RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 ZBTB3Q9H5J0 574 aa20.52■□□□□ 0.88
SPC24-206ENST00000592540 FAM217BQ9NTX9 383 aaPredicted RBP20.52■□□□□ 0.88
SPC24-206ENST00000592540 CDC23Q9UJX2 597 aa20.52■□□□□ 0.88
SPC24-206ENST00000592540 GOLGA8AA7E2F4 631 aa20.52■□□□□ 0.87
SPC24-206ENST00000592540 B4E1Z4 1266 aa20.52■□□□□ 0.87
SPC24-206ENST00000592540 TOB1P50616 345 aaPredicted RBP20.52■□□□□ 0.87
SPC24-206ENST00000592540 CEP112Q8N8E3 955 aa20.52■□□□□ 0.87
SPC24-206ENST00000592540 PUF60Q9UHX1 559 aaKnown RBP20.52■□□□□ 0.87
SPC24-206ENST00000592540 FBXO2Q9UK22 296 aaPredicted RBP20.52■□□□□ 0.87
SPC24-206ENST00000592540 MYO5AQ9Y4I1 1855 aaKnown RBP20.51■□□□□ 0.87
SPC24-206ENST00000592540 PTPREP23469 700 aa20.51■□□□□ 0.87
SPC24-206ENST00000592540 USP5P45974 858 aa20.51■□□□□ 0.87
SPC24-206ENST00000592540 RAD9BQ6WBX8 426 aa20.51■□□□□ 0.87
SPC24-206ENST00000592540 KRT28Q7Z3Y7 464 aa20.51■□□□□ 0.87
SPC24-206ENST00000592540 GRAMD1CQ8IYS0 662 aa20.51■□□□□ 0.87
SPC24-206ENST00000592540 IGDCC4Q8TDY8 1250 aa20.51■□□□□ 0.87
SPC24-206ENST00000592540 TMEM87BQ96K49 555 aa20.51■□□□□ 0.87
SPC24-206ENST00000592540 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.51■□□□□ 0.87
SPC24-206ENST00000592540 PDE11AQ9HCR9 933 aa20.51■□□□□ 0.87
SPC24-206ENST00000592540 RAB21Q9UL25 225 aa20.51■□□□□ 0.87
SPC24-206ENST00000592540 POTEB2H3BUK9 544 aa20.5■□□□□ 0.87
SPC24-206ENST00000592540 KIF5CO60282 957 aa20.5■□□□□ 0.87
SPC24-206ENST00000592540 PLCD1P51178 756 aa20.5■□□□□ 0.87
SPC24-206ENST00000592540 SLC9C2Q5TAH2 1124 aa20.5■□□□□ 0.87
SPC24-206ENST00000592540 NFXL1Q6ZNB6 911 aa20.5■□□□□ 0.87
SPC24-206ENST00000592540 HDXQ7Z353 690 aa20.5■□□□□ 0.87
SPC24-206ENST00000592540 MSANTD4Q8NCY6 345 aa20.5■□□□□ 0.87
SPC24-206ENST00000592540 MYL10Q9BUA6 226 aa20.5■□□□□ 0.87
SPC24-206ENST00000592540 SLC26A6Q9BXS9 759 aa20.5■□□□□ 0.87
SPC24-206ENST00000592540 STK36Q9NRP7 1315 aa20.5■□□□□ 0.87
SPC24-206ENST00000592540 A0A0U1RQJ8 604 aa20.5■□□□□ 0.87
SPC24-206ENST00000592540 BTBD18B2RXH4 712 aa20.5■□□□□ 0.87
SPC24-206ENST00000592540 TEX33O43247 280 aa20.5■□□□□ 0.87
SPC24-206ENST00000592540 ACTN2P35609 894 aa20.5■□□□□ 0.87
SPC24-206ENST00000592540 SSRP1Q08945 709 aaKnown RBP20.5■□□□□ 0.87
SPC24-206ENST00000592540 IQUBQ8NA54 791 aa20.5■□□□□ 0.87
SPC24-206ENST00000592540 ATRIPQ8WXE1 791 aa20.5■□□□□ 0.87
SPC24-206ENST00000592540 NAA15Q9BXJ9 866 aaKnown RBP20.5■□□□□ 0.87
SPC24-206ENST00000592540 LY9Q9HBG7 655 aa20.5■□□□□ 0.87
SPC24-206ENST00000592540 LCMT1Q9UIC8 334 aa20.5■□□□□ 0.87
SPC24-206ENST00000592540 FBXO3Q9UK99 471 aa20.5■□□□□ 0.87
SPC24-206ENST00000592540 MYH8P13535 1937 aa20.5■□□□□ 0.87
SPC24-206ENST00000592540 MYO1CO00159 1063 aa20.49■□□□□ 0.87
SPC24-206ENST00000592540 ADD2P35612 726 aa20.49■□□□□ 0.87
SPC24-206ENST00000592540 RBL2Q08999 1139 aa20.49■□□□□ 0.87
SPC24-206ENST00000592540 MCM6Q14566 821 aa20.49■□□□□ 0.87
SPC24-206ENST00000592540 SGMS1Q86VZ5 419 aa20.49■□□□□ 0.87
SPC24-206ENST00000592540 PNKPQ96T60 521 aa20.49■□□□□ 0.87
SPC24-206ENST00000592540 PKD1L3Q7Z443 1732 aa20.49■□□□□ 0.87
SPC24-206ENST00000592540 ERCC5P28715 1186 aaPredicted RBP20.49■□□□□ 0.87
SPC24-206ENST00000592540 MAPK8IP2Q13387 824 aaPredicted RBP20.49■□□□□ 0.87
SPC24-206ENST00000592540 APTXQ7Z2E3 356 aaKnown RBP20.49■□□□□ 0.87
SPC24-206ENST00000592540 RASSF4Q9H2L5 321 aa20.49■□□□□ 0.87
SPC24-206ENST00000592540 VPS18Q9P253 973 aa20.49■□□□□ 0.87
SPC24-206ENST00000592540 A1BGP04217 495 aa20.48■□□□□ 0.87
SPC24-206ENST00000592540 APPP05067 770 aa20.48■□□□□ 0.87
SPC24-206ENST00000592540 PPFIBP1Q86W92 1011 aa20.48■□□□□ 0.87
SPC24-206ENST00000592540 MSL3Q8N5Y2 521 aaKnown RBP20.48■□□□□ 0.87
SPC24-206ENST00000592540 SEC31BQ9NQW1 1179 aa20.48■□□□□ 0.87
SPC24-206ENST00000592540 CHD4Q14839 1912 aa20.48■□□□□ 0.87
SPC24-206ENST00000592540 ACTN4O43707 911 aaKnown RBP20.48■□□□□ 0.87
SPC24-206ENST00000592540 ERLIN1O75477 346 aa20.48■□□□□ 0.87
SPC24-206ENST00000592540 FMNL1O95466 1100 aaPredicted RBP20.48■□□□□ 0.87
SPC24-206ENST00000592540 MMP1P03956 469 aa20.48■□□□□ 0.87
SPC24-206ENST00000592540 MCAMP43121 646 aa20.48■□□□□ 0.87
SPC24-206ENST00000592540 TUBB2AQ13885 445 aa20.48■□□□□ 0.87
SPC24-206ENST00000592540 TMEM67Q5HYA8 995 aa20.48■□□□□ 0.87
SPC24-206ENST00000592540 ZNF569Q5MCW4 686 aa20.48■□□□□ 0.87
SPC24-206ENST00000592540 KANK3Q6NY19 840 aa20.48■□□□□ 0.87
SPC24-206ENST00000592540 IGSF22Q8N9C0 903 aa20.48■□□□□ 0.87
SPC24-206ENST00000592540 SPATA20Q8TB22 786 aa20.48■□□□□ 0.87
SPC24-206ENST00000592540 TUBB2BQ9BVA1 445 aa20.48■□□□□ 0.87
SPC24-206ENST00000592540 L1RE1Q9UN81 338 aa20.48■□□□□ 0.87
SPC24-206ENST00000592540 SAFBQ15424 915 aaKnown RBP eCLIP20.47■□□□□ 0.87
SPC24-206ENST00000592540 RASGRP2Q7LDG7 609 aa20.47■□□□□ 0.87
SPC24-206ENST00000592540 DIS3L2Q8IYB7 885 aaKnown RBP20.47■□□□□ 0.87
SPC24-206ENST00000592540 ZNF579Q8NAF0 562 aaKnown RBP20.47■□□□□ 0.87
SPC24-206ENST00000592540 CPLX3Q8WVH0 158 aa20.47■□□□□ 0.87
SPC24-206ENST00000592540 ATRNO75882 1429 aa20.47■□□□□ 0.87
SPC24-206ENST00000592540 PARP4Q9UKK3 1724 aaKnown RBP20.47■□□□□ 0.87
SPC24-206ENST00000592540 TRIM66O15016 1216 aa20.47■□□□□ 0.87
SPC24-206ENST00000592540 TUBB4BP68371 445 aa20.47■□□□□ 0.87
SPC24-206ENST00000592540 WASF1Q92558 559 aa20.47■□□□□ 0.87
SPC24-206ENST00000592540 ABCB6Q9NP58 842 aa20.47■□□□□ 0.87
SPC24-206ENST00000592540 EIF3JO75822 258 aaKnown RBP20.46■□□□□ 0.87
SPC24-206ENST00000592540 CSB-PGBD3P0DP91 1061 aa20.46■□□□□ 0.87
SPC24-206ENST00000592540 GUCY1A2P33402 732 aa20.46■□□□□ 0.87
SPC24-206ENST00000592540 PBX1P40424 430 aa20.46■□□□□ 0.87
SPC24-206ENST00000592540 KIF4BQ2VIQ3 1234 aa20.46■□□□□ 0.87
SPC24-206ENST00000592540 RILPL1Q5EBL4 403 aa20.46■□□□□ 0.87
SPC24-206ENST00000592540 SRLQ86TD4 932 aa20.46■□□□□ 0.87
SPC24-206ENST00000592540 ANKLE2Q86XL3 938 aa20.46■□□□□ 0.87
SPC24-206ENST00000592540 C10orf67Q8IYJ2 551 aa20.46■□□□□ 0.87
SPC24-206ENST00000592540 CCDC85AQ96PX6 553 aaPredicted RBP20.46■□□□□ 0.87
SPC24-206ENST00000592540 KCNJ14Q9UNX9 436 aa20.46■□□□□ 0.87
SPC24-206ENST00000592540 CTAGE9A4FU28 777 aa20.45■□□□□ 0.87
SPC24-206ENST00000592540 LIFRP42702 1097 aa20.45■□□□□ 0.87
SPC24-206ENST00000592540 SPATA1Q5VX52 437 aa20.45■□□□□ 0.87
SPC24-206ENST00000592540 SRPRBQ9Y5M8 271 aaKnown RBP20.45■□□□□ 0.87
SPC24-206ENST00000592540 SLC12A7Q9Y666 1083 aa20.45■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms