RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 TMC4Q7Z404 712 aa6.74□□□□□ -1.33
ERCC1-216ENST00000592444 GJD3Q8N144 294 aa6.74□□□□□ -1.33
ERCC1-216ENST00000592444 HERVK_113Q902F9 699 aa6.74□□□□□ -1.33
ERCC1-216ENST00000592444 SENP6Q9GZR1 1112 aaPredicted RBP6.74□□□□□ -1.33
ERCC1-216ENST00000592444 PRDM5Q9NQX1 630 aaPredicted RBP6.74□□□□□ -1.33
ERCC1-216ENST00000592444 RIF1Q5UIP0 2472 aaKnown RBP6.74□□□□□ -1.33
ERCC1-216ENST00000592444 DMXL1Q9Y485 3027 aa6.74□□□□□ -1.33
ERCC1-216ENST00000592444 LRRC37AA6NMS7 1700 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 ATRNL1Q5VV63 1379 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 MAST2Q6P0Q8 1798 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 RCCD1A6NED2 376 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 RNF223E7ERA6 249 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 PDHXO00330 501 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 TNPO2O14787 897 aaKnown RBP6.73□□□□□ -1.33
ERCC1-216ENST00000592444 KCNQ3O43525 872 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 SLC24A1O60721 1099 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 HMGCRP04035 888 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 BCRP11274 1271 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 EPHB4P54760 987 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 PRR20EP86478 221 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 PRR20CP86479 221 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 PRR20DP86480 221 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 PRR20BP86481 221 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 PRR20AP86496 221 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 SNAPC2Q13487 334 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 VGLL4Q14135 290 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 BLOC1S3Q6QNY0 202 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 CCDC129Q6ZRS4 1044 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 ZNF598Q86UK7 904 aaKnown RBP6.73□□□□□ -1.33
ERCC1-216ENST00000592444 NGEFQ8N5V2 710 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 ZKSCAN4Q969J2 545 aaPredicted RBP6.73□□□□□ -1.33
ERCC1-216ENST00000592444 PBX4Q9BYU1 374 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 COG5Q9UP83 839 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 PPP2R3BQ9Y5P8 575 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 MAP1BP46821 2468 aaKnown RBP6.73□□□□□ -1.33
ERCC1-216ENST00000592444 WDR87Q6ZQQ6 2873 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 CLSPNQ9HAW4 1339 aa6.73□□□□□ -1.33
ERCC1-216ENST00000592444 NUP98P52948 1817 aa6.72□□□□□ -1.33
ERCC1-216ENST00000592444 PSME4Q14997 1843 aa6.72□□□□□ -1.33
ERCC1-216ENST00000592444 FAM187AA6NFU0 413 aa6.72□□□□□ -1.33
ERCC1-216ENST00000592444 ACTN4O43707 911 aaKnown RBP6.72□□□□□ -1.33
ERCC1-216ENST00000592444 HCLS1P14317 486 aaPredicted RBP6.72□□□□□ -1.33
ERCC1-216ENST00000592444 SSTR3P32745 418 aaPredicted RBP6.72□□□□□ -1.33
ERCC1-216ENST00000592444 RTP1P59025 263 aa6.72□□□□□ -1.33
ERCC1-216ENST00000592444 KMT5BQ4FZB7 885 aa6.72□□□□□ -1.33
ERCC1-216ENST00000592444 TRIM67Q6ZTA4 783 aa6.72□□□□□ -1.33
ERCC1-216ENST00000592444 DGLUCYQ7Z3D6 616 aa6.72□□□□□ -1.33
ERCC1-216ENST00000592444 PPP1R42Q7Z4L9 355 aa6.72□□□□□ -1.33
ERCC1-216ENST00000592444 ZBED3Q96IU2 234 aaPredicted RBP6.72□□□□□ -1.33
ERCC1-216ENST00000592444 ATP11BQ9Y2G3 1177 aa6.72□□□□□ -1.33
ERCC1-216ENST00000592444 USP24Q9UPU5 2620 aa6.72□□□□□ -1.33
ERCC1-216ENST00000592444 FAM186AA6NE01 2351 aa6.72□□□□□ -1.33
ERCC1-216ENST00000592444 FAM208BQ5VWN6 2430 aa6.71□□□□□ -1.33
ERCC1-216ENST00000592444 COL4A6Q14031 1691 aa6.71□□□□□ -1.33
ERCC1-216ENST00000592444 PLXNA1Q9UIW2 1896 aa6.71□□□□□ -1.34
ERCC1-216ENST00000592444 GRXCR1A8MXD5 290 aa6.71□□□□□ -1.34
ERCC1-216ENST00000592444 ERVV-1B6SEH8 477 aa6.71□□□□□ -1.34
ERCC1-216ENST00000592444 IRF6O14896 467 aa6.71□□□□□ -1.34
ERCC1-216ENST00000592444 DCXO43602 365 aa6.71□□□□□ -1.34
ERCC1-216ENST00000592444 DACT2Q5SW24 774 aa6.71□□□□□ -1.34
ERCC1-216ENST00000592444 ANKRD23Q86SG2 305 aa6.71□□□□□ -1.34
ERCC1-216ENST00000592444 ZNF34Q8IZ26 560 aa6.71□□□□□ -1.34
ERCC1-216ENST00000592444 ATOH1Q92858 354 aaPredicted RBP6.71□□□□□ -1.34
ERCC1-216ENST00000592444 CELF1Q92879 486 aaKnown RBP6.71□□□□□ -1.34
ERCC1-216ENST00000592444 KCNH4Q9UQ05 1017 aa6.71□□□□□ -1.34
ERCC1-216ENST00000592444 CSADQ9Y600 493 aa6.71□□□□□ -1.34
ERCC1-216ENST00000592444 ZNF804BA4D1E1 1349 aa6.71□□□□□ -1.34
ERCC1-216ENST00000592444 VPS13AQ96RL7 3174 aa6.71□□□□□ -1.34
ERCC1-216ENST00000592444 ASH1LQ9NR48 2969 aaKnown RBP6.7□□□□□ -1.34
ERCC1-216ENST00000592444 ANKRD36CQ5JPF3 1778 aa6.7□□□□□ -1.34
ERCC1-216ENST00000592444 CLRN2A0PK11 232 aa6.7□□□□□ -1.34
ERCC1-216ENST00000592444 TRIM43BA6NCK2 446 aa6.7□□□□□ -1.34
ERCC1-216ENST00000592444 SPDYE5A6NIY4 337 aa6.7□□□□□ -1.34
ERCC1-216ENST00000592444 SEMA3EO15041 775 aa6.7□□□□□ -1.34
ERCC1-216ENST00000592444 UFL1O94874 794 aa6.7□□□□□ -1.34
ERCC1-216ENST00000592444 CFHP08603 1231 aa6.7□□□□□ -1.34
ERCC1-216ENST00000592444 CYP2C8P10632 490 aa6.7□□□□□ -1.34
ERCC1-216ENST00000592444 TEFQ10587 303 aa6.7□□□□□ -1.34
ERCC1-216ENST00000592444 SH3RF1Q7Z6J0 888 aa6.7□□□□□ -1.34
ERCC1-216ENST00000592444 FAM178BQ8IXR5 827 aa6.7□□□□□ -1.34
ERCC1-216ENST00000592444 HLA-CQ95604 372 aa6.7□□□□□ -1.34
ERCC1-216ENST00000592444 TRIM43Q96BQ3 446 aaPredicted RBP6.7□□□□□ -1.34
ERCC1-216ENST00000592444 PRRX2Q99811 253 aa6.7□□□□□ -1.34
ERCC1-216ENST00000592444 UTP14AQ9BVJ6 771 aaKnown RBP6.7□□□□□ -1.34
ERCC1-216ENST00000592444 ZBTB3Q9H5J0 574 aa6.7□□□□□ -1.34
ERCC1-216ENST00000592444 MAP3K15Q6ZN16 1313 aa6.7□□□□□ -1.34
ERCC1-216ENST00000592444 ASPMQ8IZT6 3477 aa6.69□□□□□ -1.34
ERCC1-216ENST00000592444 ZIC2O95409 532 aaPredicted RBP6.69□□□□□ -1.34
ERCC1-216ENST00000592444 RASA3Q14644 834 aa6.69□□□□□ -1.34
ERCC1-216ENST00000592444 TREML4Q6UXN2 200 aa6.69□□□□□ -1.34
ERCC1-216ENST00000592444 TTLL7Q6ZT98 887 aa6.69□□□□□ -1.34
ERCC1-216ENST00000592444 ERO1BQ86YB8 467 aa6.69□□□□□ -1.34
ERCC1-216ENST00000592444 KIAA0825Q8IV33 1275 aa6.69□□□□□ -1.34
ERCC1-216ENST00000592444 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.69□□□□□ -1.34
ERCC1-216ENST00000592444 COA7Q96BR5 231 aa6.69□□□□□ -1.34
ERCC1-216ENST00000592444 RMDN1Q96DB5 314 aa6.69□□□□□ -1.34
ERCC1-216ENST00000592444 VEZTQ9HBM0 779 aa6.69□□□□□ -1.34
ERCC1-216ENST00000592444 SH2B1Q9NRF2 756 aaPredicted RBP6.69□□□□□ -1.34
ERCC1-216ENST00000592444 DOCK3Q8IZD9 2030 aa6.69□□□□□ -1.34
ERCC1-216ENST00000592444 CEMIPQ8WUJ3 1361 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms