RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.26■□□□□ 0.51
MBD1-227ENST00000592060 MAP3K14Q99558 947 aa18.26■□□□□ 0.51
MBD1-227ENST00000592060 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.26■□□□□ 0.51
MBD1-227ENST00000592060 LRRC4BQ9NT99 713 aa18.26■□□□□ 0.51
MBD1-227ENST00000592060 PCP11498 1178 aaKnown RBP18.26■□□□□ 0.51
MBD1-227ENST00000592060 GRAPQ13588 217 aa18.26■□□□□ 0.51
MBD1-227ENST00000592060 TMED8Q6PL24 325 aaPredicted RBP18.26■□□□□ 0.51
MBD1-227ENST00000592060 MPNDQ8N594 471 aa18.26■□□□□ 0.51
MBD1-227ENST00000592060 GRAPLQ8TC17 118 aaPredicted RBP18.26■□□□□ 0.51
MBD1-227ENST00000592060 NAP1L5Q96NT1 182 aaPredicted RBP18.26■□□□□ 0.51
MBD1-227ENST00000592060 WDHD1O75717 1129 aaPredicted RBP18.25■□□□□ 0.51
MBD1-227ENST00000592060 PRDX5P30044 214 aa18.25■□□□□ 0.51
MBD1-227ENST00000592060 MEX3CQ5U5Q3 659 aaKnown RBP18.25■□□□□ 0.51
MBD1-227ENST00000592060 SLC51AQ86UW1 340 aa18.25■□□□□ 0.51
MBD1-227ENST00000592060 CRACR2BQ8N4Y2 399 aaPredicted RBP18.25■□□□□ 0.51
MBD1-227ENST00000592060 FANCBQ8NB91 859 aa18.25■□□□□ 0.51
MBD1-227ENST00000592060 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.25■□□□□ 0.51
MBD1-227ENST00000592060 CCDC196A0A1B0GTZ2 297 aa18.24■□□□□ 0.51
MBD1-227ENST00000592060 PPP6R2O75170 966 aa18.24■□□□□ 0.51
MBD1-227ENST00000592060 ADRA2BP18089 450 aa18.24■□□□□ 0.51
MBD1-227ENST00000592060 CMA1P23946 247 aa18.24■□□□□ 0.51
MBD1-227ENST00000592060 CHAF1AQ13111 956 aaPredicted RBP18.24■□□□□ 0.51
MBD1-227ENST00000592060 PLA2G4DQ86XP0 818 aa18.24■□□□□ 0.51
MBD1-227ENST00000592060 SEPT12Q8IYM1 358 aa18.24■□□□□ 0.51
MBD1-227ENST00000592060 TRIM22Q8IYM9 498 aa18.24■□□□□ 0.51
MBD1-227ENST00000592060 ENAHQ8N8S7 591 aaPredicted RBP18.24■□□□□ 0.51
MBD1-227ENST00000592060 BCL11BQ9C0K0 894 aaPredicted RBP18.24■□□□□ 0.51
MBD1-227ENST00000592060 DEXIO95424 95 aa18.24■□□□□ 0.51
MBD1-227ENST00000592060 MMP1P03956 469 aa18.24■□□□□ 0.51
MBD1-227ENST00000592060 KIAA2012Q0VF49 1180 aa18.24■□□□□ 0.51
MBD1-227ENST00000592060 CNBD1Q8NA66 436 aa18.24■□□□□ 0.51
MBD1-227ENST00000592060 ZNF830Q96NB3 372 aaPredicted RBP18.24■□□□□ 0.51
MBD1-227ENST00000592060 ZSCAN10Q96SZ4 725 aaPredicted RBP18.24■□□□□ 0.51
MBD1-227ENST00000592060 TTC12Q9H892 705 aaPredicted RBP18.24■□□□□ 0.51
MBD1-227ENST00000592060 GNL2Q13823 731 aaKnown RBP18.23■□□□□ 0.51
MBD1-227ENST00000592060 CRNKL1Q9BZJ0 848 aaKnown RBP18.23■□□□□ 0.51
MBD1-227ENST00000592060 DCP1AQ9NPI6 582 aaPredicted RBP18.23■□□□□ 0.51
MBD1-227ENST00000592060 AATFQ9NY61 560 aaKnown RBP eCLIP18.23■□□□□ 0.51
MBD1-227ENST00000592060 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.23■□□□□ 0.51
MBD1-227ENST00000592060 USP17L12C9JPN9 530 aa18.22■□□□□ 0.51
MBD1-227ENST00000592060 USP17L21D6R901 530 aa18.22■□□□□ 0.51
MBD1-227ENST00000592060 ORC4O43929 436 aa18.22■□□□□ 0.51
MBD1-227ENST00000592060 PFKFB1P16118 471 aa18.22■□□□□ 0.51
MBD1-227ENST00000592060 ZNF75DP51815 510 aa18.22■□□□□ 0.51
MBD1-227ENST00000592060 PPP2R5BQ15173 497 aa18.22■□□□□ 0.51
MBD1-227ENST00000592060 POTEAQ6S8J7 498 aa18.22■□□□□ 0.51
MBD1-227ENST00000592060 NUP133Q8WUM0 1156 aa18.22■□□□□ 0.51
MBD1-227ENST00000592060 ANO10Q9NW15 660 aa18.22■□□□□ 0.51
MBD1-227ENST00000592060 LEMD3Q9Y2U8 911 aa18.22■□□□□ 0.51
MBD1-227ENST00000592060 FAM237AA0A1B0GTK4 181 aa18.22■□□□□ 0.51
MBD1-227ENST00000592060 NPHP1O15259 732 aa18.22■□□□□ 0.51
MBD1-227ENST00000592060 MARCKSP29966 332 aaPredicted RBP18.22■□□□□ 0.51
MBD1-227ENST00000592060 EVX2Q03828 476 aa18.22■□□□□ 0.51
MBD1-227ENST00000592060 PRR5LQ6MZQ0 368 aa18.22■□□□□ 0.51
MBD1-227ENST00000592060 NOSTRINQ8IVI9 506 aa18.22■□□□□ 0.51
MBD1-227ENST00000592060 KCNF1Q9H3M0 494 aa18.22■□□□□ 0.51
MBD1-227ENST00000592060 ATP8A2Q9NTI2 1148 aa18.22■□□□□ 0.51
MBD1-227ENST00000592060 TRPC5Q9UL62 973 aaPredicted RBP18.22■□□□□ 0.51
MBD1-227ENST00000592060 HPSEQ9Y251 543 aa18.22■□□□□ 0.51
MBD1-227ENST00000592060 NAV1Q8NEY1 1877 aa18.21■□□□□ 0.51
MBD1-227ENST00000592060 A0A087WWV3 80 aa18.21■□□□□ 0.51
MBD1-227ENST00000592060 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.21■□□□□ 0.51
MBD1-227ENST00000592060 ZNF202O95125 648 aa18.21■□□□□ 0.51
MBD1-227ENST00000592060 TPM3P06753 285 aa18.21■□□□□ 0.51
MBD1-227ENST00000592060 FUT2Q10981 343 aa18.21■□□□□ 0.51
MBD1-227ENST00000592060 SBK1Q52WX2 424 aa18.21■□□□□ 0.51
MBD1-227ENST00000592060 SARM1Q6SZW1 724 aa18.21■□□□□ 0.51
MBD1-227ENST00000592060 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.21■□□□□ 0.51
MBD1-227ENST00000592060 DIS3L2Q8IYB7 885 aaKnown RBP18.21■□□□□ 0.51
MBD1-227ENST00000592060 CMTR1Q8N1G2 835 aaKnown RBP18.21■□□□□ 0.51
MBD1-227ENST00000592060 JMYQ8N9B5 988 aa18.21■□□□□ 0.51
MBD1-227ENST00000592060 PIBF1Q8WXW3 757 aa18.21■□□□□ 0.51
MBD1-227ENST00000592060 SDF4Q9BRK5 362 aa18.21■□□□□ 0.51
MBD1-227ENST00000592060 RNF26Q9BY78 433 aaPredicted RBP18.21■□□□□ 0.51
MBD1-227ENST00000592060 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.21■□□□□ 0.51
MBD1-227ENST00000592060 KCNJ14Q9UNX9 436 aa18.21■□□□□ 0.51
MBD1-227ENST00000592060 XDHP47989 1333 aa18.21■□□□□ 0.51
MBD1-227ENST00000592060 BRWD3Q6RI45 1802 aa18.21■□□□□ 0.51
MBD1-227ENST00000592060 BTBD18B2RXH4 712 aa18.21■□□□□ 0.5
MBD1-227ENST00000592060 IGSF3O75054 1194 aa18.21■□□□□ 0.5
MBD1-227ENST00000592060 PRDM1O75626 825 aa18.21■□□□□ 0.5
MBD1-227ENST00000592060 SPTY2D1Q68D10 685 aaPredicted RBP18.21■□□□□ 0.5
MBD1-227ENST00000592060 C15orf52Q6ZUT6 534 aaKnown RBP18.21■□□□□ 0.5
MBD1-227ENST00000592060 DHX40Q8IX18 779 aaKnown RBP18.21■□□□□ 0.5
MBD1-227ENST00000592060 SPC24Q8NBT2 197 aa18.21■□□□□ 0.5
MBD1-227ENST00000592060 ERCC4Q92889 916 aaPredicted RBP18.21■□□□□ 0.5
MBD1-227ENST00000592060 FOXP1Q9H334 677 aaPredicted RBP18.21■□□□□ 0.5
MBD1-227ENST00000592060 KIAA1468Q9P260 1216 aa18.21■□□□□ 0.5
MBD1-227ENST00000592060 ARPP21Q9UBL0 812 aaPredicted RBP18.21■□□□□ 0.5
MBD1-227ENST00000592060 TAOK2Q9UL54 1235 aa18.21■□□□□ 0.5
MBD1-227ENST00000592060 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.2■□□□□ 0.5
MBD1-227ENST00000592060 GOLGA6L6A8MZA4 724 aa18.2■□□□□ 0.5
MBD1-227ENST00000592060 IFIT1BQ5T764 474 aaKnown RBP18.2■□□□□ 0.5
MBD1-227ENST00000592060 SHC4Q6S5L8 630 aa18.2■□□□□ 0.5
MBD1-227ENST00000592060 SHISA4Q96DD7 197 aa18.2■□□□□ 0.5
MBD1-227ENST00000592060 TIGD1Q96MW7 591 aa18.2■□□□□ 0.5
MBD1-227ENST00000592060 JAG2Q9Y219 1238 aa18.2■□□□□ 0.5
MBD1-227ENST00000592060 CDK5RAP2Q96SN8 1893 aa18.2■□□□□ 0.5
MBD1-227ENST00000592060 LRRC37AA6NMS7 1700 aa18.19■□□□□ 0.5
MBD1-227ENST00000592060 GYS1P13807 737 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms