENST00000593074 ATP8A2Q9NTI2 1148 aa22.8■■□□□ 1.24
CLIP3-206ENST00000593074 AATFQ9NY61 560 aaKnown RBP eCLIP22.8■■□□□ 1.24
CLIP3-206ENST00000593074 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.8■■□□□ 1.24
CLIP3-206ENST00000593074 DEXIO95424 95 aa22.8■■□□□ 1.24
CLIP3-206ENST00000593074 GUCY1A2P33402 732 aa22.8■■□□□ 1.24
CLIP3-206ENST00000593074 PLCB2Q00722 1185 aa22.8■■□□□ 1.24
CLIP3-206ENST00000593074 GNL2Q13823 731 aaKnown RBP22.8■■□□□ 1.24
CLIP3-206ENST00000593074 DZIP1Q86YF9 867 aaKnown RBP22.8■■□□□ 1.24
CLIP3-206ENST00000593074 DCP1AQ9NPI6 582 aaPredicted RBP22.8■■□□□ 1.24
CLIP3-206ENST00000593074 KLRG2A4D1S0 409 aaPredicted RBP22.79■■□□□ 1.24
CLIP3-206ENST00000593074 PPP6R2O75170 966 aa22.79■■□□□ 1.24
CLIP3-206ENST00000593074 MMP1P03956 469 aa22.79■■□□□ 1.24
CLIP3-206ENST00000593074 CMA1P23946 247 aa22.79■■□□□ 1.24
CLIP3-206ENST00000593074 NLGN1Q8N2Q7 840 aa22.79■■□□□ 1.24
CLIP3-206ENST00000593074 MAP3K14Q99558 947 aa22.79■■□□□ 1.24
CLIP3-206ENST00000593074 USP17L12C9JPN9 530 aa22.78■■□□□ 1.24
CLIP3-206ENST00000593074 USP17L21D6R901 530 aa22.78■■□□□ 1.24
CLIP3-206ENST00000593074 ORC4O43929 436 aa22.78■■□□□ 1.24
CLIP3-206ENST00000593074 PTPAQ15257 358 aa22.78■■□□□ 1.24
CLIP3-206ENST00000593074 AKT1S1Q96B36 256 aa22.78■■□□□ 1.24
CLIP3-206ENST00000593074 GGA1Q9UJY5 639 aa22.78■■□□□ 1.24
CLIP3-206ENST00000593074 UFL1O94874 794 aa22.78■■□□□ 1.24
CLIP3-206ENST00000593074 LDHBP07195 334 aaKnown RBP22.78■■□□□ 1.24
CLIP3-206ENST00000593074 ZNF827Q17R98 1081 aa22.78■■□□□ 1.24
CLIP3-206ENST00000593074 ARPP21Q9UBL0 812 aaPredicted RBP22.78■■□□□ 1.24
CLIP3-206ENST00000593074 SBK1Q52WX2 424 aa22.77■■□□□ 1.24
CLIP3-206ENST00000593074 IQCA1Q86XH1 822 aa22.77■■□□□ 1.24
CLIP3-206ENST00000593074 COL23A1Q86Y22 540 aaPredicted RBP22.77■■□□□ 1.24
CLIP3-206ENST00000593074 NOSTRINQ8IVI9 506 aa22.77■■□□□ 1.24
CLIP3-206ENST00000593074 NUP133Q8WUM0 1156 aa22.77■■□□□ 1.24
CLIP3-206ENST00000593074 GPR101Q96P66 508 aaPredicted RBP22.77■■□□□ 1.24
CLIP3-206ENST00000593074 MROH7-TTC4A0A0A0MT08 1334 aa22.77■■□□□ 1.24
CLIP3-206ENST00000593074 OFD1O75665 1012 aa22.77■■□□□ 1.23
CLIP3-206ENST00000593074 WDHD1O75717 1129 aaPredicted RBP22.77■■□□□ 1.23
CLIP3-206ENST00000593074 C11orf57Q6ZUT1 292 aaPredicted RBP22.77■■□□□ 1.23
CLIP3-206ENST00000593074 JMYQ8N9B5 988 aa22.77■■□□□ 1.23
CLIP3-206ENST00000593074 RNF26Q9BY78 433 aaPredicted RBP22.77■■□□□ 1.23
CLIP3-206ENST00000593074 IQCB1Q15051 598 aa22.76■■□□□ 1.23
CLIP3-206ENST00000593074 FLAD1Q8NFF5 587 aa22.76■■□□□ 1.23
CLIP3-206ENST00000593074 PODXL2Q9NZ53 605 aa22.76■■□□□ 1.23
CLIP3-206ENST00000593074 PRDM1O75626 825 aa22.75■■□□□ 1.23
CLIP3-206ENST00000593074 RXRBP28702 533 aa22.75■■□□□ 1.23
CLIP3-206ENST00000593074 GSTO1P78417 241 aa22.75■■□□□ 1.23
CLIP3-206ENST00000593074 SAFBQ15424 915 aaKnown RBP eCLIP22.75■■□□□ 1.23
CLIP3-206ENST00000593074 IFIT1BQ5T764 474 aaKnown RBP22.75■■□□□ 1.23
CLIP3-206ENST00000593074 TMC4Q7Z404 712 aa22.75■■□□□ 1.23
CLIP3-206ENST00000593074 FOXP1Q9H334 677 aaPredicted RBP22.75■■□□□ 1.23
CLIP3-206ENST00000593074 CD209Q9NNX6 404 aa22.75■■□□□ 1.23
CLIP3-206ENST00000593074 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.75■■□□□ 1.23
CLIP3-206ENST00000593074 ANO10Q9NW15 660 aa22.75■■□□□ 1.23
CLIP3-206ENST00000593074 PFKFB1P16118 471 aa22.75■■□□□ 1.23
CLIP3-206ENST00000593074 DIS3L2Q8IYB7 885 aaKnown RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms